RNA–Protein interactions for RNA: ENST00000377883.7

USP30-202, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-202ENST00000377883 AMIGO3Q86WK7 504 aa25.52■■□□□ 1.68
USP30-202ENST00000377883 DCAF5Q96JK2 942 aa25.52■■□□□ 1.68
USP30-202ENST00000377883 ITPK1Q13572 414 aa25.51■■□□□ 1.67
USP30-202ENST00000377883 SMIM5Q71RC9 77 aa25.5■■□□□ 1.67
USP30-202ENST00000377883 UBR3Q6ZT12 1888 aa25.49■■□□□ 1.67
USP30-202ENST00000377883 GNPATO15228 680 aa25.49■■□□□ 1.67
USP30-202ENST00000377883 YBX3P16989 372 aaKnown RBP eCLIP25.49■■□□□ 1.67
USP30-202ENST00000377883 ZNF530Q6P9A1 599 aaPredicted RBP25.49■■□□□ 1.67
USP30-202ENST00000377883 CABP4P57796 275 aa25.47■■□□□ 1.67
USP30-202ENST00000377883 C1orf141Q5JVX7 400 aa25.46■■□□□ 1.67
USP30-202ENST00000377883 RBM42Q9BTD8 480 aaKnown RBP25.46■■□□□ 1.67
USP30-202ENST00000377883 MTHFSP49914 203 aa25.45■■□□□ 1.66
USP30-202ENST00000377883 SULT6B1Q6IMI4 303 aa25.44■■□□□ 1.66
USP30-202ENST00000377883 AEBP1Q8IUX7 1158 aa25.44■■□□□ 1.66
USP30-202ENST00000377883 RTCBQ9Y3I0 505 aaKnown RBP25.44■■□□□ 1.66
USP30-202ENST00000377883 TRAPPC3LQ5T215 181 aa25.43■■□□□ 1.66
USP30-202ENST00000377883 RC3H1Q5TC82 1133 aaKnown RBP25.43■■□□□ 1.66
USP30-202ENST00000377883 IL13P35225 146 aa25.42■■□□□ 1.66
USP30-202ENST00000377883 AMER1Q5JTC6 1135 aaPredicted RBP25.42■■□□□ 1.66
USP30-202ENST00000377883 C1QTNF8P60827 252 aa25.41■■□□□ 1.66
USP30-202ENST00000377883 SLC4A9Q96Q91 983 aa25.41■■□□□ 1.66
USP30-202ENST00000377883 KDRP35968 1356 aa25.41■■□□□ 1.66
USP30-202ENST00000377883 KIF7Q2M1P5 1343 aa25.39■■□□□ 1.66
USP30-202ENST00000377883 KDM6AO15550 1401 aaPredicted RBP25.39■■□□□ 1.66
USP30-202ENST00000377883 ADRA2BP18089 450 aa25.39■■□□□ 1.66
USP30-202ENST00000377883 NLGN1Q8N2Q7 840 aa25.39■■□□□ 1.66
USP30-202ENST00000377883 NFATC2IPQ8NCF5 419 aa25.38■■□□□ 1.65
USP30-202ENST00000377883 CNTNAP4Q9C0A0 1308 aa25.37■■□□□ 1.65
USP30-202ENST00000377883 GIGYF1O75420 1035 aaPredicted RBP25.37■■□□□ 1.65
USP30-202ENST00000377883 RPS6KA4O75676 772 aa25.37■■□□□ 1.65
USP30-202ENST00000377883 MMP10P09238 476 aa25.37■■□□□ 1.65
USP30-202ENST00000377883 ARHGEF1Q92888 912 aaKnown RBP25.36■■□□□ 1.65
USP30-202ENST00000377883 ZNF831Q5JPB2 1677 aa25.36■■□□□ 1.65
USP30-202ENST00000377883 PTCD1O75127 700 aaKnown RBP25.35■■□□□ 1.65
USP30-202ENST00000377883 RFC4P35249 363 aa25.34■■□□□ 1.65
USP30-202ENST00000377883 AKAP4Q5JQC9 854 aa25.34■■□□□ 1.65
USP30-202ENST00000377883 PER1O15534 1290 aaPredicted RBP25.33■■□□□ 1.65
USP30-202ENST00000377883 GOLGB1Q14789 3259 aaKnown RBP25.31■■□□□ 1.64
USP30-202ENST00000377883 SENP3-EIF4A1A0A087X0R7 540 aa25.31■■□□□ 1.64
USP30-202ENST00000377883 TGFB2P61812 414 aa25.3■■□□□ 1.64
USP30-202ENST00000377883 WWC3Q9ULE0 1092 aa25.3■■□□□ 1.64
USP30-202ENST00000377883 GYS1P13807 737 aa25.29■■□□□ 1.64
USP30-202ENST00000377883 CRKLP46109 303 aaKnown RBP25.29■■□□□ 1.64
USP30-202ENST00000377883 MYH14Q7Z406 1995 aaKnown RBP25.28■■□□□ 1.64
USP30-202ENST00000377883 DIAPH1O60610 1272 aaKnown RBP25.28■■□□□ 1.64
USP30-202ENST00000377883 HMOX1P09601 288 aa25.28■■□□□ 1.64
USP30-202ENST00000377883 CC2D1BQ5T0F9 858 aaKnown RBP25.28■■□□□ 1.64
USP30-202ENST00000377883 CCDC87Q9NVE4 849 aa25.28■■□□□ 1.64
USP30-202ENST00000377883 PARP3Q9Y6F1 533 aa25.28■■□□□ 1.64
USP30-202ENST00000377883 COL5A3P25940 1745 aaPredicted RBP25.27■■□□□ 1.64
USP30-202ENST00000377883 SLC52A2Q9HAB3 445 aa25.27■■□□□ 1.64
USP30-202ENST00000377883 ATP10DQ9P241 1426 aa25.27■■□□□ 1.64
USP30-202ENST00000377883 LGR6Q9HBX8 967 aa25.26■■□□□ 1.63
USP30-202ENST00000377883 RNMTO43148 476 aaKnown RBP25.25■■□□□ 1.63
USP30-202ENST00000377883 SCN11AQ9UI33 1791 aa25.24■■□□□ 1.63
USP30-202ENST00000377883 GPBP1L1Q9HC44 474 aaPredicted RBP25.24■■□□□ 1.63
USP30-202ENST00000377883 A0A0G2JLW4 131 aa25.23■■□□□ 1.63
USP30-202ENST00000377883 MTHFSDQ2M296 383 aaKnown RBP25.22■■□□□ 1.63
USP30-202ENST00000377883 INTS5Q6P9B9 1019 aaKnown RBP25.22■■□□□ 1.63
USP30-202ENST00000377883 CICQ96RK0 1608 aaPredicted RBP25.22■■□□□ 1.63
USP30-202ENST00000377883 NPC1L1Q9UHC9 1359 aa25.21■■□□□ 1.63
USP30-202ENST00000377883 DNAJC10Q8IXB1 793 aa25.21■■□□□ 1.63
USP30-202ENST00000377883 KIF13BQ9NQT8 1826 aa25.21■■□□□ 1.63
USP30-202ENST00000377883 PXDNLA1KZ92 1463 aa25.21■■□□□ 1.63
USP30-202ENST00000377883 C10orf71Q711Q0 1435 aa25.2■■□□□ 1.63
USP30-202ENST00000377883 ADCY9O60503 1353 aa25.2■■□□□ 1.63
USP30-202ENST00000377883 SRP68Q9UHB9 627 aaKnown RBP25.2■■□□□ 1.62
USP30-202ENST00000377883 BCS1LQ9Y276 419 aa25.2■■□□□ 1.62
USP30-202ENST00000377883 USP42Q9H9J4 1324 aaKnown RBP25.19■■□□□ 1.62
USP30-202ENST00000377883 DPEP1P16444 411 aa25.19■■□□□ 1.62
USP30-202ENST00000377883 SLC39A6Q13433 755 aa25.19■■□□□ 1.62
USP30-202ENST00000377883 ZPR1O75312 459 aa25.18■■□□□ 1.62
USP30-202ENST00000377883 FKBP8Q14318 412 aa25.18■■□□□ 1.62
USP30-202ENST00000377883 C4AP0C0L4 1744 aa25.17■■□□□ 1.62
USP30-202ENST00000377883 ZEB1P37275 1124 aaPredicted RBP25.17■■□□□ 1.62
USP30-202ENST00000377883 CNGB1Q14028 1251 aaPredicted RBP25.17■■□□□ 1.62
USP30-202ENST00000377883 ZNF526Q8TF50 670 aaPredicted RBP25.17■■□□□ 1.62
USP30-202ENST00000377883 FCHSD2O94868 740 aa25.16■■□□□ 1.62
USP30-202ENST00000377883 CYP19A1P11511 503 aaPredicted RBP25.16■■□□□ 1.62
USP30-202ENST00000377883 TJP1Q07157 1748 aa25.15■■□□□ 1.62
USP30-202ENST00000377883 U2SURPO15042 1029 aaKnown RBP25.15■■□□□ 1.62
USP30-202ENST00000377883 ARHGAP27Q6ZUM4 889 aa25.15■■□□□ 1.62
USP30-202ENST00000377883 VSIG10Q8N0Z9 540 aa25.15■■□□□ 1.62
USP30-202ENST00000377883 N4BP2Q86UW6 1770 aaPredicted RBP25.15■■□□□ 1.62
USP30-202ENST00000377883 MRC1P22897 1456 aa25.15■■□□□ 1.62
USP30-202ENST00000377883 SOS1Q07889 1333 aaPredicted RBP25.13■■□□□ 1.61
USP30-202ENST00000377883 TM4SF1P30408 202 aa25.13■■□□□ 1.61
USP30-202ENST00000377883 DDR1Q08345 913 aa25.13■■□□□ 1.61
USP30-202ENST00000377883 PIM2Q9P1W9 311 aa25.13■■□□□ 1.61
USP30-202ENST00000377883 KIAA1551Q9HCM1 1747 aa25.12■■□□□ 1.61
USP30-202ENST00000377883 KCNA3P22001 575 aa25.12■■□□□ 1.61
USP30-202ENST00000377883 USPL1Q5W0Q7 1092 aa25.12■■□□□ 1.61
USP30-202ENST00000377883 GAS2L2Q8NHY3 880 aa25.12■■□□□ 1.61
USP30-202ENST00000377883 TTC5Q8N0Z6 440 aa25.11■■□□□ 1.61
USP30-202ENST00000377883 GNAT3A8MTJ3 354 aa25.1■■□□□ 1.61
USP30-202ENST00000377883 POLRMTO00411 1230 aaKnown RBP25.1■■□□□ 1.61
USP30-202ENST00000377883 NARFQ9UHQ1 456 aa25.1■■□□□ 1.61
USP30-202ENST00000377883 VIRMAQ69YN4 1812 aaKnown RBP25.09■■□□□ 1.61
USP30-202ENST00000377883 STARD3NLO95772 234 aa25.09■■□□□ 1.61
USP30-202ENST00000377883 TEFQ10587 303 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms