RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 AK7Q96M32 723 aa25.68■■□□□ 1.7
TMEM88B-201ENST00000378821 MSH5O43196 834 aa25.67■■□□□ 1.7
TMEM88B-201ENST00000378821 SSFA2P28290 1259 aa25.66■■□□□ 1.7
TMEM88B-201ENST00000378821 SCN11AQ9UI33 1791 aa25.65■■□□□ 1.7
TMEM88B-201ENST00000378821 ATP6V1AP38606 617 aa25.65■■□□□ 1.7
TMEM88B-201ENST00000378821 CC2D1BQ5T0F9 858 aaKnown RBP25.65■■□□□ 1.7
TMEM88B-201ENST00000378821 SLC4A9Q96Q91 983 aa25.65■■□□□ 1.7
TMEM88B-201ENST00000378821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.64■■□□□ 1.7
TMEM88B-201ENST00000378821 C1orf141Q5JVX7 400 aa25.64■■□□□ 1.7
TMEM88B-201ENST00000378821 CHD4Q14839 1912 aa25.64■■□□□ 1.69
TMEM88B-201ENST00000378821 COL5A3P25940 1745 aaPredicted RBP25.63■■□□□ 1.69
TMEM88B-201ENST00000378821 CABP4P57796 275 aa25.62■■□□□ 1.69
TMEM88B-201ENST00000378821 MSL1Q68DK7 614 aa25.62■■□□□ 1.69
TMEM88B-201ENST00000378821 ZEB1P37275 1124 aaPredicted RBP25.61■■□□□ 1.69
TMEM88B-201ENST00000378821 NLGN2Q8NFZ4 835 aa25.61■■□□□ 1.69
TMEM88B-201ENST00000378821 COL3A1P02461 1466 aaPredicted RBP25.6■■□□□ 1.69
TMEM88B-201ENST00000378821 CICQ96RK0 1608 aaPredicted RBP25.6■■□□□ 1.69
TMEM88B-201ENST00000378821 UTRNP46939 3433 aa25.6■■□□□ 1.69
TMEM88B-201ENST00000378821 DIAPH1O60610 1272 aaKnown RBP25.6■■□□□ 1.69
TMEM88B-201ENST00000378821 AKAP4Q5JQC9 854 aa25.6■■□□□ 1.69
TMEM88B-201ENST00000378821 RC3H1Q5TC82 1133 aaKnown RBP25.6■■□□□ 1.69
TMEM88B-201ENST00000378821 SMIM5Q71RC9 77 aa25.6■■□□□ 1.69
TMEM88B-201ENST00000378821 NFATC2IPQ8NCF5 419 aa25.59■■□□□ 1.69
TMEM88B-201ENST00000378821 CD2APQ9Y5K6 639 aa25.59■■□□□ 1.69
TMEM88B-201ENST00000378821 ADAMTS7Q9UKP4 1686 aa25.58■■□□□ 1.69
TMEM88B-201ENST00000378821 GNPATO15228 680 aa25.58■■□□□ 1.69
TMEM88B-201ENST00000378821 PHF14O94880 888 aa25.57■■□□□ 1.68
TMEM88B-201ENST00000378821 CNTNAP4Q9C0A0 1308 aa25.57■■□□□ 1.68
TMEM88B-201ENST00000378821 MRC1P22897 1456 aa25.56■■□□□ 1.68
TMEM88B-201ENST00000378821 KLHL34Q8N239 644 aa25.56■■□□□ 1.68
TMEM88B-201ENST00000378821 RBM42Q9BTD8 480 aaKnown RBP25.56■■□□□ 1.68
TMEM88B-201ENST00000378821 VIRMAQ69YN4 1812 aaKnown RBP25.56■■□□□ 1.68
TMEM88B-201ENST00000378821 MYH14Q7Z406 1995 aaKnown RBP25.55■■□□□ 1.68
TMEM88B-201ENST00000378821 HMOX1P09601 288 aa25.55■■□□□ 1.68
TMEM88B-201ENST00000378821 GPR162Q16538 588 aa25.55■■□□□ 1.68
TMEM88B-201ENST00000378821 ADRA2BP18089 450 aa25.53■■□□□ 1.68
TMEM88B-201ENST00000378821 LGR6Q9HBX8 967 aa25.53■■□□□ 1.68
TMEM88B-201ENST00000378821 RTCBQ9Y3I0 505 aaKnown RBP25.53■■□□□ 1.68
TMEM88B-201ENST00000378821 TJP1Q07157 1748 aa25.52■■□□□ 1.68
TMEM88B-201ENST00000378821 MTHFSDQ2M296 383 aaKnown RBP25.52■■□□□ 1.68
TMEM88B-201ENST00000378821 SLC52A2Q9HAB3 445 aa25.52■■□□□ 1.68
TMEM88B-201ENST00000378821 RNMTO43148 476 aaKnown RBP25.51■■□□□ 1.67
TMEM88B-201ENST00000378821 RPS6KA4O75676 772 aa25.51■■□□□ 1.67
TMEM88B-201ENST00000378821 TRAPPC3LQ5T215 181 aa25.51■■□□□ 1.67
TMEM88B-201ENST00000378821 GOLGB1Q14789 3259 aaKnown RBP25.5■■□□□ 1.67
TMEM88B-201ENST00000378821 PTCD1O75127 700 aaKnown RBP25.49■■□□□ 1.67
TMEM88B-201ENST00000378821 YBX3P16989 372 aaKnown RBP eCLIP25.49■■□□□ 1.67
TMEM88B-201ENST00000378821 ZNF784Q8NCA9 323 aaPredicted RBP25.49■■□□□ 1.67
TMEM88B-201ENST00000378821 ARHGEF1Q92888 912 aaKnown RBP25.49■■□□□ 1.67
TMEM88B-201ENST00000378821 C4AP0C0L4 1744 aa25.47■■□□□ 1.67
TMEM88B-201ENST00000378821 KIF13BQ9NQT8 1826 aa25.47■■□□□ 1.67
TMEM88B-201ENST00000378821 GRIN3BO60391 1043 aa25.46■■□□□ 1.67
TMEM88B-201ENST00000378821 NLGN1Q8N2Q7 840 aa25.46■■□□□ 1.67
TMEM88B-201ENST00000378821 CRKLP46109 303 aaKnown RBP25.45■■□□□ 1.66
TMEM88B-201ENST00000378821 CNGB1Q14028 1251 aaPredicted RBP25.45■■□□□ 1.66
TMEM88B-201ENST00000378821 KCPQ6ZWJ8 1503 aa25.44■■□□□ 1.66
TMEM88B-201ENST00000378821 MMP10P09238 476 aa25.43■■□□□ 1.66
TMEM88B-201ENST00000378821 GYS1P13807 737 aa25.43■■□□□ 1.66
TMEM88B-201ENST00000378821 INTS5Q6P9B9 1019 aaKnown RBP25.43■■□□□ 1.66
TMEM88B-201ENST00000378821 UBR2Q8IWV8 1755 aa25.43■■□□□ 1.66
TMEM88B-201ENST00000378821 U2SURPO15042 1029 aaKnown RBP25.42■■□□□ 1.66
TMEM88B-201ENST00000378821 PELP1Q8IZL8 1130 aaKnown RBP25.42■■□□□ 1.66
TMEM88B-201ENST00000378821 PPP2R1AP30153 589 aa25.41■■□□□ 1.66
TMEM88B-201ENST00000378821 RFC4P35249 363 aa25.41■■□□□ 1.66
TMEM88B-201ENST00000378821 KIAA1551Q9HCM1 1747 aa25.4■■□□□ 1.66
TMEM88B-201ENST00000378821 VSIG10Q8N0Z9 540 aa25.4■■□□□ 1.66
TMEM88B-201ENST00000378821 GAS2L2Q8NHY3 880 aa25.4■■□□□ 1.66
TMEM88B-201ENST00000378821 CFAP53Q96M91 514 aa25.4■■□□□ 1.66
TMEM88B-201ENST00000378821 SIPA1L3O60292 1781 aaPredicted RBP25.4■■□□□ 1.66
TMEM88B-201ENST00000378821 SLC39A6Q13433 755 aa25.39■■□□□ 1.66
TMEM88B-201ENST00000378821 IL17REQ8NFR9 667 aa25.39■■□□□ 1.66
TMEM88B-201ENST00000378821 RSPH6AQ9H0K4 717 aa25.39■■□□□ 1.66
TMEM88B-201ENST00000378821 GNAT3A8MTJ3 354 aa25.38■■□□□ 1.65
TMEM88B-201ENST00000378821 CYP19A1P11511 503 aaPredicted RBP25.38■■□□□ 1.65
TMEM88B-201ENST00000378821 DNAJC10Q8IXB1 793 aa25.38■■□□□ 1.65
TMEM88B-201ENST00000378821 CCDC87Q9NVE4 849 aa25.37■■□□□ 1.65
TMEM88B-201ENST00000378821 C10orf71Q711Q0 1435 aa25.37■■□□□ 1.65
TMEM88B-201ENST00000378821 USP42Q9H9J4 1324 aaKnown RBP25.37■■□□□ 1.65
TMEM88B-201ENST00000378821 CEMIPQ8WUJ3 1361 aa25.36■■□□□ 1.65
TMEM88B-201ENST00000378821 PHACTR3Q96KR7 559 aa25.36■■□□□ 1.65
TMEM88B-201ENST00000378821 TGFB2P61812 414 aa25.35■■□□□ 1.65
TMEM88B-201ENST00000378821 SOS1Q07889 1333 aaPredicted RBP25.35■■□□□ 1.65
TMEM88B-201ENST00000378821 PXDNLA1KZ92 1463 aa25.34■■□□□ 1.65
TMEM88B-201ENST00000378821 NUDCQ9Y266 331 aa25.34■■□□□ 1.65
TMEM88B-201ENST00000378821 PRKAR2BP31323 418 aa25.33■■□□□ 1.65
TMEM88B-201ENST00000378821 FCHSD2O94868 740 aa25.32■■□□□ 1.64
TMEM88B-201ENST00000378821 DDX10Q13206 875 aaKnown RBP25.32■■□□□ 1.64
TMEM88B-201ENST00000378821 SRP68Q9UHB9 627 aaKnown RBP25.32■■□□□ 1.64
TMEM88B-201ENST00000378821 FKBP8Q14318 412 aa25.31■■□□□ 1.64
TMEM88B-201ENST00000378821 PARP3Q9Y6F1 533 aa25.31■■□□□ 1.64
TMEM88B-201ENST00000378821 N4BP2Q86UW6 1770 aaPredicted RBP25.31■■□□□ 1.64
TMEM88B-201ENST00000378821 TM4SF1P30408 202 aa25.3■■□□□ 1.64
TMEM88B-201ENST00000378821 TEFQ10587 303 aa25.3■■□□□ 1.64
TMEM88B-201ENST00000378821 ZNF790Q6PG37 636 aa25.3■■□□□ 1.64
TMEM88B-201ENST00000378821 BRCA1P38398 1863 aaKnown RBP25.3■■□□□ 1.64
TMEM88B-201ENST00000378821 U2AF1L5P0DN76 240 aaPredicted RBP25.28■■□□□ 1.64
TMEM88B-201ENST00000378821 U2AF1Q01081 240 aaKnown RBP eCLIP25.28■■□□□ 1.64
TMEM88B-201ENST00000378821 TTC5Q8N0Z6 440 aa25.28■■□□□ 1.64
TMEM88B-201ENST00000378821 ZNF496Q96IT1 587 aaPredicted RBP25.28■■□□□ 1.64
TMEM88B-201ENST00000378821 NARFQ9UHQ1 456 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms