RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 MYD88Q99836 296 aa13.13□□□□□ -0.31
COL5A2-201ENST00000374866 CCDC91Q7Z6B0 441 aa13.13□□□□□ -0.31
COL5A2-201ENST00000374866 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.13□□□□□ -0.31
COL5A2-201ENST00000374866 SAMM50Q9Y512 469 aa13.12□□□□□ -0.31
COL5A2-201ENST00000374866 CTNNA2P26232 953 aa13.12□□□□□ -0.31
COL5A2-201ENST00000374866 PRPF4BQ13523 1007 aaKnown RBP13.12□□□□□ -0.31
COL5A2-201ENST00000374866 TNIP1Q15025 636 aa13.12□□□□□ -0.31
COL5A2-201ENST00000374866 UPF3BQ9BZI7 483 aaKnown RBP13.12□□□□□ -0.31
COL5A2-201ENST00000374866 BLOC1S2Q6QNY1 142 aa13.12□□□□□ -0.31
COL5A2-201ENST00000374866 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
COL5A2-201ENST00000374866 BOLA2Q9H3K6 86 aa13.12□□□□□ -0.31
COL5A2-201ENST00000374866 GPTP24298 496 aa13.12□□□□□ -0.31
COL5A2-201ENST00000374866 CACNA2D4Q7Z3S7 1137 aa13.12□□□□□ -0.31
COL5A2-201ENST00000374866 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
COL5A2-201ENST00000374866 LARP1Q6PKG0 1096 aaKnown RBP13.11□□□□□ -0.31
COL5A2-201ENST00000374866 PDCP20941 246 aa13.11□□□□□ -0.31
COL5A2-201ENST00000374866 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
COL5A2-201ENST00000374866 KIF7Q2M1P5 1343 aa13.11□□□□□ -0.31
COL5A2-201ENST00000374866 RUSC2Q8N2Y8 1516 aa13.11□□□□□ -0.31
COL5A2-201ENST00000374866 ZSCAN25Q6NSZ9 544 aa13.11□□□□□ -0.31
COL5A2-201ENST00000374866 APBB1IPQ7Z5R6 666 aaPredicted RBP13.11□□□□□ -0.31
COL5A2-201ENST00000374866 PANK2Q9BZ23 570 aa13.11□□□□□ -0.31
COL5A2-201ENST00000374866 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
COL5A2-201ENST00000374866 CASQ1P31415 396 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 CCT2P78371 535 aaKnown RBP13.1□□□□□ -0.31
COL5A2-201ENST00000374866 KRT85P78386 507 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.31
COL5A2-201ENST00000374866 SLC12A5Q9H2X9 1139 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 RNF187Q5TA31 235 aaPredicted RBP13.1□□□□□ -0.31
COL5A2-201ENST00000374866 GIMAP7Q8NHV1 300 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 CCDC66A2RUB6 948 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 KIF20AO95235 890 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 IFFO1Q0D2I5 559 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 RABEP1Q15276 862 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 THUMPD2Q9BTF0 503 aaKnown RBP13.1□□□□□ -0.31
COL5A2-201ENST00000374866 EXOC6BQ9Y2D4 811 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 F8W031 263 aaPredicted RBP13.1□□□□□ -0.31
COL5A2-201ENST00000374866 RPGRQ92834 1020 aaKnown RBP13.1□□□□□ -0.31
COL5A2-201ENST00000374866 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
COL5A2-201ENST00000374866 TRMT1Q9NXH9 659 aaKnown RBP13.1□□□□□ -0.31
COL5A2-201ENST00000374866 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 POLR3GO15318 223 aaPredicted RBP13.09□□□□□ -0.31
COL5A2-201ENST00000374866 CBFA2T2O43439 604 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 LMAN1P49257 510 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 INCENPQ9NQS7 918 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
COL5A2-201ENST00000374866 GRIPAP1Q4V328 841 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 MCM10Q7L590 875 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 SYCE3A1L190 88 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 HOMER2Q9NSB8 354 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 CCDC148Q8NFR7 591 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 NUP62CLQ9H1M0 184 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 CCDC150Q8NCX0 1101 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
COL5A2-201ENST00000374866 TDRD12Q587J7 1177 aaKnown RBP13.08□□□□□ -0.32
COL5A2-201ENST00000374866 AEBP1Q8IUX7 1158 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 ANKRD1Q15327 319 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 CAVIN4Q5BKX8 364 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 C6orf229H3BNL8 230 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 ATP2C2O75185 946 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 SPA17Q15506 151 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 FEZ1Q99689 392 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 CCDC8Q9H0W5 538 aaPredicted RBP13.08□□□□□ -0.32
COL5A2-201ENST00000374866 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
COL5A2-201ENST00000374866 AKNAD1Q5T1N1 836 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 TMCO3Q6UWJ1 677 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 ZNF444Q8N0Y2 327 aaPredicted RBP13.08□□□□□ -0.32
COL5A2-201ENST00000374866 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.32
COL5A2-201ENST00000374866 TCERG1LQ5VWI1 586 aa13.08□□□□□ -0.32
COL5A2-201ENST00000374866 PRPF40BQ6NWY9 871 aaKnown RBP13.08□□□□□ -0.32
COL5A2-201ENST00000374866 CBX1P83916 185 aa13.07□□□□□ -0.32
COL5A2-201ENST00000374866 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
COL5A2-201ENST00000374866 BIN1O00499 593 aa13.07□□□□□ -0.32
COL5A2-201ENST00000374866 PPP2R1AP30153 589 aa13.07□□□□□ -0.32
COL5A2-201ENST00000374866 CUL5Q93034 780 aa13.07□□□□□ -0.32
COL5A2-201ENST00000374866 BICD1Q96G01 975 aa13.07□□□□□ -0.32
COL5A2-201ENST00000374866 TSG101Q99816 390 aa13.07□□□□□ -0.32
COL5A2-201ENST00000374866 EIF3JO75822 258 aaKnown RBP13.07□□□□□ -0.32
COL5A2-201ENST00000374866 DDX23Q9BUQ8 820 aaKnown RBP13.07□□□□□ -0.32
COL5A2-201ENST00000374866 ERLIN1O75477 346 aa13.07□□□□□ -0.32
COL5A2-201ENST00000374866 CDKL5O76039 1030 aa13.07□□□□□ -0.32
COL5A2-201ENST00000374866 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
COL5A2-201ENST00000374866 PPP1R12BO60237 982 aaPredicted RBP13.06□□□□□ -0.32
COL5A2-201ENST00000374866 STAMBPO95630 424 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 OTUD6BQ8N6M0 293 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 GJC1P36383 396 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 LUZP1Q86V48 1076 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 TMOD3Q9NYL9 352 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 PRC1O43663 620 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 MBD3O95983 291 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 PAIP2Q9BPZ3 127 aaKnown RBP13.06□□□□□ -0.32
COL5A2-201ENST00000374866 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 NLRP5P59047 1200 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 SYCP3Q8IZU3 236 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
COL5A2-201ENST00000374866 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
COL5A2-201ENST00000374866 HSP90AA4PQ58FG1 418 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms