RNA–Protein interactions for RNA: ENST00000375779.6

CLIC1-206, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIC1, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-206ENST00000375779 CHD4Q14839 1912 aa20■□□□□ 0.79
CLIC1-206ENST00000375779 ITPK1Q13572 414 aa19.99■□□□□ 0.79
CLIC1-206ENST00000375779 LINC00116Q8NCU8 138 aa19.99■□□□□ 0.79
CLIC1-206ENST00000375779 SLC4A9Q96Q91 983 aa19.99■□□□□ 0.79
CLIC1-206ENST00000375779 SSFA2P28290 1259 aa19.98■□□□□ 0.79
CLIC1-206ENST00000375779 AEBP1Q8IUX7 1158 aa19.98■□□□□ 0.79
CLIC1-206ENST00000375779 KDM6AO15550 1401 aaPredicted RBP19.96■□□□□ 0.79
CLIC1-206ENST00000375779 MTHFSP49914 203 aa19.96■□□□□ 0.79
CLIC1-206ENST00000375779 RC3H1Q5TC82 1133 aaKnown RBP19.96■□□□□ 0.79
CLIC1-206ENST00000375779 SULT6B1Q6IMI4 303 aa19.95■□□□□ 0.78
CLIC1-206ENST00000375779 CD2APQ9Y5K6 639 aa19.95■□□□□ 0.78
CLIC1-206ENST00000375779 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.94■□□□□ 0.78
CLIC1-206ENST00000375779 ATP6V1AP38606 617 aa19.94■□□□□ 0.78
CLIC1-206ENST00000375779 NLGN2Q8NFZ4 835 aa19.94■□□□□ 0.78
CLIC1-206ENST00000375779 AK7Q96M32 723 aa19.94■□□□□ 0.78
CLIC1-206ENST00000375779 ZNF530Q6P9A1 599 aaPredicted RBP19.93■□□□□ 0.78
CLIC1-206ENST00000375779 SMIM5Q71RC9 77 aa19.91■□□□□ 0.78
CLIC1-206ENST00000375779 ZNF784Q8NCA9 323 aaPredicted RBP19.91■□□□□ 0.78
CLIC1-206ENST00000375779 MYH14Q7Z406 1995 aaKnown RBP19.9■□□□□ 0.78
CLIC1-206ENST00000375779 CABP4P57796 275 aa19.9■□□□□ 0.78
CLIC1-206ENST00000375779 MSL1Q68DK7 614 aa19.9■□□□□ 0.78
CLIC1-206ENST00000375779 NFATC2IPQ8NCF5 419 aa19.9■□□□□ 0.78
CLIC1-206ENST00000375779 GPR162Q16538 588 aa19.89■□□□□ 0.77
CLIC1-206ENST00000375779 AKAP4Q5JQC9 854 aa19.89■□□□□ 0.77
CLIC1-206ENST00000375779 SCN11AQ9UI33 1791 aa19.89■□□□□ 0.77
CLIC1-206ENST00000375779 CNTNAP4Q9C0A0 1308 aa19.88■□□□□ 0.77
CLIC1-206ENST00000375779 RPS6KA4O75676 772 aa19.88■□□□□ 0.77
CLIC1-206ENST00000375779 COL5A3P25940 1745 aaPredicted RBP19.88■□□□□ 0.77
CLIC1-206ENST00000375779 GNPATO15228 680 aa19.87■□□□□ 0.77
CLIC1-206ENST00000375779 YBX3P16989 372 aaKnown RBP eCLIP19.87■□□□□ 0.774e-18■□□□□ 10.3
CLIC1-206ENST00000375779 C1orf141Q5JVX7 400 aa19.87■□□□□ 0.77
CLIC1-206ENST00000375779 CICQ96RK0 1608 aaPredicted RBP19.87■□□□□ 0.77
CLIC1-206ENST00000375779 DIAPH1O60610 1272 aaKnown RBP19.86■□□□□ 0.77
CLIC1-206ENST00000375779 LGR6Q9HBX8 967 aa19.86■□□□□ 0.77
CLIC1-206ENST00000375779 ADAMTS7Q9UKP4 1686 aa19.86■□□□□ 0.77
CLIC1-206ENST00000375779 GRIN3BO60391 1043 aa19.85■□□□□ 0.77
CLIC1-206ENST00000375779 CC2D1BQ5T0F9 858 aaKnown RBP19.85■□□□□ 0.77
CLIC1-206ENST00000375779 TRAPPC3LQ5T215 181 aa19.85■□□□□ 0.77
CLIC1-206ENST00000375779 ARHGEF1Q92888 912 aaKnown RBP19.85■□□□□ 0.77
CLIC1-206ENST00000375779 RTCBQ9Y3I0 505 aaKnown RBP19.85■□□□□ 0.77
CLIC1-206ENST00000375779 COL3A1P02461 1466 aaPredicted RBP19.85■□□□□ 0.77
CLIC1-206ENST00000375779 PHF14O94880 888 aa19.84■□□□□ 0.77
CLIC1-206ENST00000375779 RBM42Q9BTD8 480 aaKnown RBP19.84■□□□□ 0.77
CLIC1-206ENST00000375779 SLC52A2Q9HAB3 445 aa19.84■□□□□ 0.77
CLIC1-206ENST00000375779 RNMTO43148 476 aaKnown RBP19.83■□□□□ 0.77
CLIC1-206ENST00000375779 MTHFSDQ2M296 383 aaKnown RBP19.83■□□□□ 0.77
CLIC1-206ENST00000375779 NLGN1Q8N2Q7 840 aa19.83■□□□□ 0.77
CLIC1-206ENST00000375779 MRC1P22897 1456 aa19.82■□□□□ 0.76
CLIC1-206ENST00000375779 HMOX1P09601 288 aa19.81■□□□□ 0.76
CLIC1-206ENST00000375779 GYS1P13807 737 aa19.81■□□□□ 0.76
CLIC1-206ENST00000375779 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
CLIC1-206ENST00000375779 KIF13BQ9NQT8 1826 aa19.81■□□□□ 0.76
CLIC1-206ENST00000375779 PTCD1O75127 700 aaKnown RBP19.8■□□□□ 0.76
CLIC1-206ENST00000375779 INTS5Q6P9B9 1019 aaKnown RBP19.8■□□□□ 0.76
CLIC1-206ENST00000375779 CRKLP46109 303 aaKnown RBP19.79■□□□□ 0.76
CLIC1-206ENST00000375779 VIRMAQ69YN4 1812 aaKnown RBP19.79■□□□□ 0.76
CLIC1-206ENST00000375779 TJP1Q07157 1748 aa19.77■□□□□ 0.76
CLIC1-206ENST00000375779 MMP10P09238 476 aa19.77■□□□□ 0.76
CLIC1-206ENST00000375779 TGFB2P61812 414 aa19.77■□□□□ 0.76
CLIC1-206ENST00000375779 VSIG10Q8N0Z9 540 aa19.77■□□□□ 0.76
CLIC1-206ENST00000375779 IL17REQ8NFR9 667 aa19.76■□□□□ 0.75
CLIC1-206ENST00000375779 CYP19A1P11511 503 aaPredicted RBP19.75■□□□□ 0.75
CLIC1-206ENST00000375779 RFC4P35249 363 aa19.75■□□□□ 0.75
CLIC1-206ENST00000375779 KIAA1551Q9HCM1 1747 aa19.75■□□□□ 0.75
CLIC1-206ENST00000375779 TM4SF1P30408 202 aa19.74■□□□□ 0.75
CLIC1-206ENST00000375779 C4AP0C0L4 1744 aa19.73■□□□□ 0.75
CLIC1-206ENST00000375779 KCPQ6ZWJ8 1503 aa19.73■□□□□ 0.75
CLIC1-206ENST00000375779 SLC39A6Q13433 755 aa19.73■□□□□ 0.75
CLIC1-206ENST00000375779 PELP1Q8IZL8 1130 aaKnown RBP19.73■□□□□ 0.75
CLIC1-206ENST00000375779 USP42Q9H9J4 1324 aaKnown RBP19.73■□□□□ 0.75
CLIC1-206ENST00000375779 CEMIPQ8WUJ3 1361 aa19.72■□□□□ 0.75
CLIC1-206ENST00000375779 KCNA3P22001 575 aa19.72■□□□□ 0.75
CLIC1-206ENST00000375779 DNAJC10Q8IXB1 793 aa19.72■□□□□ 0.75
CLIC1-206ENST00000375779 C10orf71Q711Q0 1435 aa19.71■□□□□ 0.75
CLIC1-206ENST00000375779 UBR2Q8IWV8 1755 aa19.71■□□□□ 0.75
CLIC1-206ENST00000375779 GNAT3A8MTJ3 354 aa19.71■□□□□ 0.75
CLIC1-206ENST00000375779 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
CLIC1-206ENST00000375779 CCDC87Q9NVE4 849 aa19.71■□□□□ 0.75
CLIC1-206ENST00000375779 ADCY9O60503 1353 aa19.7■□□□□ 0.74
CLIC1-206ENST00000375779 PPP2R1AP30153 589 aa19.7■□□□□ 0.74
CLIC1-206ENST00000375779 GAS2L2Q8NHY3 880 aa19.7■□□□□ 0.74
CLIC1-206ENST00000375779 PHACTR3Q96KR7 559 aa19.7■□□□□ 0.74
CLIC1-206ENST00000375779 PXDNLA1KZ92 1463 aa19.7■□□□□ 0.74
CLIC1-206ENST00000375779 SOS1Q07889 1333 aaPredicted RBP19.7■□□□□ 0.74
CLIC1-206ENST00000375779 FKBP8Q14318 412 aa19.69■□□□□ 0.74
CLIC1-206ENST00000375779 SRP68Q9UHB9 627 aaKnown RBP19.69■□□□□ 0.74
CLIC1-206ENST00000375779 SIPA1L3O60292 1781 aaPredicted RBP19.68■□□□□ 0.74
CLIC1-206ENST00000375779 U2SURPO15042 1029 aaKnown RBP19.68■□□□□ 0.74
CLIC1-206ENST00000375779 FCHSD2O94868 740 aa19.68■□□□□ 0.74
CLIC1-206ENST00000375779 C1QTNF8P60827 252 aa19.68■□□□□ 0.74
CLIC1-206ENST00000375779 BRCA1P38398 1863 aaKnown RBP19.67■□□□□ 0.74
CLIC1-206ENST00000375779 ZNF790Q6PG37 636 aa19.67■□□□□ 0.74
CLIC1-206ENST00000375779 NARFQ9UHQ1 456 aa19.67■□□□□ 0.74
CLIC1-206ENST00000375779 PARP3Q9Y6F1 533 aa19.67■□□□□ 0.74
CLIC1-206ENST00000375779 EIF5P55010 431 aaKnown RBP19.66■□□□□ 0.74
CLIC1-206ENST00000375779 DDR1Q08345 913 aa19.66■□□□□ 0.74
CLIC1-206ENST00000375779 BCL2L12Q9HB09 334 aa19.66■□□□□ 0.74
CLIC1-206ENST00000375779 CEP350Q5VT06 3117 aa19.65■□□□□ 0.74
CLIC1-206ENST00000375779 A0A0G2JLW4 131 aa19.65■□□□□ 0.74
CLIC1-206ENST00000375779 POLRMTO00411 1230 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms