RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 FKBP4Q02790 459 aaKnown RBP eCLIP12.91□□□□□ -0.34
CSMD2-204ENST00000373380 AMOTL1Q8IY63 956 aa12.91□□□□□ -0.34
CSMD2-204ENST00000373380 TBC1D2BQ9UPU7 963 aa12.91□□□□□ -0.34
CSMD2-204ENST00000373380 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
CSMD2-204ENST00000373380 PRPF40BQ6NWY9 871 aaKnown RBP12.91□□□□□ -0.34
CSMD2-204ENST00000373380 CCDC47Q96A33 483 aaKnown RBP12.91□□□□□ -0.34
CSMD2-204ENST00000373380 KIF1BPQ96EK5 621 aa12.91□□□□□ -0.34
CSMD2-204ENST00000373380 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
CSMD2-204ENST00000373380 CCDC85AQ96PX6 553 aaPredicted RBP12.91□□□□□ -0.34
CSMD2-204ENST00000373380 ARGLU1Q9NWB6 273 aaPredicted RBP12.91□□□□□ -0.34
CSMD2-204ENST00000373380 CDC42BPBQ9Y5S2 1711 aa12.91□□□□□ -0.34
CSMD2-204ENST00000373380 IQGAP3Q86VI3 1631 aa12.91□□□□□ -0.34
CSMD2-204ENST00000373380 THEMISQ8N1K5 641 aaPredicted RBP12.91□□□□□ -0.34
CSMD2-204ENST00000373380 C14orf93Q9H972 538 aaKnown RBP12.91□□□□□ -0.34
CSMD2-204ENST00000373380 CD109Q6YHK3 1445 aa12.9□□□□□ -0.34
CSMD2-204ENST00000373380 ZC3H6P61129 1189 aaKnown RBP12.9□□□□□ -0.34
CSMD2-204ENST00000373380 CAMK4Q16566 473 aa12.9□□□□□ -0.34
CSMD2-204ENST00000373380 STRN4Q9NRL3 753 aa12.9□□□□□ -0.34
CSMD2-204ENST00000373380 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
CSMD2-204ENST00000373380 NOS1P29475 1434 aa12.9□□□□□ -0.34
CSMD2-204ENST00000373380 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
CSMD2-204ENST00000373380 CCDC70Q6NSX1 233 aa12.9□□□□□ -0.34
CSMD2-204ENST00000373380 NUP62CLQ9H1M0 184 aa12.9□□□□□ -0.34
CSMD2-204ENST00000373380 MBIPQ9NS73 344 aa12.9□□□□□ -0.34
CSMD2-204ENST00000373380 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
CSMD2-204ENST00000373380 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
CSMD2-204ENST00000373380 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.35
CSMD2-204ENST00000373380 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.35
CSMD2-204ENST00000373380 CHD1O14646 1710 aa12.89□□□□□ -0.35
CSMD2-204ENST00000373380 PLEKHH1Q9ULM0 1364 aa12.89□□□□□ -0.35
CSMD2-204ENST00000373380 SEC24BO95487 1268 aa12.89□□□□□ -0.35
CSMD2-204ENST00000373380 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
CSMD2-204ENST00000373380 ABCC1P33527 1531 aa12.89□□□□□ -0.35
CSMD2-204ENST00000373380 ZMYM4Q5VZL5 1548 aa12.89□□□□□ -0.35
CSMD2-204ENST00000373380 ASXL2Q76L83 1435 aa12.89□□□□□ -0.35
CSMD2-204ENST00000373380 GLRX3O76003 335 aaKnown RBP12.89□□□□□ -0.35
CSMD2-204ENST00000373380 CALRP27797 417 aaKnown RBP12.89□□□□□ -0.35
CSMD2-204ENST00000373380 CABP4P57796 275 aa12.89□□□□□ -0.35
CSMD2-204ENST00000373380 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
CSMD2-204ENST00000373380 BAG4O95429 457 aaKnown RBP12.88□□□□□ -0.35
CSMD2-204ENST00000373380 SART3Q15020 963 aaKnown RBP12.88□□□□□ -0.35
CSMD2-204ENST00000373380 ATP7AQ04656 1500 aa12.88□□□□□ -0.35
CSMD2-204ENST00000373380 TTC39AQ5SRH9 613 aa12.88□□□□□ -0.35
CSMD2-204ENST00000373380 FAM177A1Q8N128 213 aaPredicted RBP12.88□□□□□ -0.35
CSMD2-204ENST00000373380 PANK2Q9BZ23 570 aa12.88□□□□□ -0.35
CSMD2-204ENST00000373380 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
CSMD2-204ENST00000373380 SPG7Q9UQ90 795 aa12.88□□□□□ -0.35
CSMD2-204ENST00000373380 SERPINC1P01008 464 aa12.88□□□□□ -0.35
CSMD2-204ENST00000373380 CCDC112Q8NEF3 446 aa12.88□□□□□ -0.35
CSMD2-204ENST00000373380 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
CSMD2-204ENST00000373380 CCDC8Q9H0W5 538 aaPredicted RBP12.88□□□□□ -0.35
CSMD2-204ENST00000373380 XBP1P17861 261 aa12.87□□□□□ -0.35
CSMD2-204ENST00000373380 NAP1L1P55209 391 aaKnown RBP12.87□□□□□ -0.35
CSMD2-204ENST00000373380 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
CSMD2-204ENST00000373380 FLIIQ13045 1269 aa12.87□□□□□ -0.35
CSMD2-204ENST00000373380 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
CSMD2-204ENST00000373380 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
CSMD2-204ENST00000373380 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
CSMD2-204ENST00000373380 USP25Q9UHP3 1055 aa12.86□□□□□ -0.35
CSMD2-204ENST00000373380 ZNF518AQ6AHZ1 1483 aa12.86□□□□□ -0.35
CSMD2-204ENST00000373380 RAB11FIP3O75154 756 aa12.86□□□□□ -0.35
CSMD2-204ENST00000373380 HDAC1Q13547 482 aaPredicted RBP12.86□□□□□ -0.35
CSMD2-204ENST00000373380 MAGI2Q86UL8 1455 aa12.86□□□□□ -0.35
CSMD2-204ENST00000373380 MAP3K11Q16584 847 aa12.86□□□□□ -0.35
CSMD2-204ENST00000373380 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
CSMD2-204ENST00000373380 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
CSMD2-204ENST00000373380 PTPRTO14522 1441 aa12.86□□□□□ -0.35
CSMD2-204ENST00000373380 TRPM2O94759 1503 aa12.86□□□□□ -0.35
CSMD2-204ENST00000373380 XRCC6P12956 609 aaKnown RBP eCLIP12.85□□□□□ -0.35
CSMD2-204ENST00000373380 NUCB1Q02818 461 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
CSMD2-204ENST00000373380 MEIS3Q99687 375 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 CARD14Q9BXL6 1004 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 HSP90B2PQ58FF3 399 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 TOM1L2Q6ZVM7 507 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 CFAP45Q9UL16 551 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 ANXA1P04083 346 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
CSMD2-204ENST00000373380 POLR3AO14802 1390 aaPredicted RBP12.84□□□□□ -0.35
CSMD2-204ENST00000373380 ERCC6L2Q5T890 1561 aa12.84□□□□□ -0.35
CSMD2-204ENST00000373380 KIF6Q6ZMV9 814 aa12.84□□□□□ -0.35
CSMD2-204ENST00000373380 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
CSMD2-204ENST00000373380 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
CSMD2-204ENST00000373380 CKAP2LQ8IYA6 745 aa12.84□□□□□ -0.35
CSMD2-204ENST00000373380 TFIP11Q9UBB9 837 aaKnown RBP12.84□□□□□ -0.35
CSMD2-204ENST00000373380 ZCCHC11Q5TAX3 1644 aaKnown RBP12.84□□□□□ -0.35
CSMD2-204ENST00000373380 SDSP20132 328 aa12.84□□□□□ -0.35
CSMD2-204ENST00000373380 KRT32Q14532 448 aa12.84□□□□□ -0.35
CSMD2-204ENST00000373380 TTC22Q5TAA0 569 aa12.84□□□□□ -0.35
CSMD2-204ENST00000373380 CEP57L1Q8IYX8 460 aa12.83□□□□□ -0.35
CSMD2-204ENST00000373380 C8orf58Q8NAV2 365 aa12.83□□□□□ -0.35
CSMD2-204ENST00000373380 NUP133Q8WUM0 1156 aa12.83□□□□□ -0.35
CSMD2-204ENST00000373380 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.35
CSMD2-204ENST00000373380 LIMCH1Q9UPQ0 1083 aa12.83□□□□□ -0.36
CSMD2-204ENST00000373380 GUCY1B3Q02153 619 aa12.83□□□□□ -0.36
CSMD2-204ENST00000373380 HSP90AB2PQ58FF8 381 aa12.83□□□□□ -0.36
CSMD2-204ENST00000373380 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.83□□□□□ -0.36
CSMD2-204ENST00000373380 PPFIA3O75145 1194 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms