RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
C9orf43-202ENST00000374165 TEFQ10587 303 aa22.82■■□□□ 1.24
C9orf43-202ENST00000374165 FKBP8Q14318 412 aa22.82■■□□□ 1.24
C9orf43-202ENST00000374165 TAF7Q15545 349 aaPredicted RBP22.82■■□□□ 1.24
C9orf43-202ENST00000374165 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
C9orf43-202ENST00000374165 POTEAQ6S8J7 498 aa22.82■■□□□ 1.24
C9orf43-202ENST00000374165 MYH16Q9H6N6 1097 aa22.82■■□□□ 1.24
C9orf43-202ENST00000374165 SLC52A2Q9HAB3 445 aa22.81■■□□□ 1.24
C9orf43-202ENST00000374165 NEFLP07196 543 aa22.8■■□□□ 1.24
C9orf43-202ENST00000374165 RBM6P78332 1123 aaKnown RBP22.8■■□□□ 1.24
C9orf43-202ENST00000374165 KCNQ3O43525 872 aa22.79■■□□□ 1.24
C9orf43-202ENST00000374165 KRT24Q2M2I5 525 aa22.79■■□□□ 1.24
C9orf43-202ENST00000374165 EXOSC9Q06265 439 aaKnown RBP22.79■■□□□ 1.24
C9orf43-202ENST00000374165 TSPYL4Q9UJ04 414 aa22.79■■□□□ 1.24
C9orf43-202ENST00000374165 BRWD3Q6RI45 1802 aa22.79■■□□□ 1.24
C9orf43-202ENST00000374165 ITGB4P16144 1822 aa22.78■■□□□ 1.24
C9orf43-202ENST00000374165 CABP4P57796 275 aa22.77■■□□□ 1.24
C9orf43-202ENST00000374165 BTBD11A6QL63 1104 aa22.77■■□□□ 1.24
C9orf43-202ENST00000374165 TSPYL6Q8N831 410 aa22.77■■□□□ 1.24
C9orf43-202ENST00000374165 MRC1P22897 1456 aa22.77■■□□□ 1.24
C9orf43-202ENST00000374165 ERVV-2B6SEH9 535 aa22.76■■□□□ 1.23
C9orf43-202ENST00000374165 SLC39A6Q13433 755 aa22.76■■□□□ 1.23
C9orf43-202ENST00000374165 C8orf58Q8NAV2 365 aa22.76■■□□□ 1.23
C9orf43-202ENST00000374165 ELL2O00472 640 aaPredicted RBP22.75■■□□□ 1.23
C9orf43-202ENST00000374165 DOT1LQ8TEK3 1739 aa22.75■■□□□ 1.23
C9orf43-202ENST00000374165 KDM3BQ7LBC6 1761 aa22.75■■□□□ 1.23
C9orf43-202ENST00000374165 RXRBP28702 533 aa22.75■■□□□ 1.23
C9orf43-202ENST00000374165 ACSBG1Q96GR2 724 aa22.74■■□□□ 1.23
C9orf43-202ENST00000374165 PRIM1P49642 420 aaKnown RBP22.74■■□□□ 1.23
C9orf43-202ENST00000374165 KCNQ2O43526 872 aa22.72■■□□□ 1.23
C9orf43-202ENST00000374165 PIGBQ92521 554 aa22.72■■□□□ 1.23
C9orf43-202ENST00000374165 SYTL4Q96C24 671 aaPredicted RBP22.72■■□□□ 1.23
C9orf43-202ENST00000374165 BABAM1Q9NWV8 329 aa22.72■■□□□ 1.23
C9orf43-202ENST00000374165 PTF1AQ7RTS3 328 aa22.71■■□□□ 1.23
C9orf43-202ENST00000374165 ZNF790Q6PG37 636 aa22.7■■□□□ 1.23
C9orf43-202ENST00000374165 TMOD3Q9NYL9 352 aa22.7■■□□□ 1.23
C9orf43-202ENST00000374165 EIF4A1P60842 406 aaKnown RBP22.7■■□□□ 1.22
C9orf43-202ENST00000374165 BCL9O00512 1426 aa22.69■■□□□ 1.22
C9orf43-202ENST00000374165 VAMP4O75379 141 aa22.69■■□□□ 1.22
C9orf43-202ENST00000374165 RCAN3Q9UKA8 241 aa22.69■■□□□ 1.22
C9orf43-202ENST00000374165 ASAP1Q9ULH1 1129 aa22.69■■□□□ 1.22
C9orf43-202ENST00000374165 RGS12O14924 1447 aa22.68■■□□□ 1.22
C9orf43-202ENST00000374165 KRT27Q7Z3Y8 459 aa22.68■■□□□ 1.22
C9orf43-202ENST00000374165 TWISTNBQ3B726 338 aaPredicted RBP22.67■■□□□ 1.22
C9orf43-202ENST00000374165 SBF2Q86WG5 1849 aa22.66■■□□□ 1.22
C9orf43-202ENST00000374165 PRAMEF22A3QJZ6 481 aa22.66■■□□□ 1.22
C9orf43-202ENST00000374165 IRX6P78412 446 aaPredicted RBP22.66■■□□□ 1.22
C9orf43-202ENST00000374165 ZNF496Q96IT1 587 aaPredicted RBP22.66■■□□□ 1.22
C9orf43-202ENST00000374165 ATG3Q9NT62 314 aa22.65■■□□□ 1.22
C9orf43-202ENST00000374165 BCAR3O75815 825 aa22.65■■□□□ 1.22
C9orf43-202ENST00000374165 BCL2L13Q9BXK5 485 aa22.65■■□□□ 1.22
C9orf43-202ENST00000374165 PAPPAQ13219 1627 aa22.65■■□□□ 1.22
C9orf43-202ENST00000374165 TCERG1O14776 1098 aaKnown RBP22.64■■□□□ 1.22
C9orf43-202ENST00000374165 HEG1Q9ULI3 1381 aa22.64■■□□□ 1.22
C9orf43-202ENST00000374165 RARSP54136 660 aaKnown RBP22.64■■□□□ 1.21
C9orf43-202ENST00000374165 UBR2Q8IWV8 1755 aa22.63■■□□□ 1.21
C9orf43-202ENST00000374165 PTCD1O75127 700 aaKnown RBP22.63■■□□□ 1.21
C9orf43-202ENST00000374165 TTC5Q8N0Z6 440 aa22.63■■□□□ 1.21
C9orf43-202ENST00000374165 GIGYF1O75420 1035 aaPredicted RBP22.62■■□□□ 1.21
C9orf43-202ENST00000374165 KCPQ6ZWJ8 1503 aa22.61■■□□□ 1.21
C9orf43-202ENST00000374165 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
C9orf43-202ENST00000374165 SSH1Q8WYL5 1049 aa22.61■■□□□ 1.21
C9orf43-202ENST00000374165 NECTIN2Q92692 538 aa22.61■■□□□ 1.21
C9orf43-202ENST00000374165 C5P01031 1676 aa22.6■■□□□ 1.21
C9orf43-202ENST00000374165 CT47B1P0C2W7 299 aaPredicted RBP22.6■■□□□ 1.21
C9orf43-202ENST00000374165 NHSQ6T4R5 1651 aa22.59■■□□□ 1.21
C9orf43-202ENST00000374165 FMNL2Q96PY5 1086 aa22.58■■□□□ 1.21
C9orf43-202ENST00000374165 BTAF1O14981 1849 aa22.58■■□□□ 1.21
C9orf43-202ENST00000374165 FAM196AQ6ZSG2 479 aa22.58■■□□□ 1.2
C9orf43-202ENST00000374165 SLC4A9Q96Q91 983 aa22.58■■□□□ 1.2
C9orf43-202ENST00000374165 PLIN1O60240 522 aa22.57■■□□□ 1.2
C9orf43-202ENST00000374165 EIF2S2P20042 333 aaKnown RBP22.57■■□□□ 1.2
C9orf43-202ENST00000374165 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
C9orf43-202ENST00000374165 TRIM37O94972 964 aa22.55■■□□□ 1.2
C9orf43-202ENST00000374165 RBM42Q9BTD8 480 aaKnown RBP22.55■■□□□ 1.2
C9orf43-202ENST00000374165 SNRPA1P09661 255 aaKnown RBP22.55■■□□□ 1.2
C9orf43-202ENST00000374165 SMC4Q9NTJ3 1288 aa22.55■■□□□ 1.2
C9orf43-202ENST00000374165 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
C9orf43-202ENST00000374165 ZNF428Q96B54 188 aa22.53■■□□□ 1.2
C9orf43-202ENST00000374165 HOXB7P09629 217 aa22.53■■□□□ 1.2
C9orf43-202ENST00000374165 ALDH1L2Q3SY69 923 aa22.53■■□□□ 1.2
C9orf43-202ENST00000374165 ERICH6BQ5W0A0 696 aa22.53■■□□□ 1.2
C9orf43-202ENST00000374165 BCL11BQ9C0K0 894 aaPredicted RBP22.52■■□□□ 1.2
C9orf43-202ENST00000374165 PALLDQ8WX93 1383 aa22.52■■□□□ 1.2
C9orf43-202ENST00000374165 KCNQ4P56696 695 aa22.52■■□□□ 1.19
C9orf43-202ENST00000374165 MRPL50Q8N5N7 158 aaKnown RBP22.52■■□□□ 1.19
C9orf43-202ENST00000374165 ANXA1P04083 346 aa22.51■■□□□ 1.19
C9orf43-202ENST00000374165 SLC4A2P04920 1241 aa22.51■■□□□ 1.19
C9orf43-202ENST00000374165 FRAT1Q92837 279 aaPredicted RBP22.51■■□□□ 1.19
C9orf43-202ENST00000374165 SOS1Q07889 1333 aaPredicted RBP22.51■■□□□ 1.19
C9orf43-202ENST00000374165 PIP4K2AP48426 406 aaPredicted RBP22.5■■□□□ 1.19
C9orf43-202ENST00000374165 RRP1P56182 461 aaKnown RBP22.5■■□□□ 1.19
C9orf43-202ENST00000374165 CHPF2Q9P2E5 772 aa22.5■■□□□ 1.19
C9orf43-202ENST00000374165 PROSER3Q2NL68 480 aa22.5■■□□□ 1.19
C9orf43-202ENST00000374165 CCDC30Q5VVM6 783 aa22.5■■□□□ 1.19
C9orf43-202ENST00000374165 DNAJC10Q8IXB1 793 aa22.5■■□□□ 1.19
C9orf43-202ENST00000374165 TNNQ9UQP3 1299 aa22.5■■□□□ 1.19
C9orf43-202ENST00000374165 LOC102724428A0A0B4J2F2 783 aa22.49■■□□□ 1.19
C9orf43-202ENST00000374165 SIK1P57059 783 aa22.49■■□□□ 1.19
C9orf43-202ENST00000374165 G2E3Q7L622 706 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms