RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 MSL1Q68DK7 614 aa18.91■□□□□ 0.62
PCNA-202ENST00000379160 PELP1Q8IZL8 1130 aaKnown RBP18.91■□□□□ 0.62
PCNA-202ENST00000379160 ZNF784Q8NCA9 323 aaPredicted RBP18.9■□□□□ 0.62
PCNA-202ENST00000379160 NLGN2Q8NFZ4 835 aa18.9■□□□□ 0.62
PCNA-202ENST00000379160 PIGBQ92521 554 aa18.9■□□□□ 0.62
PCNA-202ENST00000379160 NKX1-1Q15270 411 aaPredicted RBP18.89■□□□□ 0.61
PCNA-202ENST00000379160 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
PCNA-202ENST00000379160 SMARCC1Q92922 1105 aaPredicted RBP18.89■□□□□ 0.61
PCNA-202ENST00000379160 PANK3Q9H999 370 aa18.89■□□□□ 0.61
PCNA-202ENST00000379160 EIF4A2Q14240 407 aaKnown RBP18.88■□□□□ 0.61
PCNA-202ENST00000379160 C4BP0C0L5 1744 aa18.87■□□□□ 0.61
PCNA-202ENST00000379160 HMGB2P26583 209 aaKnown RBP18.86■□□□□ 0.61
PCNA-202ENST00000379160 AK7Q96M32 723 aa18.86■□□□□ 0.61
PCNA-202ENST00000379160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.86■□□□□ 0.615e-8■□□□□ 9.8
PCNA-202ENST00000379160 TMOD3Q9NYL9 352 aa18.86■□□□□ 0.61
PCNA-202ENST00000379160 PHKG2P15735 406 aa18.85■□□□□ 0.61
PCNA-202ENST00000379160 IFNL2Q8IZJ0 200 aa18.85■□□□□ 0.61
PCNA-202ENST00000379160 FLAD1Q8NFF5 587 aa18.85■□□□□ 0.61
PCNA-202ENST00000379160 PHF14O94880 888 aa18.84■□□□□ 0.61
PCNA-202ENST00000379160 SMIM5Q71RC9 77 aa18.84■□□□□ 0.61
PCNA-202ENST00000379160 AMIGO3Q86WK7 504 aa18.84■□□□□ 0.61
PCNA-202ENST00000379160 LOC102724428A0A0B4J2F2 783 aa18.83■□□□□ 0.61
PCNA-202ENST00000379160 SIK1P57059 783 aa18.83■□□□□ 0.61
PCNA-202ENST00000379160 ASAP1Q9ULH1 1129 aa18.83■□□□□ 0.61
PCNA-202ENST00000379160 UBR3Q6ZT12 1888 aa18.82■□□□□ 0.6
PCNA-202ENST00000379160 LINC00116Q8NCU8 138 aa18.81■□□□□ 0.6
PCNA-202ENST00000379160 IGSF1Q8N6C5 1336 aa18.81■□□□□ 0.6
PCNA-202ENST00000379160 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.81■□□□□ 0.6
PCNA-202ENST00000379160 YBX3P16989 372 aaKnown RBP eCLIP18.8■□□□□ 0.62e-8■■■□□ 14.6
PCNA-202ENST00000379160 ATP6V1AP38606 617 aa18.8■□□□□ 0.6
PCNA-202ENST00000379160 MORC1Q86VD1 984 aa18.8■□□□□ 0.6
PCNA-202ENST00000379160 ITPK1Q13572 414 aa18.79■□□□□ 0.6
PCNA-202ENST00000379160 ATG3Q9NT62 314 aa18.79■□□□□ 0.6
PCNA-202ENST00000379160 GNPATO15228 680 aa18.77■□□□□ 0.6
PCNA-202ENST00000379160 SSFA2P28290 1259 aa18.77■□□□□ 0.6
PCNA-202ENST00000379160 PLEKHO1Q53GL0 409 aaPredicted RBP18.77■□□□□ 0.6
PCNA-202ENST00000379160 KNSTRNQ9Y448 316 aa18.77■□□□□ 0.6
PCNA-202ENST00000379160 CD2APQ9Y5K6 639 aa18.77■□□□□ 0.6
PCNA-202ENST00000379160 GRIN3BO60391 1043 aa18.76■□□□□ 0.59
PCNA-202ENST00000379160 AEBP1Q8IUX7 1158 aa18.76■□□□□ 0.59
PCNA-202ENST00000379160 PLEKHG2Q9H7P9 1386 aa18.75■□□□□ 0.59
PCNA-202ENST00000379160 ERVV-2B6SEH9 535 aa18.75■□□□□ 0.59
PCNA-202ENST00000379160 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
PCNA-202ENST00000379160 DCAF5Q96JK2 942 aa18.75■□□□□ 0.59
PCNA-202ENST00000379160 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
PCNA-202ENST00000379160 AMOTQ4VCS5 1084 aa18.73■□□□□ 0.59
PCNA-202ENST00000379160 CABP4P57796 275 aa18.72■□□□□ 0.59
PCNA-202ENST00000379160 SULT6B1Q6IMI4 303 aa18.72■□□□□ 0.59
PCNA-202ENST00000379160 SLC4A9Q96Q91 983 aa18.72■□□□□ 0.59
PCNA-202ENST00000379160 WWC3Q9ULE0 1092 aa18.72■□□□□ 0.59
PCNA-202ENST00000379160 KDRP35968 1356 aa18.72■□□□□ 0.59
PCNA-202ENST00000379160 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
PCNA-202ENST00000379160 MTHFSP49914 203 aa18.71■□□□□ 0.59
PCNA-202ENST00000379160 C1orf141Q5JVX7 400 aa18.71■□□□□ 0.59
PCNA-202ENST00000379160 C1QTNF8P60827 252 aa18.7■□□□□ 0.58
PCNA-202ENST00000379160 IL13P35225 146 aa18.69■□□□□ 0.58
PCNA-202ENST00000379160 TRAPPC3LQ5T215 181 aa18.69■□□□□ 0.58
PCNA-202ENST00000379160 RTCBQ9Y3I0 505 aaKnown RBP18.69■□□□□ 0.58
PCNA-202ENST00000379160 KIF7Q2M1P5 1343 aa18.69■□□□□ 0.58
PCNA-202ENST00000379160 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
PCNA-202ENST00000379160 COL5A3P25940 1745 aaPredicted RBP18.68■□□□□ 0.58
PCNA-202ENST00000379160 ZNF831Q5JPB2 1677 aa18.68■□□□□ 0.58
PCNA-202ENST00000379160 GIGYF1O75420 1035 aaPredicted RBP18.68■□□□□ 0.58
PCNA-202ENST00000379160 MMP10P09238 476 aa18.68■□□□□ 0.58
PCNA-202ENST00000379160 NFATC2IPQ8NCF5 419 aa18.68■□□□□ 0.58
PCNA-202ENST00000379160 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
PCNA-202ENST00000379160 PTCD1O75127 700 aaKnown RBP18.67■□□□□ 0.58
PCNA-202ENST00000379160 ARHGEF1Q92888 912 aaKnown RBP18.66■□□□□ 0.58
PCNA-202ENST00000379160 CNTNAP4Q9C0A0 1308 aa18.65■□□□□ 0.58
PCNA-202ENST00000379160 RC3H1Q5TC82 1133 aaKnown RBP18.65■□□□□ 0.58
PCNA-202ENST00000379160 MYH14Q7Z406 1995 aaKnown RBP18.65■□□□□ 0.58
PCNA-202ENST00000379160 RPS6KA4O75676 772 aa18.64■□□□□ 0.57
PCNA-202ENST00000379160 RFC4P35249 363 aa18.64■□□□□ 0.57
PCNA-202ENST00000379160 CC2D1BQ5T0F9 858 aaKnown RBP18.64■□□□□ 0.57
PCNA-202ENST00000379160 SCN11AQ9UI33 1791 aa18.63■□□□□ 0.57
PCNA-202ENST00000379160 HMOX1P09601 288 aa18.63■□□□□ 0.57
PCNA-202ENST00000379160 NLGN1Q8N2Q7 840 aa18.63■□□□□ 0.57
PCNA-202ENST00000379160 ATP10DQ9P241 1426 aa18.63■□□□□ 0.57
PCNA-202ENST00000379160 CICQ96RK0 1608 aaPredicted RBP18.63■□□□□ 0.57
PCNA-202ENST00000379160 PER1O15534 1290 aaPredicted RBP18.61■□□□□ 0.57
PCNA-202ENST00000379160 GYS1P13807 737 aa18.61■□□□□ 0.57
PCNA-202ENST00000379160 CRKLP46109 303 aaKnown RBP18.61■□□□□ 0.57
PCNA-202ENST00000379160 CNGB1Q14028 1251 aaPredicted RBP18.61■□□□□ 0.57
PCNA-202ENST00000379160 AKAP4Q5JQC9 854 aa18.61■□□□□ 0.57
PCNA-202ENST00000379160 C4AP0C0L4 1744 aa18.61■□□□□ 0.57
PCNA-202ENST00000379160 N4BP2Q86UW6 1770 aaPredicted RBP18.6■□□□□ 0.57
PCNA-202ENST00000379160 REM2Q8IYK8 340 aaPredicted RBP18.6■□□□□ 0.57
PCNA-202ENST00000379160 SPDYE1Q8NFV5 336 aaPredicted RBP18.6■□□□□ 0.57
PCNA-202ENST00000379160 LGR6Q9HBX8 967 aa18.6■□□□□ 0.57
PCNA-202ENST00000379160 FBXO3Q9UK99 471 aa18.6■□□□□ 0.57
PCNA-202ENST00000379160 KIF13BQ9NQT8 1826 aa18.6■□□□□ 0.57
PCNA-202ENST00000379160 TJP1Q07157 1748 aa18.59■□□□□ 0.57
PCNA-202ENST00000379160 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
PCNA-202ENST00000379160 PXDNLA1KZ92 1463 aa18.59■□□□□ 0.57
PCNA-202ENST00000379160 VIRMAQ69YN4 1812 aaKnown RBP18.59■□□□□ 0.57
PCNA-202ENST00000379160 A0A0G2JLW4 131 aa18.58■□□□□ 0.57
PCNA-202ENST00000379160 DIAPH1O60610 1272 aaKnown RBP18.58■□□□□ 0.57
PCNA-202ENST00000379160 SLC52A2Q9HAB3 445 aa18.58■□□□□ 0.57
PCNA-202ENST00000379160 GPBP1L1Q9HC44 474 aaPredicted RBP18.58■□□□□ 0.57
PCNA-202ENST00000379160 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms