RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 EIF3JO75822 258 aaKnown RBP25.93■■□□□ 1.74
TM9SF3-201ENST00000371142 SSR1P43307 286 aaKnown RBP25.93■■□□□ 1.74
TM9SF3-201ENST00000371142 WAPLQ7Z5K2 1190 aa25.92■■□□□ 1.74
TM9SF3-201ENST00000371142 TROQ12816 1431 aaPredicted RBP25.92■■□□□ 1.74
TM9SF3-201ENST00000371142 HECW1Q76N89 1606 aa25.92■■□□□ 1.74
TM9SF3-201ENST00000371142 IQCEQ6IPM2 695 aa25.91■■□□□ 1.74
TM9SF3-201ENST00000371142 U3KPZ7 1027 aaPredicted RBP25.91■■□□□ 1.74
TM9SF3-201ENST00000371142 AKAP2Q9Y2D5 859 aa25.91■■□□□ 1.74
TM9SF3-201ENST00000371142 POLR3DP05423 398 aaPredicted RBP25.9■■□□□ 1.74
TM9SF3-201ENST00000371142 EFCAB5A4FU69 1503 aa25.9■■□□□ 1.74
TM9SF3-201ENST00000371142 GLRX3O76003 335 aaKnown RBP25.9■■□□□ 1.74
TM9SF3-201ENST00000371142 RAB11FIP3O75154 756 aa25.9■■□□□ 1.74
TM9SF3-201ENST00000371142 ARHGAP29Q52LW3 1261 aa25.9■■□□□ 1.74
TM9SF3-201ENST00000371142 HSP90AB3PQ58FF7 597 aa25.9■■□□□ 1.74
TM9SF3-201ENST00000371142 TAF4BQ92750 862 aa25.9■■□□□ 1.74
TM9SF3-201ENST00000371142 SEC63Q9UGP8 760 aaKnown RBP25.89■■□□□ 1.74
TM9SF3-201ENST00000371142 IFIT1P09914 478 aaKnown RBP25.89■■□□□ 1.74
TM9SF3-201ENST00000371142 CCDC102AQ96A19 550 aa25.89■■□□□ 1.74
TM9SF3-201ENST00000371142 WDR97A6NE52 1622 aa25.89■■□□□ 1.74
TM9SF3-201ENST00000371142 CCDC61Q9Y6R9 512 aa25.89■■□□□ 1.73
TM9SF3-201ENST00000371142 TMOD3Q9NYL9 352 aa25.89■■□□□ 1.73
TM9SF3-201ENST00000371142 GUCY1B3Q02153 619 aa25.89■■□□□ 1.73
TM9SF3-201ENST00000371142 KCNH5Q8NCM2 988 aa25.88■■□□□ 1.73
TM9SF3-201ENST00000371142 SKAP1Q86WV1 359 aa25.88■■□□□ 1.73
TM9SF3-201ENST00000371142 MKNK2Q9HBH9 465 aa25.87■■□□□ 1.73
TM9SF3-201ENST00000371142 CAVIN4Q5BKX8 364 aa25.87■■□□□ 1.73
TM9SF3-201ENST00000371142 KLHL10Q6JEL2 608 aa25.87■■□□□ 1.73
TM9SF3-201ENST00000371142 LARP1Q6PKG0 1096 aaKnown RBP25.87■■□□□ 1.73
TM9SF3-201ENST00000371142 CCDC8Q9H0W5 538 aaPredicted RBP25.87■■□□□ 1.73
TM9SF3-201ENST00000371142 TMOD2Q9NZR1 351 aa25.87■■□□□ 1.73
TM9SF3-201ENST00000371142 SYNJ1O43426 1573 aa25.87■■□□□ 1.73
TM9SF3-201ENST00000371142 F6X3S4 739 aa25.87■■□□□ 1.73
TM9SF3-201ENST00000371142 SSH1Q8WYL5 1049 aa25.87■■□□□ 1.73
TM9SF3-201ENST00000371142 ZNF397Q8NF99 534 aaPredicted RBP25.86■■□□□ 1.73
TM9SF3-201ENST00000371142 TAF3Q5VWG9 929 aa25.86■■□□□ 1.73
TM9SF3-201ENST00000371142 CCDC82Q8N4S0 544 aa25.86■■□□□ 1.73
TM9SF3-201ENST00000371142 NEBLO76041 1014 aa25.86■■□□□ 1.73
TM9SF3-201ENST00000371142 NAPBQ9H115 298 aa25.86■■□□□ 1.73
TM9SF3-201ENST00000371142 JAKMIP3Q5VZ66 844 aa25.85■■□□□ 1.73
TM9SF3-201ENST00000371142 CRACR2BQ8N4Y2 399 aaPredicted RBP25.85■■□□□ 1.73
TM9SF3-201ENST00000371142 SUPT6HQ7KZ85 1726 aaKnown RBP25.85■■□□□ 1.73
TM9SF3-201ENST00000371142 C20orf194Q5TEA3 1177 aa25.85■■□□□ 1.73
TM9SF3-201ENST00000371142 TAF7Q15545 349 aaPredicted RBP25.84■■□□□ 1.73
TM9SF3-201ENST00000371142 ZNF652Q9Y2D9 606 aa25.84■■□□□ 1.73
TM9SF3-201ENST00000371142 CCDC148Q8NFR7 591 aa25.84■■□□□ 1.73
TM9SF3-201ENST00000371142 GOLGA6L7A0A1B0GV03 622 aa25.84■■□□□ 1.73
TM9SF3-201ENST00000371142 GBP2P32456 591 aaPredicted RBP25.84■■□□□ 1.73
TM9SF3-201ENST00000371142 ANKIB1Q9P2G1 1089 aa25.84■■□□□ 1.73
TM9SF3-201ENST00000371142 ESPNB1AK53 854 aa25.84■■□□□ 1.73
TM9SF3-201ENST00000371142 NME9Q86XW9 330 aa25.84■■□□□ 1.73
TM9SF3-201ENST00000371142 ZPR1O75312 459 aa25.83■■□□□ 1.73
TM9SF3-201ENST00000371142 DESP17661 470 aa25.83■■□□□ 1.73
TM9SF3-201ENST00000371142 RARSP54136 660 aaKnown RBP25.83■■□□□ 1.73
TM9SF3-201ENST00000371142 ZNF287Q9HBT7 754 aa25.83■■□□□ 1.72
TM9SF3-201ENST00000371142 NCAPD3P42695 1498 aa25.83■■□□□ 1.72
TM9SF3-201ENST00000371142 RANBP6O60518 1105 aaKnown RBP25.82■■□□□ 1.72
TM9SF3-201ENST00000371142 DZIP1Q86YF9 867 aaKnown RBP25.82■■□□□ 1.72
TM9SF3-201ENST00000371142 MPRIPQ6WCQ1 1025 aa25.82■■□□□ 1.72
TM9SF3-201ENST00000371142 C8orf76Q96K31 380 aa25.82■■□□□ 1.72
TM9SF3-201ENST00000371142 UBA5Q9GZZ9 404 aa25.82■■□□□ 1.72
TM9SF3-201ENST00000371142 LARP6Q9BRS8 491 aaKnown RBP25.81■■□□□ 1.72
TM9SF3-201ENST00000371142 TIAM1Q13009 1591 aa25.81■■□□□ 1.72
TM9SF3-201ENST00000371142 CHMP4BP1P59074 171 aa25.81■■□□□ 1.72
TM9SF3-201ENST00000371142 NESP48681 1621 aa25.81■■□□□ 1.72
TM9SF3-201ENST00000371142 SNAPC4Q5SXM2 1469 aa25.81■■□□□ 1.72
TM9SF3-201ENST00000371142 PPP1R12BO60237 982 aaPredicted RBP25.81■■□□□ 1.72
TM9SF3-201ENST00000371142 PDIA4P13667 645 aaKnown RBP25.81■■□□□ 1.72
TM9SF3-201ENST00000371142 IFIT5Q13325 482 aaKnown RBP25.8■■□□□ 1.72
TM9SF3-201ENST00000371142 UBXN4Q92575 508 aa25.8■■□□□ 1.72
TM9SF3-201ENST00000371142 ALDH1L2Q3SY69 923 aa25.8■■□□□ 1.72
TM9SF3-201ENST00000371142 SPA17Q15506 151 aa25.8■■□□□ 1.72
TM9SF3-201ENST00000371142 ERICH4A6NGS2 130 aa25.79■■□□□ 1.72
TM9SF3-201ENST00000371142 TNIP1Q15025 636 aa25.79■■□□□ 1.72
TM9SF3-201ENST00000371142 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
TM9SF3-201ENST00000371142 SFPQP23246 707 aaKnown RBP eCLIP25.79■■□□□ 1.72
TM9SF3-201ENST00000371142 CCDC183Q5T5S1 534 aa25.79■■□□□ 1.72
TM9SF3-201ENST00000371142 ANO10Q9NW15 660 aa25.79■■□□□ 1.72
TM9SF3-201ENST00000371142 EMILIN1Q9Y6C2 1016 aa25.79■■□□□ 1.72
TM9SF3-201ENST00000371142 SLC12A7Q9Y666 1083 aa25.79■■□□□ 1.72
TM9SF3-201ENST00000371142 EZRP15311 586 aaKnown RBP25.78■■□□□ 1.72
TM9SF3-201ENST00000371142 POGZQ7Z3K3 1410 aa25.78■■□□□ 1.72
TM9SF3-201ENST00000371142 MAP3K12Q12852 859 aa25.78■■□□□ 1.72
TM9SF3-201ENST00000371142 CCDC96Q2M329 555 aa25.78■■□□□ 1.72
TM9SF3-201ENST00000371142 ZNF213O14771 459 aa25.78■■□□□ 1.72
TM9SF3-201ENST00000371142 CTCFLQ8NI51 663 aaPredicted RBP25.78■■□□□ 1.72
TM9SF3-201ENST00000371142 TSG101Q99816 390 aa25.78■■□□□ 1.72
TM9SF3-201ENST00000371142 TRMT112Q9UI30 125 aaKnown RBP25.78■■□□□ 1.72
TM9SF3-201ENST00000371142 FKBP15Q5T1M5 1219 aa25.77■■□□□ 1.72
TM9SF3-201ENST00000371142 CDK13Q14004 1512 aaKnown RBP25.77■■□□□ 1.72
TM9SF3-201ENST00000371142 POTEJP0CG39 1038 aa25.77■■□□□ 1.72
TM9SF3-201ENST00000371142 CCT2P78371 535 aaKnown RBP25.77■■□□□ 1.72
TM9SF3-201ENST00000371142 CACNA2D4Q7Z3S7 1137 aa25.76■■□□□ 1.72
TM9SF3-201ENST00000371142 DNAAF4Q8WXU2 420 aa25.76■■□□□ 1.71
TM9SF3-201ENST00000371142 IFT140Q96RY7 1462 aa25.76■■□□□ 1.71
TM9SF3-201ENST00000371142 SLC5A1P13866 664 aa25.76■■□□□ 1.71
TM9SF3-201ENST00000371142 ZNF444Q8N0Y2 327 aaPredicted RBP25.76■■□□□ 1.71
TM9SF3-201ENST00000371142 CCDC196A0A1B0GTZ2 297 aa25.76■■□□□ 1.71
TM9SF3-201ENST00000371142 PTPN14Q15678 1187 aa25.76■■□□□ 1.71
TM9SF3-201ENST00000371142 SCLT1Q96NL6 688 aa25.76■■□□□ 1.71
TM9SF3-201ENST00000371142 SCAND2PQ9GZW5 306 aaPredicted RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms