RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 PHF14O94880 888 aa19.34■□□□□ 0.69
NELFE-201ENST00000375425 ITPK1Q13572 414 aa19.34■□□□□ 0.69
NELFE-201ENST00000375425 GPR162Q16538 588 aa19.34■□□□□ 0.69
NELFE-201ENST00000375425 C5P01031 1676 aa19.34■□□□□ 0.69
NELFE-201ENST00000375425 C1orf141Q5JVX7 400 aa19.34■□□□□ 0.69
NELFE-201ENST00000375425 NLGN2Q8NFZ4 835 aa19.33■□□□□ 0.68
NELFE-201ENST00000375425 SSFA2P28290 1259 aa19.32■□□□□ 0.68
NELFE-201ENST00000375425 CABP4P57796 275 aa19.32■□□□□ 0.68
NELFE-201ENST00000375425 COL24A1Q17RW2 1714 aa19.32■□□□□ 0.68
NELFE-201ENST00000375425 RBM42Q9BTD8 480 aaKnown RBP19.32■□□□□ 0.68
NELFE-201ENST00000375425 KDRP35968 1356 aa19.31■□□□□ 0.68
NELFE-201ENST00000375425 CNGB1Q14028 1251 aaPredicted RBP19.31■□□□□ 0.68
NELFE-201ENST00000375425 C4BP0C0L5 1744 aa19.3■□□□□ 0.68
NELFE-201ENST00000375425 TAF1LQ8IZX4 1826 aa19.3■□□□□ 0.68
NELFE-201ENST00000375425 GNPATO15228 680 aa19.3■□□□□ 0.68
NELFE-201ENST00000375425 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
NELFE-201ENST00000375425 SLC4A9Q96Q91 983 aa19.3■□□□□ 0.68
NELFE-201ENST00000375425 KDM6AO15550 1401 aaPredicted RBP19.29■□□□□ 0.68
NELFE-201ENST00000375425 NFATC2IPQ8NCF5 419 aa19.29■□□□□ 0.68
NELFE-201ENST00000375425 HMOX1P09601 288 aa19.28■□□□□ 0.68
NELFE-201ENST00000375425 DIAPH1O60610 1272 aaKnown RBP19.27■□□□□ 0.68
NELFE-201ENST00000375425 AKAP4Q5JQC9 854 aa19.26■□□□□ 0.67
NELFE-201ENST00000375425 CD2APQ9Y5K6 639 aa19.26■□□□□ 0.67
NELFE-201ENST00000375425 PTCD1O75127 700 aaKnown RBP19.25■□□□□ 0.67
NELFE-201ENST00000375425 RTCBQ9Y3I0 505 aaKnown RBP19.25■□□□□ 0.67
NELFE-201ENST00000375425 TRAPPC3LQ5T215 181 aa19.25■□□□□ 0.67
NELFE-201ENST00000375425 RC3H1Q5TC82 1133 aaKnown RBP19.25■□□□□ 0.67
NELFE-201ENST00000375425 ZNF784Q8NCA9 323 aaPredicted RBP19.25■□□□□ 0.67
NELFE-201ENST00000375425 NPC1L1Q9UHC9 1359 aa19.24■□□□□ 0.67
NELFE-201ENST00000375425 LGR6Q9HBX8 967 aa19.24■□□□□ 0.67
NELFE-201ENST00000375425 UBR3Q6ZT12 1888 aa19.23■□□□□ 0.67
NELFE-201ENST00000375425 YBX3P16989 372 aaKnown RBP eCLIP19.23■□□□□ 0.673e-7■■■□□ 19.1
NELFE-201ENST00000375425 MTHFSDQ2M296 383 aaKnown RBP19.22■□□□□ 0.67
NELFE-201ENST00000375425 GRIN3BO60391 1043 aa19.21■□□□□ 0.67
NELFE-201ENST00000375425 ARHGEF1Q92888 912 aaKnown RBP19.21■□□□□ 0.67
NELFE-201ENST00000375425 CNTNAP4Q9C0A0 1308 aa19.21■□□□□ 0.67
NELFE-201ENST00000375425 RNMTO43148 476 aaKnown RBP19.2■□□□□ 0.66
NELFE-201ENST00000375425 RPS6KA4O75676 772 aa19.2■□□□□ 0.66
NELFE-201ENST00000375425 SLC52A2Q9HAB3 445 aa19.2■□□□□ 0.66
NELFE-201ENST00000375425 U2SURPO15042 1029 aaKnown RBP19.19■□□□□ 0.66
NELFE-201ENST00000375425 ADRA2BP18089 450 aa19.19■□□□□ 0.66
NELFE-201ENST00000375425 MMP10P09238 476 aa19.18■□□□□ 0.66
NELFE-201ENST00000375425 RFC4P35249 363 aa19.18■□□□□ 0.66
NELFE-201ENST00000375425 NLGN1Q8N2Q7 840 aa19.18■□□□□ 0.66
NELFE-201ENST00000375425 CRKLP46109 303 aaKnown RBP19.17■□□□□ 0.66
NELFE-201ENST00000375425 SLC39A6Q13433 755 aa19.17■□□□□ 0.66
NELFE-201ENST00000375425 GYS1P13807 737 aa19.16■□□□□ 0.66
NELFE-201ENST00000375425 CHD4Q14839 1912 aa19.15■□□□□ 0.66
NELFE-201ENST00000375425 ZNF831Q5JPB2 1677 aa19.15■□□□□ 0.66
NELFE-201ENST00000375425 WWC3Q9ULE0 1092 aa19.15■□□□□ 0.66
NELFE-201ENST00000375425 INTS5Q6P9B9 1019 aaKnown RBP19.14■□□□□ 0.65
NELFE-201ENST00000375425 DNAJC10Q8IXB1 793 aa19.14■□□□□ 0.65
NELFE-201ENST00000375425 COL3A1P02461 1466 aaPredicted RBP19.13■□□□□ 0.65
NELFE-201ENST00000375425 CFAP53Q96M91 514 aa19.13■□□□□ 0.65
NELFE-201ENST00000375425 SCN11AQ9UI33 1791 aa19.11■□□□□ 0.65
NELFE-201ENST00000375425 IL17REQ8NFR9 667 aa19.11■□□□□ 0.65
NELFE-201ENST00000375425 GAS2L2Q8NHY3 880 aa19.11■□□□□ 0.65
NELFE-201ENST00000375425 SRP68Q9UHB9 627 aaKnown RBP19.11■□□□□ 0.65
NELFE-201ENST00000375425 COL5A3P25940 1745 aaPredicted RBP19.11■□□□□ 0.65
NELFE-201ENST00000375425 GNAT3A8MTJ3 354 aa19.1■□□□□ 0.65
NELFE-201ENST00000375425 PPP2R1AP30153 589 aa19.1■□□□□ 0.65
NELFE-201ENST00000375425 PARP3Q9Y6F1 533 aa19.1■□□□□ 0.65
NELFE-201ENST00000375425 MYH14Q7Z406 1995 aaKnown RBP19.1■□□□□ 0.65
NELFE-201ENST00000375425 CYP19A1P11511 503 aaPredicted RBP19.09■□□□□ 0.65
NELFE-201ENST00000375425 TGFB2P61812 414 aa19.09■□□□□ 0.65
NELFE-201ENST00000375425 PHACTR3Q96KR7 559 aa19.09■□□□□ 0.65
NELFE-201ENST00000375425 CCDC87Q9NVE4 849 aa19.09■□□□□ 0.65
NELFE-201ENST00000375425 USP42Q9H9J4 1324 aaKnown RBP19.09■□□□□ 0.65
NELFE-201ENST00000375425 TEFQ10587 303 aa19.08■□□□□ 0.65
NELFE-201ENST00000375425 FKBP8Q14318 412 aa19.08■□□□□ 0.65
NELFE-201ENST00000375425 VSIG10Q8N0Z9 540 aa19.08■□□□□ 0.65
NELFE-201ENST00000375425 NUDCQ9Y266 331 aa19.08■□□□□ 0.65
NELFE-201ENST00000375425 MRC1P22897 1456 aa19.08■□□□□ 0.64
NELFE-201ENST00000375425 A0A0G2JLW4 131 aa19.08■□□□□ 0.64
NELFE-201ENST00000375425 PRKAR2BP31323 418 aa19.08■□□□□ 0.64
NELFE-201ENST00000375425 ZPR1O75312 459 aa19.07■□□□□ 0.64
NELFE-201ENST00000375425 TTC5Q8N0Z6 440 aa19.07■□□□□ 0.64
NELFE-201ENST00000375425 RSPH6AQ9H0K4 717 aa19.07■□□□□ 0.64
NELFE-201ENST00000375425 U2AF1L5P0DN76 240 aaPredicted RBP19.06■□□□□ 0.64
NELFE-201ENST00000375425 U2AF1Q01081 240 aaKnown RBP eCLIP19.06■□□□□ 0.64
NELFE-201ENST00000375425 SOS1Q07889 1333 aaPredicted RBP19.05■□□□□ 0.64
NELFE-201ENST00000375425 CICQ96RK0 1608 aaPredicted RBP19.05■□□□□ 0.64
NELFE-201ENST00000375425 USPL1Q5W0Q7 1092 aa19.05■□□□□ 0.64
NELFE-201ENST00000375425 ZNF790Q6PG37 636 aa19.05■□□□□ 0.64
NELFE-201ENST00000375425 ZBTB1Q9Y2K1 713 aa19.05■□□□□ 0.64
NELFE-201ENST00000375425 TJP1Q07157 1748 aa19.05■□□□□ 0.64
NELFE-201ENST00000375425 DPEP1P16444 411 aa19.04■□□□□ 0.64
NELFE-201ENST00000375425 TM4SF1P30408 202 aa19.04■□□□□ 0.64
NELFE-201ENST00000375425 ZNF496Q96IT1 587 aaPredicted RBP19.04■□□□□ 0.64
NELFE-201ENST00000375425 KCPQ6ZWJ8 1503 aa19.04■□□□□ 0.64
NELFE-201ENST00000375425 ADAMTS7Q9UKP4 1686 aa19.04■□□□□ 0.64
NELFE-201ENST00000375425 PXDNLA1KZ92 1463 aa19.03■□□□□ 0.64
NELFE-201ENST00000375425 STARD3NLO95772 234 aa19.03■□□□□ 0.64
NELFE-201ENST00000375425 C1QTNF8P60827 252 aa19.03■□□□□ 0.64
NELFE-201ENST00000375425 DDR1Q08345 913 aa19.03■□□□□ 0.64
NELFE-201ENST00000375425 C10orf71Q711Q0 1435 aa19.03■□□□□ 0.64
NELFE-201ENST00000375425 GIGYF1O75420 1035 aaPredicted RBP19.02■□□□□ 0.64
NELFE-201ENST00000375425 FCHSD2O94868 740 aa19.02■□□□□ 0.64
NELFE-201ENST00000375425 CANXP27824 592 aaKnown RBP19.02■□□□□ 0.64
NELFE-201ENST00000375425 NARFQ9UHQ1 456 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms