RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 PDZRN3Q9UPQ7 1066 aa19.46■□□□□ 0.71
RAB3IP-204ENST00000378815 SMC5Q8IY18 1101 aa19.45■□□□□ 0.7
RAB3IP-204ENST00000378815 WDR17Q8IZU2 1322 aa19.45■□□□□ 0.7
RAB3IP-204ENST00000378815 COL5A2P05997 1499 aaPredicted RBP19.44■□□□□ 0.7
RAB3IP-204ENST00000378815 KCNQ3O43525 872 aa19.44■□□□□ 0.7
RAB3IP-204ENST00000378815 PHKG2P15735 406 aa19.44■□□□□ 0.7
RAB3IP-204ENST00000378815 KDM6AO15550 1401 aaPredicted RBP19.43■□□□□ 0.7
RAB3IP-204ENST00000378815 HDGFL1Q5TGJ6 251 aa19.43■□□□□ 0.7
RAB3IP-204ENST00000378815 VIRMAQ69YN4 1812 aaKnown RBP19.43■□□□□ 0.7
RAB3IP-204ENST00000378815 FLIIQ13045 1269 aa19.42■□□□□ 0.7
RAB3IP-204ENST00000378815 SIPA1L3O60292 1781 aaPredicted RBP19.42■□□□□ 0.7
RAB3IP-204ENST00000378815 PKD1L3Q7Z443 1732 aa19.42■□□□□ 0.7
RAB3IP-204ENST00000378815 NECTIN2Q92692 538 aa19.42■□□□□ 0.7
RAB3IP-204ENST00000378815 C1orf115Q9H7X2 142 aa19.42■□□□□ 0.7
RAB3IP-204ENST00000378815 IFNL2Q8IZJ0 200 aa19.41■□□□□ 0.7
RAB3IP-204ENST00000378815 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
RAB3IP-204ENST00000378815 HEG1Q9ULI3 1381 aa19.41■□□□□ 0.7
RAB3IP-204ENST00000378815 FAM161AQ3B820 660 aa19.41■□□□□ 0.7
RAB3IP-204ENST00000378815 ROBO1Q9Y6N7 1651 aa19.41■□□□□ 0.7
RAB3IP-204ENST00000378815 AHDC1Q5TGY3 1603 aaPredicted RBP19.4■□□□□ 0.7
RAB3IP-204ENST00000378815 CYP27B1O15528 508 aa19.4■□□□□ 0.7
RAB3IP-204ENST00000378815 C8orf34Q49A92 452 aa19.4■□□□□ 0.7
RAB3IP-204ENST00000378815 TOM1L2Q6ZVM7 507 aa19.4■□□□□ 0.7
RAB3IP-204ENST00000378815 SIRT2Q8IXJ6 389 aa19.4■□□□□ 0.7
RAB3IP-204ENST00000378815 F6X3S4 739 aa19.39■□□□□ 0.69
RAB3IP-204ENST00000378815 CCT4P50991 539 aaKnown RBP19.39■□□□□ 0.69
RAB3IP-204ENST00000378815 SLC52A2Q9HAB3 445 aa19.39■□□□□ 0.69
RAB3IP-204ENST00000378815 CACNA1FO60840 1977 aa19.39■□□□□ 0.69
RAB3IP-204ENST00000378815 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.69
RAB3IP-204ENST00000378815 DCAF5Q96JK2 942 aa19.38■□□□□ 0.69
RAB3IP-204ENST00000378815 CARD10Q9BWT7 1032 aa19.38■□□□□ 0.69
RAB3IP-204ENST00000378815 FKBP5Q13451 457 aaPredicted RBP19.37■□□□□ 0.69
RAB3IP-204ENST00000378815 MRC1P22897 1456 aa19.37■□□□□ 0.69
RAB3IP-204ENST00000378815 GIGYF1O75420 1035 aaPredicted RBP19.37■□□□□ 0.69
RAB3IP-204ENST00000378815 HSP90AB1P08238 724 aaKnown RBP19.36■□□□□ 0.69
RAB3IP-204ENST00000378815 EIF2S2P20042 333 aaKnown RBP19.36■□□□□ 0.69
RAB3IP-204ENST00000378815 SLC4A10Q6U841 1118 aa19.36■□□□□ 0.69
RAB3IP-204ENST00000378815 PARP4Q9UKK3 1724 aaKnown RBP19.36■□□□□ 0.69
RAB3IP-204ENST00000378815 NUCB1Q02818 461 aa19.36■□□□□ 0.69
RAB3IP-204ENST00000378815 GCC1Q96CN9 775 aa19.36■□□□□ 0.69
RAB3IP-204ENST00000378815 MEIS3Q99687 375 aa19.36■□□□□ 0.69
RAB3IP-204ENST00000378815 ATP10DQ9P241 1426 aa19.36■□□□□ 0.69
RAB3IP-204ENST00000378815 CHPF2Q9P2E5 772 aa19.35■□□□□ 0.69
RAB3IP-204ENST00000378815 PXDNLA1KZ92 1463 aa19.35■□□□□ 0.69
RAB3IP-204ENST00000378815 ZNF790Q6PG37 636 aa19.34■□□□□ 0.69
RAB3IP-204ENST00000378815 LARP1Q6PKG0 1096 aaKnown RBP19.34■□□□□ 0.69
RAB3IP-204ENST00000378815 NFATC2IPQ8NCF5 419 aa19.34■□□□□ 0.69
RAB3IP-204ENST00000378815 PHAXQ9H814 394 aaKnown RBP19.34■□□□□ 0.69
RAB3IP-204ENST00000378815 STRN4Q9NRL3 753 aa19.34■□□□□ 0.69
RAB3IP-204ENST00000378815 COL22A1Q8NFW1 1626 aaPredicted RBP19.33■□□□□ 0.69
RAB3IP-204ENST00000378815 EVA1CP58658 441 aa19.33■□□□□ 0.69
RAB3IP-204ENST00000378815 RPAP2Q8IXW5 612 aaPredicted RBP19.33■□□□□ 0.69
RAB3IP-204ENST00000378815 ANKRD44Q8N8A2 993 aa19.33■□□□□ 0.69
RAB3IP-204ENST00000378815 ZCRB1Q8TBF4 217 aaKnown RBP19.33■□□□□ 0.69
RAB3IP-204ENST00000378815 IL2RBP14784 551 aa19.33■□□□□ 0.68
RAB3IP-204ENST00000378815 PCDH11XQ9BZA7 1347 aa19.33■□□□□ 0.68
RAB3IP-204ENST00000378815 PCDH11YQ9BZA8 1340 aa19.33■□□□□ 0.68
RAB3IP-204ENST00000378815 DBF4Q9UBU7 674 aaPredicted RBP19.32■□□□□ 0.68
RAB3IP-204ENST00000378815 CEP85Q6P2H3 762 aa19.32■□□□□ 0.68
RAB3IP-204ENST00000378815 CHD1LQ86WJ1 897 aa19.32■□□□□ 0.68
RAB3IP-204ENST00000378815 ANP32AP39687 249 aaKnown RBP19.31■□□□□ 0.68
RAB3IP-204ENST00000378815 SLC39A6Q13433 755 aa19.31■□□□□ 0.68
RAB3IP-204ENST00000378815 N4BP2Q86UW6 1770 aaPredicted RBP19.31■□□□□ 0.68
RAB3IP-204ENST00000378815 PRAMEF22A3QJZ6 481 aa19.3■□□□□ 0.68
RAB3IP-204ENST00000378815 DCTPP1Q9H773 170 aa19.29■□□□□ 0.68
RAB3IP-204ENST00000378815 BTG4Q9NY30 223 aa19.29■□□□□ 0.68
RAB3IP-204ENST00000378815 COL14A1Q05707 1796 aaKnown RBP19.28■□□□□ 0.68
RAB3IP-204ENST00000378815 CABP4P57796 275 aa19.28■□□□□ 0.68
RAB3IP-204ENST00000378815 NKX1-1Q15270 411 aaPredicted RBP19.28■□□□□ 0.68
RAB3IP-204ENST00000378815 LNPKQ9C0E8 428 aa19.28■□□□□ 0.68
RAB3IP-204ENST00000378815 MSH5O43196 834 aa19.27■□□□□ 0.68
RAB3IP-204ENST00000378815 ANXA1P04083 346 aa19.27■□□□□ 0.68
RAB3IP-204ENST00000378815 GNAI3P08754 354 aa19.27■□□□□ 0.68
RAB3IP-204ENST00000378815 ANKRD45Q5TZF3 282 aa19.27■□□□□ 0.68
RAB3IP-204ENST00000378815 GNAI2P04899 355 aa19.27■□□□□ 0.67
RAB3IP-204ENST00000378815 PROSER3Q2NL68 480 aa19.27■□□□□ 0.67
RAB3IP-204ENST00000378815 ZNF496Q96IT1 587 aaPredicted RBP19.27■□□□□ 0.67
RAB3IP-204ENST00000378815 COL16A1Q07092 1604 aaPredicted RBP19.27■□□□□ 0.67
RAB3IP-204ENST00000378815 PI4KAP2A4QPH2 592 aa19.26■□□□□ 0.67
RAB3IP-204ENST00000378815 PI4KAP1Q8N8J0 262 aa19.26■□□□□ 0.67
RAB3IP-204ENST00000378815 HYPKQ9NX55 129 aa19.26■□□□□ 0.67
RAB3IP-204ENST00000378815 ADCY9O60503 1353 aa19.25■□□□□ 0.67
RAB3IP-204ENST00000378815 SHANK3Q9BYB0 1731 aa19.25■□□□□ 0.67
RAB3IP-204ENST00000378815 ERVV-2B6SEH9 535 aa19.25■□□□□ 0.67
RAB3IP-204ENST00000378815 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
RAB3IP-204ENST00000378815 TTC5Q8N0Z6 440 aa19.25■□□□□ 0.67
RAB3IP-204ENST00000378815 DNAAF4Q8WXU2 420 aa19.25■□□□□ 0.67
RAB3IP-204ENST00000378815 USP44Q9H0E7 712 aa19.25■□□□□ 0.67
RAB3IP-204ENST00000378815 DDX21Q9NR30 783 aaKnown RBP eCLIP19.25■□□□□ 0.67
RAB3IP-204ENST00000378815 PDIA6Q15084 440 aa19.25■□□□□ 0.67
RAB3IP-204ENST00000378815 BEND3Q5T5X7 828 aa19.24■□□□□ 0.67
RAB3IP-204ENST00000378815 SRCIN1Q9C0H9 1055 aa19.24■□□□□ 0.67
RAB3IP-204ENST00000378815 C5P01031 1676 aa19.24■□□□□ 0.67
RAB3IP-204ENST00000378815 FMNL2Q96PY5 1086 aa19.24■□□□□ 0.67
RAB3IP-204ENST00000378815 HMMRO75330 724 aa19.23■□□□□ 0.67
RAB3IP-204ENST00000378815 SNRPA1P09661 255 aaKnown RBP19.23■□□□□ 0.67
RAB3IP-204ENST00000378815 IPO9Q96P70 1041 aaKnown RBP19.23■□□□□ 0.67
RAB3IP-204ENST00000378815 PHLPP1O60346 1717 aa19.23■□□□□ 0.67
RAB3IP-204ENST00000378815 USP35Q9P2H5 1018 aa19.22■□□□□ 0.67
RAB3IP-204ENST00000378815 KSR2Q6VAB6 950 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms