RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 KIF3CO14782 793 aa18.21■□□□□ 0.51
CLCN6-205ENST00000376492 PHKG2P15735 406 aa18.21■□□□□ 0.51
CLCN6-205ENST00000376492 ATP6V1AP38606 617 aa18.21■□□□□ 0.51
CLCN6-205ENST00000376492 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
CLCN6-205ENST00000376492 ATG3Q9NT62 314 aa18.21■□□□□ 0.51
CLCN6-205ENST00000376492 WASHC2AQ641Q2 1341 aa18.21■□□□□ 0.51
CLCN6-205ENST00000376492 KDRP35968 1356 aa18.19■□□□□ 0.5
CLCN6-205ENST00000376492 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.19■□□□□ 0.54e-9■■□□□ 12.8
CLCN6-205ENST00000376492 IFNL2Q8IZJ0 200 aa18.18■□□□□ 0.5
CLCN6-205ENST00000376492 SLC4A9Q96Q91 983 aa18.17■□□□□ 0.5
CLCN6-205ENST00000376492 POLKQ9UBT6 870 aa18.17■□□□□ 0.5
CLCN6-205ENST00000376492 KIAA1551Q9HCM1 1747 aa18.17■□□□□ 0.5
CLCN6-205ENST00000376492 C10orf71Q711Q0 1435 aa18.16■□□□□ 0.5
CLCN6-205ENST00000376492 EIF4A2Q14240 407 aaKnown RBP18.16■□□□□ 0.5
CLCN6-205ENST00000376492 A0A0G2JLW4 131 aa18.15■□□□□ 0.5
CLCN6-205ENST00000376492 BCS1LQ9Y276 419 aa18.15■□□□□ 0.5
CLCN6-205ENST00000376492 TNNT2P45379 298 aaPredicted RBP18.14■□□□□ 0.49
CLCN6-205ENST00000376492 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
CLCN6-205ENST00000376492 TRAPPC3LQ5T215 181 aa18.13■□□□□ 0.49
CLCN6-205ENST00000376492 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
CLCN6-205ENST00000376492 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
CLCN6-205ENST00000376492 KIF13BQ9NQT8 1826 aa18.12■□□□□ 0.49
CLCN6-205ENST00000376492 DPEP1P16444 411 aa18.12■□□□□ 0.49
CLCN6-205ENST00000376492 TGFB2P61812 414 aa18.12■□□□□ 0.49
CLCN6-205ENST00000376492 ARHGEF1Q92888 912 aaKnown RBP18.12■□□□□ 0.49
CLCN6-205ENST00000376492 GYS1P13807 737 aa18.11■□□□□ 0.49
CLCN6-205ENST00000376492 NLGN1Q8N2Q7 840 aa18.11■□□□□ 0.49
CLCN6-205ENST00000376492 KDM6AO15550 1401 aaPredicted RBP18.11■□□□□ 0.49
CLCN6-205ENST00000376492 ARHGAP27Q6ZUM4 889 aa18.1■□□□□ 0.49
CLCN6-205ENST00000376492 NMRK2Q9NPI5 230 aa18.1■□□□□ 0.49
CLCN6-205ENST00000376492 C4AP0C0L4 1744 aa18.09■□□□□ 0.49
CLCN6-205ENST00000376492 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
CLCN6-205ENST00000376492 ERVV-2B6SEH9 535 aa18.09■□□□□ 0.49
CLCN6-205ENST00000376492 FCHSD2O94868 740 aa18.09■□□□□ 0.49
CLCN6-205ENST00000376492 ADRA2BP18089 450 aa18.09■□□□□ 0.49
CLCN6-205ENST00000376492 POLR3GLQ9BT43 218 aa18.09■□□□□ 0.49
CLCN6-205ENST00000376492 CCDC87Q9NVE4 849 aa18.09■□□□□ 0.49
CLCN6-205ENST00000376492 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
CLCN6-205ENST00000376492 PLEKHG2Q9H7P9 1386 aa18.08■□□□□ 0.49
CLCN6-205ENST00000376492 TOMM70O94826 608 aa18.08■□□□□ 0.48
CLCN6-205ENST00000376492 RFC4P35249 363 aa18.08■□□□□ 0.48
CLCN6-205ENST00000376492 APLP1P51693 650 aa18.08■□□□□ 0.48
CLCN6-205ENST00000376492 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.48
CLCN6-205ENST00000376492 DCAF5Q96JK2 942 aa18.08■□□□□ 0.48
CLCN6-205ENST00000376492 ZNF831Q5JPB2 1677 aa18.07■□□□□ 0.48
CLCN6-205ENST00000376492 RPS6KA4O75676 772 aa18.07■□□□□ 0.48
CLCN6-205ENST00000376492 KCNA3P22001 575 aa18.07■□□□□ 0.48
CLCN6-205ENST00000376492 ZNF530Q6P9A1 599 aaPredicted RBP18.07■□□□□ 0.48
CLCN6-205ENST00000376492 PARP3Q9Y6F1 533 aa18.07■□□□□ 0.48
CLCN6-205ENST00000376492 CABP4P57796 275 aa18.06■□□□□ 0.48
CLCN6-205ENST00000376492 DNAJC5GQ8N7S2 189 aa18.06■□□□□ 0.48
CLCN6-205ENST00000376492 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
CLCN6-205ENST00000376492 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
CLCN6-205ENST00000376492 C9orf131Q5VYM1 1079 aa18.05■□□□□ 0.48
CLCN6-205ENST00000376492 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
CLCN6-205ENST00000376492 SRP68Q9UHB9 627 aaKnown RBP18.05■□□□□ 0.48
CLCN6-205ENST00000376492 PLEKHO1Q53GL0 409 aaPredicted RBP18.04■□□□□ 0.48
CLCN6-205ENST00000376492 BRCA1P38398 1863 aaKnown RBP18.03■□□□□ 0.48
CLCN6-205ENST00000376492 CRKLP46109 303 aaKnown RBP18.03■□□□□ 0.48
CLCN6-205ENST00000376492 DDR1Q08345 913 aa18.03■□□□□ 0.48
CLCN6-205ENST00000376492 FKBP8Q14318 412 aa18.03■□□□□ 0.48
CLCN6-205ENST00000376492 ZEB1P37275 1124 aaPredicted RBP18.02■□□□□ 0.48
CLCN6-205ENST00000376492 HTRA3P83110 453 aa18.02■□□□□ 0.48
CLCN6-205ENST00000376492 MYH14Q7Z406 1995 aaKnown RBP18.02■□□□□ 0.47
CLCN6-205ENST00000376492 USP42Q9H9J4 1324 aaKnown RBP18.01■□□□□ 0.47
CLCN6-205ENST00000376492 MTHFSP49914 203 aa18.01■□□□□ 0.47
CLCN6-205ENST00000376492 PIM2Q9P1W9 311 aa18.01■□□□□ 0.47
CLCN6-205ENST00000376492 KCPQ6ZWJ8 1503 aa18.01■□□□□ 0.47
CLCN6-205ENST00000376492 CHRNA5P30532 468 aa18■□□□□ 0.47
CLCN6-205ENST00000376492 AMOTQ4VCS5 1084 aa18■□□□□ 0.47
CLCN6-205ENST00000376492 DALRD3Q5D0E6 543 aaKnown RBP18■□□□□ 0.47
CLCN6-205ENST00000376492 NFATC2IPQ8NCF5 419 aa18■□□□□ 0.47
CLCN6-205ENST00000376492 RBM46Q8TBY0 533 aaKnown RBP18■□□□□ 0.47
CLCN6-205ENST00000376492 TJP1Q07157 1748 aa17.99■□□□□ 0.47
CLCN6-205ENST00000376492 C1orf141Q5JVX7 400 aa17.99■□□□□ 0.47
CLCN6-205ENST00000376492 PANK3Q9H999 370 aa17.99■□□□□ 0.47
CLCN6-205ENST00000376492 RNF181Q9P0P0 153 aa17.99■□□□□ 0.47
CLCN6-205ENST00000376492 WDR90Q96KV7 1748 aa17.98■□□□□ 0.47
CLCN6-205ENST00000376492 POLRMTO00411 1230 aaKnown RBP17.97■□□□□ 0.47
CLCN6-205ENST00000376492 INTS5Q6P9B9 1019 aaKnown RBP17.97■□□□□ 0.47
CLCN6-205ENST00000376492 C16orf71Q8IYS4 520 aaPredicted RBP17.97■□□□□ 0.47
CLCN6-205ENST00000376492 ARFGEF1Q9Y6D6 1849 aa17.97■□□□□ 0.47
CLCN6-205ENST00000376492 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
CLCN6-205ENST00000376492 SULT6B1Q6IMI4 303 aa17.96■□□□□ 0.47
CLCN6-205ENST00000376492 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
CLCN6-205ENST00000376492 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.46
CLCN6-205ENST00000376492 DNAJC10Q8IXB1 793 aa17.95■□□□□ 0.46
CLCN6-205ENST00000376492 TM4SF1P30408 202 aa17.94■□□□□ 0.46
CLCN6-205ENST00000376492 RASSF7Q02833 373 aa17.94■□□□□ 0.46
CLCN6-205ENST00000376492 FSTL1Q12841 308 aa17.94■□□□□ 0.46
CLCN6-205ENST00000376492 USPL1Q5W0Q7 1092 aa17.94■□□□□ 0.46
CLCN6-205ENST00000376492 KLRG1Q96E93 195 aa17.94■□□□□ 0.46
CLCN6-205ENST00000376492 RRAGCQ9HB90 399 aa17.94■□□□□ 0.46
CLCN6-205ENST00000376492 MORC1Q86VD1 984 aa17.93■□□□□ 0.46
CLCN6-205ENST00000376492 SOS1Q07889 1333 aaPredicted RBP17.93■□□□□ 0.46
CLCN6-205ENST00000376492 HSPA5P11021 654 aaKnown RBP17.92■□□□□ 0.46
CLCN6-205ENST00000376492 IL13P35225 146 aa17.92■□□□□ 0.46
CLCN6-205ENST00000376492 ZPR1O75312 459 aa17.91■□□□□ 0.46
CLCN6-205ENST00000376492 COL13A1Q5TAT6 717 aaPredicted RBP17.91■□□□□ 0.46
CLCN6-205ENST00000376492 JMYQ8N9B5 988 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms