RNA–Protein interactions for RNA: ENST00000374555.7

MDS2-201, Transcript of myelodysplastic syndrome 2 translocation associated, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene MDS2, Length 1,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDS2-201ENST00000374555 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
MDS2-201ENST00000374555 SYT17Q9BSW7 474 aa18.42■□□□□ 0.54
MDS2-201ENST00000374555 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
MDS2-201ENST00000374555 C4BP0C0L5 1744 aa18.41■□□□□ 0.54
MDS2-201ENST00000374555 PHF14O94880 888 aa18.41■□□□□ 0.54
MDS2-201ENST00000374555 AKAP4Q5JQC9 854 aa18.41■□□□□ 0.54
MDS2-201ENST00000374555 TAF1LQ8IZX4 1826 aa18.41■□□□□ 0.54
MDS2-201ENST00000374555 MSL1Q68DK7 614 aa18.4■□□□□ 0.54
MDS2-201ENST00000374555 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
MDS2-201ENST00000374555 ITPK1Q13572 414 aa18.39■□□□□ 0.53
MDS2-201ENST00000374555 NFATC2IPQ8NCF5 419 aa18.39■□□□□ 0.53
MDS2-201ENST00000374555 COL3A1P02461 1466 aaPredicted RBP18.38■□□□□ 0.53
MDS2-201ENST00000374555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
MDS2-201ENST00000374555 GNPATO15228 680 aa18.37■□□□□ 0.53
MDS2-201ENST00000374555 PTCD1O75127 700 aaKnown RBP18.37■□□□□ 0.53
MDS2-201ENST00000374555 MTHFSDQ2M296 383 aaKnown RBP18.37■□□□□ 0.53
MDS2-201ENST00000374555 SSFA2P28290 1259 aa18.36■□□□□ 0.53
MDS2-201ENST00000374555 PPP2R1AP30153 589 aa18.36■□□□□ 0.53
MDS2-201ENST00000374555 SMIM5Q71RC9 77 aa18.36■□□□□ 0.53
MDS2-201ENST00000374555 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
MDS2-201ENST00000374555 LGR6Q9HBX8 967 aa18.35■□□□□ 0.53
MDS2-201ENST00000374555 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
MDS2-201ENST00000374555 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
MDS2-201ENST00000374555 SLC52A2Q9HAB3 445 aa18.34■□□□□ 0.53
MDS2-201ENST00000374555 MAP3K5Q99683 1374 aa18.33■□□□□ 0.53
MDS2-201ENST00000374555 SCN11AQ9UI33 1791 aa18.33■□□□□ 0.53
MDS2-201ENST00000374555 SLC4A9Q96Q91 983 aa18.33■□□□□ 0.52
MDS2-201ENST00000374555 RTCBQ9Y3I0 505 aaKnown RBP18.33■□□□□ 0.52
MDS2-201ENST00000374555 GAS2L2Q8NHY3 880 aa18.32■□□□□ 0.52
MDS2-201ENST00000374555 UBR3Q6ZT12 1888 aa18.32■□□□□ 0.52
MDS2-201ENST00000374555 COL24A1Q17RW2 1714 aa18.32■□□□□ 0.52
MDS2-201ENST00000374555 U2AF1L5P0DN76 240 aaPredicted RBP18.31■□□□□ 0.52
MDS2-201ENST00000374555 YY1P25490 414 aa18.31■□□□□ 0.52
MDS2-201ENST00000374555 U2AF1Q01081 240 aaKnown RBP eCLIP18.31■□□□□ 0.52
MDS2-201ENST00000374555 PRKAR2BP31323 418 aa18.3■□□□□ 0.52
MDS2-201ENST00000374555 TRAPPC3LQ5T215 181 aa18.3■□□□□ 0.52
MDS2-201ENST00000374555 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
MDS2-201ENST00000374555 CNTNAP4Q9C0A0 1308 aa18.29■□□□□ 0.52
MDS2-201ENST00000374555 ZNF831Q5JPB2 1677 aa18.29■□□□□ 0.52
MDS2-201ENST00000374555 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
MDS2-201ENST00000374555 GPR162Q16538 588 aa18.29■□□□□ 0.52
MDS2-201ENST00000374555 RC3H1Q5TC82 1133 aaKnown RBP18.29■□□□□ 0.52
MDS2-201ENST00000374555 TEFQ10587 303 aa18.28■□□□□ 0.52
MDS2-201ENST00000374555 SLC39A6Q13433 755 aa18.28■□□□□ 0.52
MDS2-201ENST00000374555 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
MDS2-201ENST00000374555 RSPH6AQ9H0K4 717 aa18.28■□□□□ 0.52
MDS2-201ENST00000374555 MRC1P22897 1456 aa18.27■□□□□ 0.52
MDS2-201ENST00000374555 RPS6KA4O75676 772 aa18.27■□□□□ 0.52
MDS2-201ENST00000374555 COL5A3P25940 1745 aaPredicted RBP18.26■□□□□ 0.51
MDS2-201ENST00000374555 ADRA2BP18089 450 aa18.26■□□□□ 0.51
MDS2-201ENST00000374555 RFC4P35249 363 aa18.26■□□□□ 0.51
MDS2-201ENST00000374555 CRKLP46109 303 aaKnown RBP18.26■□□□□ 0.51
MDS2-201ENST00000374555 TTC5Q8N0Z6 440 aa18.26■□□□□ 0.51
MDS2-201ENST00000374555 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
MDS2-201ENST00000374555 ARHGEF1Q92888 912 aaKnown RBP18.25■□□□□ 0.51
MDS2-201ENST00000374555 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
MDS2-201ENST00000374555 VIRMAQ69YN4 1812 aaKnown RBP18.24■□□□□ 0.51
MDS2-201ENST00000374555 FCHSD2O94868 740 aa18.24■□□□□ 0.51
MDS2-201ENST00000374555 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
MDS2-201ENST00000374555 CD2APQ9Y5K6 639 aa18.24■□□□□ 0.51
MDS2-201ENST00000374555 ADAMTS7Q9UKP4 1686 aa18.23■□□□□ 0.51
MDS2-201ENST00000374555 NEFMP07197 916 aa18.23■□□□□ 0.51
MDS2-201ENST00000374555 NLGN1Q8N2Q7 840 aa18.23■□□□□ 0.51
MDS2-201ENST00000374555 IL17REQ8NFR9 667 aa18.23■□□□□ 0.51
MDS2-201ENST00000374555 TJP1Q07157 1748 aa18.23■□□□□ 0.51
MDS2-201ENST00000374555 MMP10P09238 476 aa18.22■□□□□ 0.51
MDS2-201ENST00000374555 RTF1Q92541 710 aaKnown RBP18.22■□□□□ 0.51
MDS2-201ENST00000374555 CCDC87Q9NVE4 849 aa18.22■□□□□ 0.51
MDS2-201ENST00000374555 KCPQ6ZWJ8 1503 aa18.2■□□□□ 0.5
MDS2-201ENST00000374555 INTS5Q6P9B9 1019 aaKnown RBP18.2■□□□□ 0.5
MDS2-201ENST00000374555 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
MDS2-201ENST00000374555 CYP19A1P11511 503 aaPredicted RBP18.19■□□□□ 0.5
MDS2-201ENST00000374555 GYS1P13807 737 aa18.19■□□□□ 0.5
MDS2-201ENST00000374555 RALBP1Q15311 655 aa18.19■□□□□ 0.5
MDS2-201ENST00000374555 ZNF790Q6PG37 636 aa18.19■□□□□ 0.5
MDS2-201ENST00000374555 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
MDS2-201ENST00000374555 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
MDS2-201ENST00000374555 BTBD11A6QL63 1104 aa18.18■□□□□ 0.5
MDS2-201ENST00000374555 SRP68Q9UHB9 627 aaKnown RBP18.18■□□□□ 0.5
MDS2-201ENST00000374555 PARP3Q9Y6F1 533 aa18.18■□□□□ 0.5
MDS2-201ENST00000374555 ZPR1O75312 459 aa18.17■□□□□ 0.5
MDS2-201ENST00000374555 STARD3NLO95772 234 aa18.17■□□□□ 0.5
MDS2-201ENST00000374555 MCM10Q7L590 875 aa18.17■□□□□ 0.5
MDS2-201ENST00000374555 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
MDS2-201ENST00000374555 USP42Q9H9J4 1324 aaKnown RBP18.17■□□□□ 0.5
MDS2-201ENST00000374555 CEMIPQ8WUJ3 1361 aa18.17■□□□□ 0.5
MDS2-201ENST00000374555 C4AP0C0L4 1744 aa18.16■□□□□ 0.5
MDS2-201ENST00000374555 GRIN3BO60391 1043 aa18.16■□□□□ 0.5
MDS2-201ENST00000374555 WWC3Q9ULE0 1092 aa18.16■□□□□ 0.5
MDS2-201ENST00000374555 ZBTB1Q9Y2K1 713 aa18.16■□□□□ 0.5
MDS2-201ENST00000374555 SOS1Q07889 1333 aaPredicted RBP18.16■□□□□ 0.5
MDS2-201ENST00000374555 YBX3P16989 372 aaKnown RBP eCLIP18.15■□□□□ 0.5
MDS2-201ENST00000374555 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
MDS2-201ENST00000374555 DCTN1Q14203 1278 aa18.15■□□□□ 0.5
MDS2-201ENST00000374555 FMNL2Q96PY5 1086 aa18.15■□□□□ 0.5
MDS2-201ENST00000374555 TEX13AQ9BXU3 409 aaPredicted RBP18.15■□□□□ 0.5
MDS2-201ENST00000374555 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
MDS2-201ENST00000374555 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
MDS2-201ENST00000374555 UBR2Q8IWV8 1755 aa18.14■□□□□ 0.5
MDS2-201ENST00000374555 MAPK8IP3Q9UPT6 1336 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms