RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 ZNF853P0CG23 659 aa20.52■□□□□ 0.88
CCDC107-204ENST00000378409 TAF7Q15545 349 aaPredicted RBP20.51■□□□□ 0.87
CCDC107-204ENST00000378409 ONECUT3O60422 494 aaPredicted RBP20.5■□□□□ 0.87
CCDC107-204ENST00000378409 RBM6P78332 1123 aaKnown RBP20.5■□□□□ 0.87
CCDC107-204ENST00000378409 MARCH10Q8NA82 808 aaPredicted RBP20.5■□□□□ 0.87
CCDC107-204ENST00000378409 MBIPQ9NS73 344 aa20.5■□□□□ 0.87
CCDC107-204ENST00000378409 CHL1O00533 1208 aa20.49■□□□□ 0.87
CCDC107-204ENST00000378409 SEPT12Q8IYM1 358 aa20.49■□□□□ 0.87
CCDC107-204ENST00000378409 SLC52A2Q9HAB3 445 aa20.49■□□□□ 0.87
CCDC107-204ENST00000378409 MIS18AQ9NYP9 233 aa20.49■□□□□ 0.87
CCDC107-204ENST00000378409 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
CCDC107-204ENST00000378409 CABP4P57796 275 aa20.48■□□□□ 0.87
CCDC107-204ENST00000378409 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
CCDC107-204ENST00000378409 BTBD11A6QL63 1104 aa20.46■□□□□ 0.87
CCDC107-204ENST00000378409 RXRBP28702 533 aa20.46■□□□□ 0.87
CCDC107-204ENST00000378409 NFATC2IPQ8NCF5 419 aa20.46■□□□□ 0.87
CCDC107-204ENST00000378409 BABAM1Q9NWV8 329 aa20.46■□□□□ 0.87
CCDC107-204ENST00000378409 SBF2Q86WG5 1849 aa20.46■□□□□ 0.87
CCDC107-204ENST00000378409 PAPPAQ13219 1627 aa20.45■□□□□ 0.87
CCDC107-204ENST00000378409 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
CCDC107-204ENST00000378409 TMOD3Q9NYL9 352 aa20.43■□□□□ 0.86
CCDC107-204ENST00000378409 UBR2Q8IWV8 1755 aa20.43■□□□□ 0.86
CCDC107-204ENST00000378409 SYTL4Q96C24 671 aaPredicted RBP20.41■□□□□ 0.86
CCDC107-204ENST00000378409 ACSBG1Q96GR2 724 aa20.41■□□□□ 0.86
CCDC107-204ENST00000378409 NHSQ6T4R5 1651 aa20.41■□□□□ 0.86
CCDC107-204ENST00000378409 KCNQ3O43525 872 aa20.4■□□□□ 0.86
CCDC107-204ENST00000378409 SLC39A6Q13433 755 aa20.4■□□□□ 0.86
CCDC107-204ENST00000378409 FAM182BQ5T319 152 aa20.4■□□□□ 0.86
CCDC107-204ENST00000378409 BCL9O00512 1426 aa20.39■□□□□ 0.85
CCDC107-204ENST00000378409 RGS12O14924 1447 aa20.39■□□□□ 0.85
CCDC107-204ENST00000378409 PRIM1P49642 420 aaKnown RBP20.39■□□□□ 0.85
CCDC107-204ENST00000378409 KRT24Q2M2I5 525 aa20.39■□□□□ 0.85
CCDC107-204ENST00000378409 KRT27Q7Z3Y8 459 aa20.39■□□□□ 0.85
CCDC107-204ENST00000378409 C8orf58Q8NAV2 365 aa20.39■□□□□ 0.85
CCDC107-204ENST00000378409 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
CCDC107-204ENST00000378409 ZNF790Q6PG37 636 aa20.38■□□□□ 0.85
CCDC107-204ENST00000378409 RCAN3Q9UKA8 241 aa20.38■□□□□ 0.85
CCDC107-204ENST00000378409 BTAF1O14981 1849 aa20.38■□□□□ 0.85
CCDC107-204ENST00000378409 C5P01031 1676 aa20.38■□□□□ 0.85
CCDC107-204ENST00000378409 CT47B1P0C2W7 299 aaPredicted RBP20.37■□□□□ 0.85
CCDC107-204ENST00000378409 EIF4A1P60842 406 aaKnown RBP20.37■□□□□ 0.85
CCDC107-204ENST00000378409 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
CCDC107-204ENST00000378409 TTC5Q8N0Z6 440 aa20.37■□□□□ 0.85
CCDC107-204ENST00000378409 TSPYL6Q8N831 410 aa20.37■□□□□ 0.85
CCDC107-204ENST00000378409 PIGBQ92521 554 aa20.37■□□□□ 0.85
CCDC107-204ENST00000378409 UPF1Q92900 1129 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCDC107-204ENST00000378409 LAMB4A4D0S4 1761 aa20.35■□□□□ 0.85
CCDC107-204ENST00000378409 CACNA1FO60840 1977 aa20.34■□□□□ 0.85
CCDC107-204ENST00000378409 KCPQ6ZWJ8 1503 aa20.34■□□□□ 0.85
CCDC107-204ENST00000378409 KCNQ2O43526 872 aa20.33■□□□□ 0.85
CCDC107-204ENST00000378409 VAMP4O75379 141 aa20.33■□□□□ 0.85
CCDC107-204ENST00000378409 ASAP1Q9ULH1 1129 aa20.33■□□□□ 0.85
CCDC107-204ENST00000378409 ZNF496Q96IT1 587 aaPredicted RBP20.32■□□□□ 0.84
CCDC107-204ENST00000378409 FMNL2Q96PY5 1086 aa20.32■□□□□ 0.84
CCDC107-204ENST00000378409 ATG3Q9NT62 314 aa20.32■□□□□ 0.84
CCDC107-204ENST00000378409 RARSP54136 660 aaKnown RBP20.31■□□□□ 0.84
CCDC107-204ENST00000378409 FAM196AQ6ZSG2 479 aa20.31■□□□□ 0.84
CCDC107-204ENST00000378409 SUPT16HQ9Y5B9 1047 aaKnown RBP20.31■□□□□ 0.84
CCDC107-204ENST00000378409 HEG1Q9ULI3 1381 aa20.31■□□□□ 0.84
CCDC107-204ENST00000378409 SOS1Q07889 1333 aaPredicted RBP20.3■□□□□ 0.84
CCDC107-204ENST00000378409 PTCD1O75127 700 aaKnown RBP20.3■□□□□ 0.84
CCDC107-204ENST00000378409 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
CCDC107-204ENST00000378409 HOXB7P09629 217 aa20.29■□□□□ 0.84
CCDC107-204ENST00000378409 ZNF428Q96B54 188 aa20.29■□□□□ 0.84
CCDC107-204ENST00000378409 BCL2L13Q9BXK5 485 aa20.29■□□□□ 0.84
CCDC107-204ENST00000378409 BCAR3O75815 825 aa20.28■□□□□ 0.84
CCDC107-204ENST00000378409 PTF1AQ7RTS3 328 aa20.28■□□□□ 0.84
CCDC107-204ENST00000378409 SSH1Q8WYL5 1049 aa20.28■□□□□ 0.84
CCDC107-204ENST00000378409 SMC4Q9NTJ3 1288 aa20.28■□□□□ 0.84
CCDC107-204ENST00000378409 TJP1Q07157 1748 aa20.27■□□□□ 0.84
CCDC107-204ENST00000378409 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
CCDC107-204ENST00000378409 SNRPA1P09661 255 aaKnown RBP20.27■□□□□ 0.84
CCDC107-204ENST00000378409 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
CCDC107-204ENST00000378409 NECTIN2Q92692 538 aa20.27■□□□□ 0.84
CCDC107-204ENST00000378409 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
CCDC107-204ENST00000378409 PRAMEF22A3QJZ6 481 aa20.26■□□□□ 0.83
CCDC107-204ENST00000378409 EIF2S2P20042 333 aaKnown RBP20.26■□□□□ 0.83
CCDC107-204ENST00000378409 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
CCDC107-204ENST00000378409 SMARCC1Q92922 1105 aaPredicted RBP20.26■□□□□ 0.83
CCDC107-204ENST00000378409 LY75O60449 1722 aa20.25■□□□□ 0.83
CCDC107-204ENST00000378409 PALLDQ8WX93 1383 aa20.25■□□□□ 0.83
CCDC107-204ENST00000378409 CCDC30Q5VVM6 783 aa20.25■□□□□ 0.83
CCDC107-204ENST00000378409 CHMP4AQ9BY43 222 aa20.24■□□□□ 0.83
CCDC107-204ENST00000378409 BCL11BQ9C0K0 894 aaPredicted RBP20.24■□□□□ 0.83
CCDC107-204ENST00000378409 CICQ96RK0 1608 aaPredicted RBP20.24■□□□□ 0.83
CCDC107-204ENST00000378409 ZNF831Q5JPB2 1677 aa20.23■□□□□ 0.83
CCDC107-204ENST00000378409 TRIM37O94972 964 aa20.23■□□□□ 0.83
CCDC107-204ENST00000378409 RRP1P56182 461 aaKnown RBP20.23■□□□□ 0.83
CCDC107-204ENST00000378409 STK31Q9BXU1 1019 aa20.23■□□□□ 0.83
CCDC107-204ENST00000378409 TNS1Q9HBL0 1735 aaKnown RBP20.23■□□□□ 0.83
CCDC107-204ENST00000378409 CANXP27824 592 aaKnown RBP20.22■□□□□ 0.83
CCDC107-204ENST00000378409 VSIG10Q8N0Z9 540 aa20.22■□□□□ 0.83
CCDC107-204ENST00000378409 MRPL50Q8N5N7 158 aaKnown RBP20.22■□□□□ 0.83
CCDC107-204ENST00000378409 RNF123Q5XPI4 1314 aa20.22■□□□□ 0.83
CCDC107-204ENST00000378409 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
CCDC107-204ENST00000378409 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.21■□□□□ 0.83
CCDC107-204ENST00000378409 FRAT1Q92837 279 aaPredicted RBP20.21■□□□□ 0.83
CCDC107-204ENST00000378409 USP16Q9Y5T5 823 aa20.21■□□□□ 0.83
CCDC107-204ENST00000378409 TAF1LQ8IZX4 1826 aa20.2■□□□□ 0.82
CCDC107-204ENST00000378409 PLIN1O60240 522 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms