RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CTNNA2P26232 953 aa17.74■□□□□ 0.43
GTF3C4-201ENST00000372146 GGT6Q6P531 493 aa17.74■□□□□ 0.43
GTF3C4-201ENST00000372146 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 NOL7Q9UMY1 257 aaKnown RBP17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 ADCY5O95622 1261 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 MAP4K4O95819 1239 aaPredicted RBP17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 PRPF4BQ13523 1007 aaKnown RBP17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 BMP2KQ9NSY1 1161 aaPredicted RBP17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 ANAPC4Q9UJX5 808 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 SREK1Q8WXA9 508 aaKnown RBP17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 ATRIPQ8WXE1 791 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 RUNDC1Q96C34 613 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 TPD52P55327 224 aaPredicted RBP17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 CCDC174Q6PII3 467 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 CCDC171Q6TFL3 1326 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 CDKL5O76039 1030 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 CCDC96Q2M329 555 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
GTF3C4-201ENST00000372146 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 RFC1P35251 1148 aaPredicted RBP17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 CIZ1Q9ULV3 898 aaPredicted RBP17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 SEPT14Q6ZU15 432 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 PDZRN3Q9UPQ7 1066 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 A0A1B0GUL7 405 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 CCDC114Q96M63 670 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 EBAG9O00559 213 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 MCM5P33992 734 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 ANKRD30AQ9BXX3 1397 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 GSDMDP57764 484 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 TSPYL4Q9UJ04 414 aa17.72■□□□□ 0.43
GTF3C4-201ENST00000372146 SMC6Q96SB8 1091 aa17.71■□□□□ 0.43
GTF3C4-201ENST00000372146 CLNS1AP54105 237 aaKnown RBP17.71■□□□□ 0.43
GTF3C4-201ENST00000372146 CCDC155Q8N6L0 562 aa17.71■□□□□ 0.43
GTF3C4-201ENST00000372146 ANO10Q9NW15 660 aa17.71■□□□□ 0.43
GTF3C4-201ENST00000372146 RAB3IL1Q8TBN0 382 aa17.71■□□□□ 0.43
GTF3C4-201ENST00000372146 TSNARE1Q96NA8 513 aa17.71■□□□□ 0.43
GTF3C4-201ENST00000372146 USP25Q9UHP3 1055 aa17.71■□□□□ 0.43
GTF3C4-201ENST00000372146 NEMFO60524 1076 aa17.71■□□□□ 0.43
GTF3C4-201ENST00000372146 AIMP1Q12904 312 aaKnown RBP17.71■□□□□ 0.43
GTF3C4-201ENST00000372146 VPS18Q9P253 973 aa17.71■□□□□ 0.42
GTF3C4-201ENST00000372146 ERCC3P19447 782 aa17.7■□□□□ 0.42
GTF3C4-201ENST00000372146 ATP11AP98196 1134 aa17.7■□□□□ 0.42
GTF3C4-201ENST00000372146 BUB1BO60566 1050 aaPredicted RBP17.7■□□□□ 0.42
GTF3C4-201ENST00000372146 KRBA2Q6ZNG9 492 aa17.7■□□□□ 0.42
GTF3C4-201ENST00000372146 TMC6Q7Z403 805 aa17.7■□□□□ 0.42
GTF3C4-201ENST00000372146 PPM1FP49593 454 aaPredicted RBP17.7■□□□□ 0.42
GTF3C4-201ENST00000372146 DNAJC21Q5F1R6 531 aaKnown RBP17.7■□□□□ 0.42
GTF3C4-201ENST00000372146 RBM28Q9NW13 759 aaKnown RBP17.7■□□□□ 0.42
GTF3C4-201ENST00000372146 CCDC57Q2TAC2 916 aa17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 SYTL4Q96C24 671 aaPredicted RBP17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 GOLIM4O00461 696 aa17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 ZNF853P0CG23 659 aa17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 CASTP20810 708 aaKnown RBP17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 PDRG1Q9NUG6 133 aa17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 CEP131Q9UPN4 1083 aa17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 ZBTB16Q05516 673 aa17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 WHAMMQ8TF30 809 aa17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 STIM2Q9P246 746 aa17.69■□□□□ 0.42
GTF3C4-201ENST00000372146 YEATS4O95619 227 aa17.68■□□□□ 0.42
GTF3C4-201ENST00000372146 CKAP4Q07065 602 aaKnown RBP17.68■□□□□ 0.42
GTF3C4-201ENST00000372146 TACC1O75410 805 aa17.68■□□□□ 0.42
GTF3C4-201ENST00000372146 IQCGQ9H095 443 aaKnown RBP17.68■□□□□ 0.42
GTF3C4-201ENST00000372146 TTC39AQ5SRH9 613 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 ZEB2O60315 1214 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 CEP128Q6ZU80 1094 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 MRVI1Q9Y6F6 885 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 MAP7D1Q3KQU3 841 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 EVA1CP58658 441 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 FAM160A1Q05DH4 1040 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 ZBTB9Q96C00 473 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 TRAK1Q9UPV9 953 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 TDRD12Q587J7 1177 aaKnown RBP17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 PCK1P35558 622 aa17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
GTF3C4-201ENST00000372146 DIAPH1O60610 1272 aaKnown RBP17.66■□□□□ 0.42
GTF3C4-201ENST00000372146 LRCH2Q5VUJ6 765 aa17.66■□□□□ 0.42
GTF3C4-201ENST00000372146 TSG101Q99816 390 aa17.66■□□□□ 0.42
GTF3C4-201ENST00000372146 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.66■□□□□ 0.42
GTF3C4-201ENST00000372146 RABGAP1Q9Y3P9 1069 aa17.66■□□□□ 0.42
GTF3C4-201ENST00000372146 STMN2Q93045 179 aa17.66■□□□□ 0.42
GTF3C4-201ENST00000372146 CPLX3Q8WVH0 158 aa17.66■□□□□ 0.42
GTF3C4-201ENST00000372146 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
GTF3C4-201ENST00000372146 GNAI1P63096 354 aa17.66■□□□□ 0.42
GTF3C4-201ENST00000372146 CCDC144AA2RUR9 1427 aa17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 CCDC170Q8IYT3 715 aa17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 LUC7L2Q9Y383 392 aaKnown RBP17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 LACTBP83111 547 aaPredicted RBP17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 GCC1Q96CN9 775 aa17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 EVC2Q86UK5 1308 aa17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 OPA1O60313 960 aa17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 CKAP2LQ8IYA6 745 aa17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 MKRN1Q9UHC7 482 aaKnown RBP17.65■□□□□ 0.42
GTF3C4-201ENST00000372146 GBP1P32455 592 aa17.64■□□□□ 0.41
GTF3C4-201ENST00000372146 PPP1R12CQ9BZL4 782 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms