RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 SYNCQ9H7C4 482 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 NDC80O14777 642 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 TRAF1Q13077 416 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 FYCO1Q9BQS8 1478 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 KMT5BQ4FZB7 885 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
SCN2A-203ENST00000375437 TNMDQ9H2S6 317 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 FAM193AP78312 1265 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC12Q8WUD4 166 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-203ENST00000375437 NLRP6P59044 892 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 PROSER2Q86WR7 435 aaPredicted RBP6.31□□□□□ -1.4
SCN2A-203ENST00000375437 RAI14Q9P0K7 980 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 AKAP2Q9Y2D5 859 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 GMNNO75496 209 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC178Q5BJE1 867 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 FAM107BQ9H098 131 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 OPA1O60313 960 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 MAP7D1Q3KQU3 841 aa6.31□□□□□ -1.4
SCN2A-203ENST00000375437 IFI16Q16666 785 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 EFCAB5A4FU69 1503 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 FKBP4Q02790 459 aaKnown RBP eCLIP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 LUZP1Q86V48 1076 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CEP112Q8N8E3 955 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 KIAA1524Q8TCG1 905 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 ARHGAP5Q13017 1502 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCT4P50991 539 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 OTUD6BQ8N6M0 293 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 ANAPC4Q9UJX5 808 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 ST20-MTHFSA0A0A6YYL1 179 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 SURF6O75683 361 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 MTHFSP49914 203 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 FAM69CQ0P6D2 419 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 DDX46Q7L014 1031 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 PYM1Q9BRP8 204 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 BEGAINQ9BUH8 593 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 AMPD3Q01432 767 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC96Q2M329 555 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC174Q6PII3 467 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC83Q8IWF9 413 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 SYCP3Q8IZU3 236 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 HMGB3O15347 200 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 USO1O60763 962 aaKnown RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 KRT85P78386 507 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 ZNF444Q8N0Y2 327 aaPredicted RBP6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CNTLNQ9NXG0 1405 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 SPECC1LQ69YQ0 1117 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 TBC1D5Q92609 795 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 NCAPGQ9BPX3 1015 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 SMARCA4P51532 1647 aa6.3□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC6Q16204 474 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 GOLGA6L9A6NEM1 432 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 CASTP20810 708 aaKnown RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 ARHGAP29Q52LW3 1261 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 DDX54Q8TDD1 881 aaKnown RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 NOL3O60936 208 aaKnown RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 THEMISQ8N1K5 641 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 AIDAQ96BJ3 306 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 LRRC27Q9C0I9 530 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 PLEKHH2Q8IVE3 1493 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 MACROD2A1Z1Q3 448 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 TMCO3Q6UWJ1 677 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC89Q8N998 374 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 ZBED9Q6R2W3 1325 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 CECR2Q9BXF3 1484 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 C22orf23Q9BZE7 217 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 CEBPZQ03701 1054 aaKnown RBP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 UBA5Q9GZZ9 404 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 HLA-DOAP06340 250 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 FAM114A1Q8IWE2 563 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 BICD1Q96G01 975 aa6.29□□□□□ -1.4
SCN2A-203ENST00000375437 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCN2A-203ENST00000375437 RIOK3O14730 519 aaKnown RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 GABPB2Q8TAK5 448 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 STX6O43752 255 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 IQCA1Q86XH1 822 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 MSANTD4Q8NCY6 345 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CALML4Q96GE6 196 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 LPXNO60711 386 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 SATB1Q01826 763 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 U3KPZ7 1027 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 RAB3GAP2Q9H2M9 1393 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 KIF5CO60282 957 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 PAFAH1B1P43034 410 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CCDC102AQ96A19 550 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 IQCGQ9H095 443 aaKnown RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 SAMM50Q9Y512 469 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 WDR33Q9C0J8 1336 aaKnown RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 KIF2AO00139 706 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 HMOX1P09601 288 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 ST5P78524 1137 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CABP5Q9NP86 173 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 PUF60Q9UHX1 559 aaKnown RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 COG6Q9Y2V7 657 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 WDR63Q8IWG1 891 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CEP126Q9P2H0 1117 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 MAP4K4O95819 1239 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-203ENST00000375437 CASQ1P31415 396 aa6.28□□□□□ -1.4
SCN2A-203ENST00000375437 ATP6V1E1P36543 226 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms