RNA–Protein interactions for RNA: ENST00000379268.6

TNFRSF18-203, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 1,179 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-203ENST00000379268 CHD4Q14839 1912 aa28.57■■■□□ 2.16
TNFRSF18-203ENST00000379268 CC2D1BQ5T0F9 858 aaKnown RBP28.57■■■□□ 2.16
TNFRSF18-203ENST00000379268 KDM6AO15550 1401 aaPredicted RBP28.56■■■□□ 2.16
TNFRSF18-203ENST00000379268 SSFA2P28290 1259 aa28.56■■■□□ 2.16
TNFRSF18-203ENST00000379268 CABP4P57796 275 aa28.56■■■□□ 2.16
TNFRSF18-203ENST00000379268 ITPK1Q13572 414 aa28.56■■■□□ 2.16
TNFRSF18-203ENST00000379268 MSL1Q68DK7 614 aa28.56■■■□□ 2.16
TNFRSF18-203ENST00000379268 NPC1L1Q9UHC9 1359 aa28.56■■■□□ 2.16
TNFRSF18-203ENST00000379268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.55■■■□□ 2.16
TNFRSF18-203ENST00000379268 AMIGO3Q86WK7 504 aa28.55■■■□□ 2.16
TNFRSF18-203ENST00000379268 ZNF831Q5JPB2 1677 aa28.54■■■□□ 2.16
TNFRSF18-203ENST00000379268 UTRNP46939 3433 aa28.54■■■□□ 2.16
TNFRSF18-203ENST00000379268 GPR162Q16538 588 aa28.54■■■□□ 2.16
TNFRSF18-203ENST00000379268 PHF14O94880 888 aa28.53■■■□□ 2.16
TNFRSF18-203ENST00000379268 GNPATO15228 680 aa28.51■■■□□ 2.15
TNFRSF18-203ENST00000379268 DIAPH1O60610 1272 aaKnown RBP28.5■■■□□ 2.15
TNFRSF18-203ENST00000379268 NLGN2Q8NFZ4 835 aa28.5■■■□□ 2.15
TNFRSF18-203ENST00000379268 RBM42Q9BTD8 480 aaKnown RBP28.5■■■□□ 2.15
TNFRSF18-203ENST00000379268 CD2APQ9Y5K6 639 aa28.49■■■□□ 2.15
TNFRSF18-203ENST00000379268 SCN11AQ9UI33 1791 aa28.49■■■□□ 2.15
TNFRSF18-203ENST00000379268 AKAP4Q5JQC9 854 aa28.48■■■□□ 2.15
TNFRSF18-203ENST00000379268 SMIM5Q71RC9 77 aa28.48■■■□□ 2.15
TNFRSF18-203ENST00000379268 NFATC2IPQ8NCF5 419 aa28.48■■■□□ 2.15
TNFRSF18-203ENST00000379268 SLC4A9Q96Q91 983 aa28.48■■■□□ 2.15
TNFRSF18-203ENST00000379268 RC3H1Q5TC82 1133 aaKnown RBP28.47■■■□□ 2.15
TNFRSF18-203ENST00000379268 HMOX1P09601 288 aa28.46■■■□□ 2.15
TNFRSF18-203ENST00000379268 RTCBQ9Y3I0 505 aaKnown RBP28.45■■■□□ 2.14
TNFRSF18-203ENST00000379268 COL5A3P25940 1745 aaPredicted RBP28.45■■■□□ 2.14
TNFRSF18-203ENST00000379268 PELP1Q8IZL8 1130 aaKnown RBP28.44■■■□□ 2.14
TNFRSF18-203ENST00000379268 TRAPPC3LQ5T215 181 aa28.43■■■□□ 2.14
TNFRSF18-203ENST00000379268 CNTNAP4Q9C0A0 1308 aa28.43■■■□□ 2.14
TNFRSF18-203ENST00000379268 ADRA2BP18089 450 aa28.42■■■□□ 2.14
TNFRSF18-203ENST00000379268 PTCD1O75127 700 aaKnown RBP28.41■■■□□ 2.14
TNFRSF18-203ENST00000379268 GOLGB1Q14789 3259 aaKnown RBP28.4■■■□□ 2.14
TNFRSF18-203ENST00000379268 GRIN3BO60391 1043 aa28.4■■■□□ 2.14
TNFRSF18-203ENST00000379268 RPS6KA4O75676 772 aa28.4■■■□□ 2.14
TNFRSF18-203ENST00000379268 CNGB1Q14028 1251 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF18-203ENST00000379268 SLC52A2Q9HAB3 445 aa28.4■■■□□ 2.14
TNFRSF18-203ENST00000379268 VIRMAQ69YN4 1812 aaKnown RBP28.4■■■□□ 2.14
TNFRSF18-203ENST00000379268 MYH14Q7Z406 1995 aaKnown RBP28.4■■■□□ 2.14
TNFRSF18-203ENST00000379268 ZNF784Q8NCA9 323 aaPredicted RBP28.39■■■□□ 2.14
TNFRSF18-203ENST00000379268 COL3A1P02461 1466 aaPredicted RBP28.39■■■□□ 2.13
TNFRSF18-203ENST00000379268 MTHFSDQ2M296 383 aaKnown RBP28.38■■■□□ 2.13
TNFRSF18-203ENST00000379268 LGR6Q9HBX8 967 aa28.38■■■□□ 2.13
TNFRSF18-203ENST00000379268 RNMTO43148 476 aaKnown RBP28.37■■■□□ 2.13
TNFRSF18-203ENST00000379268 NLGN1Q8N2Q7 840 aa28.37■■■□□ 2.13
TNFRSF18-203ENST00000379268 YBX3P16989 372 aaKnown RBP eCLIP28.36■■■□□ 2.13
TNFRSF18-203ENST00000379268 ARHGEF1Q92888 912 aaKnown RBP28.36■■■□□ 2.13
TNFRSF18-203ENST00000379268 CICQ96RK0 1608 aaPredicted RBP28.36■■■□□ 2.13
TNFRSF18-203ENST00000379268 U2SURPO15042 1029 aaKnown RBP28.35■■■□□ 2.13
TNFRSF18-203ENST00000379268 MRC1P22897 1456 aa28.34■■■□□ 2.13
TNFRSF18-203ENST00000379268 RFC4P35249 363 aa28.34■■■□□ 2.13
TNFRSF18-203ENST00000379268 ADAMTS7Q9UKP4 1686 aa28.33■■■□□ 2.13
TNFRSF18-203ENST00000379268 MMP10P09238 476 aa28.33■■■□□ 2.13
TNFRSF18-203ENST00000379268 CRKLP46109 303 aaKnown RBP28.33■■■□□ 2.13
TNFRSF18-203ENST00000379268 CFAP53Q96M91 514 aa28.32■■■□□ 2.12
TNFRSF18-203ENST00000379268 TJP1Q07157 1748 aa28.32■■■□□ 2.12
TNFRSF18-203ENST00000379268 GYS1P13807 737 aa28.29■■■□□ 2.12
TNFRSF18-203ENST00000379268 GAS2L2Q8NHY3 880 aa28.29■■■□□ 2.12
TNFRSF18-203ENST00000379268 C4AP0C0L4 1744 aa28.29■■■□□ 2.12
TNFRSF18-203ENST00000379268 SLC39A6Q13433 755 aa28.27■■■□□ 2.12
TNFRSF18-203ENST00000379268 INTS5Q6P9B9 1019 aaKnown RBP28.26■■■□□ 2.11
TNFRSF18-203ENST00000379268 DNAJC10Q8IXB1 793 aa28.26■■■□□ 2.11
TNFRSF18-203ENST00000379268 NUDCQ9Y266 331 aa28.26■■■□□ 2.11
TNFRSF18-203ENST00000379268 KIF13BQ9NQT8 1826 aa28.25■■■□□ 2.11
TNFRSF18-203ENST00000379268 GNAT3A8MTJ3 354 aa28.25■■■□□ 2.11
TNFRSF18-203ENST00000379268 PPP2R1AP30153 589 aa28.24■■■□□ 2.11
TNFRSF18-203ENST00000379268 VSIG10Q8N0Z9 540 aa28.24■■■□□ 2.11
TNFRSF18-203ENST00000379268 CCDC87Q9NVE4 849 aa28.24■■■□□ 2.11
TNFRSF18-203ENST00000379268 PARP3Q9Y6F1 533 aa28.23■■■□□ 2.11
TNFRSF18-203ENST00000379268 KCPQ6ZWJ8 1503 aa28.23■■■□□ 2.11
TNFRSF18-203ENST00000379268 USP42Q9H9J4 1324 aaKnown RBP28.22■■■□□ 2.11
TNFRSF18-203ENST00000379268 CYP19A1P11511 503 aaPredicted RBP28.22■■■□□ 2.11
TNFRSF18-203ENST00000379268 TGFB2P61812 414 aa28.22■■■□□ 2.11
TNFRSF18-203ENST00000379268 TEFQ10587 303 aa28.21■■■□□ 2.11
TNFRSF18-203ENST00000379268 IL17REQ8NFR9 667 aa28.21■■■□□ 2.11
TNFRSF18-203ENST00000379268 UBR2Q8IWV8 1755 aa28.21■■■□□ 2.11
TNFRSF18-203ENST00000379268 PRKAR2BP31323 418 aa28.2■■■□□ 2.1
TNFRSF18-203ENST00000379268 TTC5Q8N0Z6 440 aa28.2■■■□□ 2.1
TNFRSF18-203ENST00000379268 RSPH6AQ9H0K4 717 aa28.2■■■□□ 2.1
TNFRSF18-203ENST00000379268 C10orf71Q711Q0 1435 aa28.19■■■□□ 2.1
TNFRSF18-203ENST00000379268 SRP68Q9UHB9 627 aaKnown RBP28.19■■■□□ 2.1
TNFRSF18-203ENST00000379268 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
TNFRSF18-203ENST00000379268 PHACTR3Q96KR7 559 aa28.18■■■□□ 2.1
TNFRSF18-203ENST00000379268 PXDNLA1KZ92 1463 aa28.17■■■□□ 2.1
TNFRSF18-203ENST00000379268 ZPR1O75312 459 aa28.17■■■□□ 2.1
TNFRSF18-203ENST00000379268 FKBP8Q14318 412 aa28.17■■■□□ 2.1
TNFRSF18-203ENST00000379268 SIPA1L3O60292 1781 aaPredicted RBP28.16■■■□□ 2.1
TNFRSF18-203ENST00000379268 KIAA1551Q9HCM1 1747 aa28.16■■■□□ 2.1
TNFRSF18-203ENST00000379268 FCHSD2O94868 740 aa28.16■■■□□ 2.1
TNFRSF18-203ENST00000379268 U2AF1L5P0DN76 240 aaPredicted RBP28.16■■■□□ 2.1
TNFRSF18-203ENST00000379268 U2AF1Q01081 240 aaKnown RBP eCLIP28.16■■■□□ 2.1
TNFRSF18-203ENST00000379268 WWC3Q9ULE0 1092 aa28.16■■■□□ 2.1
TNFRSF18-203ENST00000379268 N4BP2Q86UW6 1770 aaPredicted RBP28.15■■■□□ 2.1
TNFRSF18-203ENST00000379268 ZNF790Q6PG37 636 aa28.15■■■□□ 2.1
TNFRSF18-203ENST00000379268 CEMIPQ8WUJ3 1361 aa28.14■■■□□ 2.1
TNFRSF18-203ENST00000379268 STARD3NLO95772 234 aa28.14■■■□□ 2.1
TNFRSF18-203ENST00000379268 ZBTB1Q9Y2K1 713 aa28.14■■■□□ 2.1
TNFRSF18-203ENST00000379268 TEX13AQ9BXU3 409 aaPredicted RBP28.13■■■□□ 2.09
TNFRSF18-203ENST00000379268 NARFQ9UHQ1 456 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms