RNA–Protein interactions for RNA: ENST00000374446.6

ZNF239-202, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-202ENST00000374446 NFATC2IPQ8NCF5 419 aa15.47■□□□□ 0.07
ZNF239-202ENST00000374446 EXOC6Q8TAG9 804 aa15.47■□□□□ 0.07
ZNF239-202ENST00000374446 LRP6O75581 1613 aa15.47■□□□□ 0.07
ZNF239-202ENST00000374446 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.07
ZNF239-202ENST00000374446 PPP4R2Q9NY27 417 aa15.46■□□□□ 0.07
ZNF239-202ENST00000374446 TCERG1O14776 1098 aaKnown RBP15.46■□□□□ 0.07
ZNF239-202ENST00000374446 KCNQ3O43525 872 aa15.46■□□□□ 0.07
ZNF239-202ENST00000374446 CABP4P57796 275 aa15.46■□□□□ 0.07
ZNF239-202ENST00000374446 EIF4A1P60842 406 aaKnown RBP15.46■□□□□ 0.07
ZNF239-202ENST00000374446 VPS72Q15906 364 aa15.46■□□□□ 0.07
ZNF239-202ENST00000374446 ZKSCAN2Q63HK3 967 aa15.46■□□□□ 0.07
ZNF239-202ENST00000374446 CRBNQ96SW2 442 aa15.46■□□□□ 0.07
ZNF239-202ENST00000374446 NOB1Q9ULX3 412 aaKnown RBP15.46■□□□□ 0.07
ZNF239-202ENST00000374446 BCL9LQ86UU0 1499 aa15.46■□□□□ 0.06
ZNF239-202ENST00000374446 IPO8O15397 1037 aaKnown RBP15.45■□□□□ 0.06
ZNF239-202ENST00000374446 USP21Q9UK80 565 aa15.45■□□□□ 0.06
ZNF239-202ENST00000374446 NRAPQ86VF7 1730 aa15.45■□□□□ 0.06
ZNF239-202ENST00000374446 NWD2Q9ULI1 1742 aa15.45■□□□□ 0.06
ZNF239-202ENST00000374446 SOS1Q07889 1333 aaPredicted RBP15.45■□□□□ 0.06
ZNF239-202ENST00000374446 KIF16BQ96L93 1317 aa15.45■□□□□ 0.06
ZNF239-202ENST00000374446 ADAMTS7Q9UKP4 1686 aa15.45■□□□□ 0.06
ZNF239-202ENST00000374446 ERVV-2B6SEH9 535 aa15.44■□□□□ 0.06
ZNF239-202ENST00000374446 BARGINQ6ZT62 677 aa15.44■□□□□ 0.06
ZNF239-202ENST00000374446 PANK1Q8TE04 598 aa15.43■□□□□ 0.06
ZNF239-202ENST00000374446 MS4A1P11836 297 aa15.43■□□□□ 0.06
ZNF239-202ENST00000374446 ATF7IPQ6VMQ6 1270 aa15.43■□□□□ 0.06
ZNF239-202ENST00000374446 SLC39A6Q13433 755 aa15.42■□□□□ 0.06
ZNF239-202ENST00000374446 ZNF790Q6PG37 636 aa15.42■□□□□ 0.06
ZNF239-202ENST00000374446 TNNQ9UQP3 1299 aa15.42■□□□□ 0.06
ZNF239-202ENST00000374446 HOXB7P09629 217 aa15.41■□□□□ 0.06
ZNF239-202ENST00000374446 TRIM27P14373 513 aa15.41■□□□□ 0.06
ZNF239-202ENST00000374446 DDB1Q16531 1140 aa15.41■□□□□ 0.06
ZNF239-202ENST00000374446 CCDC30Q5VVM6 783 aa15.41■□□□□ 0.06
ZNF239-202ENST00000374446 DZIP1LQ8IYY4 767 aaKnown RBP15.41■□□□□ 0.06
ZNF239-202ENST00000374446 ARHGAP45Q92619 1136 aa15.41■□□□□ 0.06
ZNF239-202ENST00000374446 CLUAP1Q96AJ1 413 aa15.41■□□□□ 0.06
ZNF239-202ENST00000374446 SCN11AQ9UI33 1791 aa15.41■□□□□ 0.06
ZNF239-202ENST00000374446 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
ZNF239-202ENST00000374446 CHMP4AQ9BY43 222 aa15.41■□□□□ 0.06
ZNF239-202ENST00000374446 MRC1P22897 1456 aa15.4■□□□□ 0.06
ZNF239-202ENST00000374446 RLBP1P12271 317 aa15.4■□□□□ 0.06
ZNF239-202ENST00000374446 FTSJ3Q8IY81 847 aaKnown RBP15.4■□□□□ 0.06
ZNF239-202ENST00000374446 COG6Q9Y2V7 657 aa15.4■□□□□ 0.06
ZNF239-202ENST00000374446 AFF2P51816 1311 aa15.4■□□□□ 0.06
ZNF239-202ENST00000374446 FAM98CQ17RN3 349 aaKnown RBP15.39■□□□□ 0.05
ZNF239-202ENST00000374446 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
ZNF239-202ENST00000374446 STK31Q9BXU1 1019 aa15.39■□□□□ 0.05
ZNF239-202ENST00000374446 HEG1Q9ULI3 1381 aa15.39■□□□□ 0.05
ZNF239-202ENST00000374446 GIGYF1O75420 1035 aaPredicted RBP15.39■□□□□ 0.05
ZNF239-202ENST00000374446 HDGFL1Q5TGJ6 251 aa15.39■□□□□ 0.05
ZNF239-202ENST00000374446 NECTIN2Q92692 538 aa15.39■□□□□ 0.05
ZNF239-202ENST00000374446 TNS2Q63HR2 1409 aa15.39■□□□□ 0.05
ZNF239-202ENST00000374446 EIF2S2P20042 333 aaKnown RBP15.38■□□□□ 0.05
ZNF239-202ENST00000374446 KDM3BQ7LBC6 1761 aa15.38■□□□□ 0.05
ZNF239-202ENST00000374446 SHANK3Q9BYB0 1731 aa15.38■□□□□ 0.05
ZNF239-202ENST00000374446 SIPA1L3O60292 1781 aaPredicted RBP15.38■□□□□ 0.05
ZNF239-202ENST00000374446 B4GALNT3Q6L9W6 998 aa15.38■□□□□ 0.05
ZNF239-202ENST00000374446 API5Q9BZZ5 524 aaKnown RBP15.38■□□□□ 0.05
ZNF239-202ENST00000374446 TMOD3Q9NYL9 352 aa15.38■□□□□ 0.05
ZNF239-202ENST00000374446 VIRMAQ69YN4 1812 aaKnown RBP15.37■□□□□ 0.05
ZNF239-202ENST00000374446 ZNF496Q96IT1 587 aaPredicted RBP15.37■□□□□ 0.05
ZNF239-202ENST00000374446 CCDC136Q96JN2 1154 aa15.37■□□□□ 0.05
ZNF239-202ENST00000374446 FMNL2Q96PY5 1086 aa15.36■□□□□ 0.05
ZNF239-202ENST00000374446 MVPQ14764 893 aaKnown RBP15.36■□□□□ 0.05
ZNF239-202ENST00000374446 MARCH10Q8NA82 808 aaPredicted RBP15.36■□□□□ 0.05
ZNF239-202ENST00000374446 GJD4Q96KN9 370 aaPredicted RBP15.36■□□□□ 0.05
ZNF239-202ENST00000374446 PTPRCP08575 1304 aa15.35■□□□□ 0.05
ZNF239-202ENST00000374446 PRAMEF22A3QJZ6 481 aa15.35■□□□□ 0.05
ZNF239-202ENST00000374446 G2E3Q7L622 706 aa15.35■□□□□ 0.05
ZNF239-202ENST00000374446 TMEM57Q8N5G2 664 aa15.35■□□□□ 0.05
ZNF239-202ENST00000374446 TRPC5Q9UL62 973 aaPredicted RBP15.35■□□□□ 0.05
ZNF239-202ENST00000374446 SNRPA1P09661 255 aaKnown RBP15.34■□□□□ 0.05
ZNF239-202ENST00000374446 PIGBQ92521 554 aa15.34■□□□□ 0.05
ZNF239-202ENST00000374446 A0A0G2JS52 829 aa15.34■□□□□ 0.05
ZNF239-202ENST00000374446 MYT1Q01538 1121 aa15.34■□□□□ 0.05
ZNF239-202ENST00000374446 ITPRIPQ8IWB1 547 aa15.34■□□□□ 0.05
ZNF239-202ENST00000374446 WNK3Q9BYP7 1800 aa15.33■□□□□ 0.05
ZNF239-202ENST00000374446 CHPF2Q9P2E5 772 aa15.33■□□□□ 0.04
ZNF239-202ENST00000374446 PRIM1P49642 420 aaKnown RBP15.33■□□□□ 0.04
ZNF239-202ENST00000374446 FLIIQ13045 1269 aa15.33■□□□□ 0.04
ZNF239-202ENST00000374446 AAMPQ13685 434 aa15.33■□□□□ 0.04
ZNF239-202ENST00000374446 QTRT2Q9H974 415 aaKnown RBP15.33■□□□□ 0.04
ZNF239-202ENST00000374446 DBF4Q9UBU7 674 aaPredicted RBP15.33■□□□□ 0.04
ZNF239-202ENST00000374446 DDX19BQ9UMR2 479 aa15.33■□□□□ 0.04
ZNF239-202ENST00000374446 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.32■□□□□ 0.04
ZNF239-202ENST00000374446 ABCC4O15439 1325 aa15.32■□□□□ 0.04
ZNF239-202ENST00000374446 SYTL4Q96C24 671 aaPredicted RBP15.32■□□□□ 0.04
ZNF239-202ENST00000374446 ATRNO75882 1429 aa15.32■□□□□ 0.04
ZNF239-202ENST00000374446 PTCD1O75127 700 aaKnown RBP15.31■□□□□ 0.04
ZNF239-202ENST00000374446 PHAXQ9H814 394 aaKnown RBP15.31■□□□□ 0.04
ZNF239-202ENST00000374446 ATG3Q9NT62 314 aa15.31■□□□□ 0.04
ZNF239-202ENST00000374446 ASAP1Q9ULH1 1129 aa15.31■□□□□ 0.04
ZNF239-202ENST00000374446 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
ZNF239-202ENST00000374446 BCL9O00512 1426 aa15.3■□□□□ 0.04
ZNF239-202ENST00000374446 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
ZNF239-202ENST00000374446 FKBP5Q13451 457 aaPredicted RBP15.3■□□□□ 0.04
ZNF239-202ENST00000374446 FBXO41Q8TF61 875 aa15.29■□□□□ 0.04
ZNF239-202ENST00000374446 ACSBG1Q96GR2 724 aa15.29■□□□□ 0.04
ZNF239-202ENST00000374446 TOGARAM1Q9Y4F4 1720 aa15.29■□□□□ 0.04
ZNF239-202ENST00000374446 RGS12O14924 1447 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms