RNA–Protein interactions for RNA: ENST00000372275.5

TMEM254-203, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-203ENST00000372275 BCS1LQ9Y276 419 aa13.04□□□□□ -0.32
TMEM254-203ENST00000372275 PCDH11XQ9BZA7 1347 aa13.04□□□□□ -0.32
TMEM254-203ENST00000372275 PCDH11YQ9BZA8 1340 aa13.04□□□□□ -0.32
TMEM254-203ENST00000372275 COL5A3P25940 1745 aaPredicted RBP13.04□□□□□ -0.32
TMEM254-203ENST00000372275 ARFGEF1Q9Y6D6 1849 aa13.04□□□□□ -0.32
TMEM254-203ENST00000372275 SMG6Q86US8 1419 aaKnown RBP13.04□□□□□ -0.32
TMEM254-203ENST00000372275 SBF1O95248 1867 aa13.04□□□□□ -0.32
TMEM254-203ENST00000372275 ST20-MTHFSA0A0A6YYL1 179 aa13.03□□□□□ -0.32
TMEM254-203ENST00000372275 A0A0G2JLW4 131 aa13.03□□□□□ -0.32
TMEM254-203ENST00000372275 GNPATO15228 680 aa13.03□□□□□ -0.32
TMEM254-203ENST00000372275 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
TMEM254-203ENST00000372275 TESK2Q96S53 571 aa13.02□□□□□ -0.33
TMEM254-203ENST00000372275 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
TMEM254-203ENST00000372275 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
TMEM254-203ENST00000372275 RTL1A6NKG5 1358 aa13.02□□□□□ -0.33
TMEM254-203ENST00000372275 FYB1O15117 783 aa13.01□□□□□ -0.33
TMEM254-203ENST00000372275 PPM1GO15355 546 aaPredicted RBP13.01□□□□□ -0.33
TMEM254-203ENST00000372275 MMP10P09238 476 aa13.01□□□□□ -0.33
TMEM254-203ENST00000372275 ANKRD26Q9UPS8 1709 aa13.01□□□□□ -0.33
TMEM254-203ENST00000372275 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
TMEM254-203ENST00000372275 KCPQ6ZWJ8 1503 aa13□□□□□ -0.33
TMEM254-203ENST00000372275 LOC102724428A0A0B4J2F2 783 aa13□□□□□ -0.33
TMEM254-203ENST00000372275 SIK1P57059 783 aa13□□□□□ -0.33
TMEM254-203ENST00000372275 COL13A1Q5TAT6 717 aaPredicted RBP13□□□□□ -0.33
TMEM254-203ENST00000372275 ARHGAP27Q6ZUM4 889 aa13□□□□□ -0.33
TMEM254-203ENST00000372275 DNAJC5GQ8N7S2 189 aa13□□□□□ -0.33
TMEM254-203ENST00000372275 PCNTO95613 3336 aa13□□□□□ -0.33
TMEM254-203ENST00000372275 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
TMEM254-203ENST00000372275 FLAD1Q8NFF5 587 aa12.99□□□□□ -0.33
TMEM254-203ENST00000372275 INSRP06213 1382 aa12.98□□□□□ -0.33
TMEM254-203ENST00000372275 DPEP1P16444 411 aa12.98□□□□□ -0.33
TMEM254-203ENST00000372275 CACNA1SQ13698 1873 aa12.97□□□□□ -0.33
TMEM254-203ENST00000372275 AFDNP55196 1824 aaKnown RBP12.97□□□□□ -0.33
TMEM254-203ENST00000372275 FLT4P35916 1363 aa12.97□□□□□ -0.33
TMEM254-203ENST00000372275 TONSLQ96HA7 1378 aa12.97□□□□□ -0.33
TMEM254-203ENST00000372275 FCHSD2O94868 740 aa12.97□□□□□ -0.33
TMEM254-203ENST00000372275 APLP1P51693 650 aa12.97□□□□□ -0.33
TMEM254-203ENST00000372275 SLC4A9Q96Q91 983 aa12.97□□□□□ -0.33
TMEM254-203ENST00000372275 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
TMEM254-203ENST00000372275 SSFA2P28290 1259 aa12.96□□□□□ -0.33
TMEM254-203ENST00000372275 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
TMEM254-203ENST00000372275 TMOD3Q9NYL9 352 aa12.96□□□□□ -0.33
TMEM254-203ENST00000372275 TJP1Q07157 1748 aa12.96□□□□□ -0.34
TMEM254-203ENST00000372275 TIAM2Q8IVF5 1701 aa12.96□□□□□ -0.34
TMEM254-203ENST00000372275 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.34
TMEM254-203ENST00000372275 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
TMEM254-203ENST00000372275 TOMM70O94826 608 aa12.95□□□□□ -0.34
TMEM254-203ENST00000372275 C9orf131Q5VYM1 1079 aa12.95□□□□□ -0.34
TMEM254-203ENST00000372275 ATG3Q9NT62 314 aa12.95□□□□□ -0.34
TMEM254-203ENST00000372275 NSD3Q9BZ95 1437 aa12.95□□□□□ -0.34
TMEM254-203ENST00000372275 SRP68Q9UHB9 627 aaKnown RBP12.94□□□□□ -0.34
TMEM254-203ENST00000372275 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
TMEM254-203ENST00000372275 EYA1Q99502 592 aa12.93□□□□□ -0.34
TMEM254-203ENST00000372275 CARD14Q9BXL6 1004 aa12.93□□□□□ -0.34
TMEM254-203ENST00000372275 RRAGCQ9HB90 399 aa12.93□□□□□ -0.34
TMEM254-203ENST00000372275 KDRP35968 1356 aa12.93□□□□□ -0.34
TMEM254-203ENST00000372275 PHKG2P15735 406 aa12.92□□□□□ -0.34
TMEM254-203ENST00000372275 CHRNA5P30532 468 aa12.92□□□□□ -0.34
TMEM254-203ENST00000372275 RASSF7Q02833 373 aa12.92□□□□□ -0.34
TMEM254-203ENST00000372275 ARHGEF1Q92888 912 aaKnown RBP12.92□□□□□ -0.34
TMEM254-203ENST00000372275 NCAPD2Q15021 1401 aa12.91□□□□□ -0.34
TMEM254-203ENST00000372275 KCNA3P22001 575 aa12.91□□□□□ -0.34
TMEM254-203ENST00000372275 KLRG1Q96E93 195 aa12.91□□□□□ -0.34
TMEM254-203ENST00000372275 RNF181Q9P0P0 153 aa12.91□□□□□ -0.34
TMEM254-203ENST00000372275 ADAMTS7Q9UKP4 1686 aa12.91□□□□□ -0.34
TMEM254-203ENST00000372275 GYS1P13807 737 aa12.9□□□□□ -0.34
TMEM254-203ENST00000372275 TMF1P82094 1093 aa12.9□□□□□ -0.34
TMEM254-203ENST00000372275 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
TMEM254-203ENST00000372275 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
TMEM254-203ENST00000372275 C16orf71Q8IYS4 520 aaPredicted RBP12.9□□□□□ -0.34
TMEM254-203ENST00000372275 POLR3GLQ9BT43 218 aa12.9□□□□□ -0.34
TMEM254-203ENST00000372275 SPG7Q9UQ90 795 aa12.9□□□□□ -0.34
TMEM254-203ENST00000372275 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
TMEM254-203ENST00000372275 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
TMEM254-203ENST00000372275 DDR1Q08345 913 aa12.89□□□□□ -0.35
TMEM254-203ENST00000372275 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
TMEM254-203ENST00000372275 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
TMEM254-203ENST00000372275 CCDC87Q9NVE4 849 aa12.89□□□□□ -0.35
TMEM254-203ENST00000372275 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
TMEM254-203ENST00000372275 SCN11AQ9UI33 1791 aa12.89□□□□□ -0.35
TMEM254-203ENST00000372275 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
TMEM254-203ENST00000372275 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
TMEM254-203ENST00000372275 FKBP8Q14318 412 aa12.88□□□□□ -0.35
TMEM254-203ENST00000372275 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
TMEM254-203ENST00000372275 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
TMEM254-203ENST00000372275 RFC4P35249 363 aa12.87□□□□□ -0.35
TMEM254-203ENST00000372275 TGFB2P61812 414 aa12.87□□□□□ -0.35
TMEM254-203ENST00000372275 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
TMEM254-203ENST00000372275 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
TMEM254-203ENST00000372275 PRELPP51888 382 aa12.86□□□□□ -0.35
TMEM254-203ENST00000372275 EIF4A2Q14240 407 aaKnown RBP12.86□□□□□ -0.35
TMEM254-203ENST00000372275 ANKRD31Q8N7Z5 1873 aa12.86□□□□□ -0.35
TMEM254-203ENST00000372275 COL11A2P13942 1736 aaPredicted RBP12.85□□□□□ -0.35
TMEM254-203ENST00000372275 AEBP1Q8IUX7 1158 aa12.85□□□□□ -0.35
TMEM254-203ENST00000372275 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
TMEM254-203ENST00000372275 HSPA1AP0DMV8 641 aaKnown RBP12.84□□□□□ -0.35
TMEM254-203ENST00000372275 HSPA1BP0DMV9 641 aaKnown RBP12.84□□□□□ -0.35
TMEM254-203ENST00000372275 DALRD3Q5D0E6 543 aaKnown RBP12.84□□□□□ -0.35
TMEM254-203ENST00000372275 DCAF5Q96JK2 942 aa12.84□□□□□ -0.35
TMEM254-203ENST00000372275 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms