RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 ZCRB1Q8TBF4 217 aaKnown RBP14.28□□□□□ -0.12
EXOSC1-203ENST00000370886 TAF1LQ8IZX4 1826 aa14.27□□□□□ -0.13
EXOSC1-203ENST00000370886 MAP2P11137 1827 aaKnown RBP14.26□□□□□ -0.13
EXOSC1-203ENST00000370886 APLP1P51693 650 aa14.25□□□□□ -0.13
EXOSC1-203ENST00000370886 WDR43Q15061 677 aaKnown RBP eCLIP14.25□□□□□ -0.13
EXOSC1-203ENST00000370886 MRS2Q9HD23 443 aa14.25□□□□□ -0.13
EXOSC1-203ENST00000370886 SPG7Q9UQ90 795 aa14.25□□□□□ -0.13
EXOSC1-203ENST00000370886 MEGF6O75095 1541 aa14.25□□□□□ -0.13
EXOSC1-203ENST00000370886 RGPD2P0DJD1 1756 aa14.24□□□□□ -0.13
EXOSC1-203ENST00000370886 CCDC184Q52MB2 194 aa14.24□□□□□ -0.13
EXOSC1-203ENST00000370886 PLEKHO1Q53GL0 409 aaPredicted RBP14.24□□□□□ -0.13
EXOSC1-203ENST00000370886 KIF3CO14782 793 aa14.23□□□□□ -0.13
EXOSC1-203ENST00000370886 PRKAR2BP31323 418 aa14.23□□□□□ -0.13
EXOSC1-203ENST00000370886 COL3A1P02461 1466 aaPredicted RBP14.23□□□□□ -0.13
EXOSC1-203ENST00000370886 PALLDQ8WX93 1383 aa14.22□□□□□ -0.13
EXOSC1-203ENST00000370886 C4BP0C0L5 1744 aa14.22□□□□□ -0.13
EXOSC1-203ENST00000370886 ZNF530Q6P9A1 599 aaPredicted RBP14.22□□□□□ -0.13
EXOSC1-203ENST00000370886 CICQ96RK0 1608 aaPredicted RBP14.22□□□□□ -0.13
EXOSC1-203ENST00000370886 AK7Q96M32 723 aa14.21□□□□□ -0.13
EXOSC1-203ENST00000370886 UBR3Q6ZT12 1888 aa14.21□□□□□ -0.14
EXOSC1-203ENST00000370886 PCDH11XQ9BZA7 1347 aa14.2□□□□□ -0.14
EXOSC1-203ENST00000370886 PCDH11YQ9BZA8 1340 aa14.2□□□□□ -0.14
EXOSC1-203ENST00000370886 FCHSD2O94868 740 aa14.2□□□□□ -0.14
EXOSC1-203ENST00000370886 NEFMP07197 916 aa14.2□□□□□ -0.14
EXOSC1-203ENST00000370886 AMOTQ4VCS5 1084 aa14.2□□□□□ -0.14
EXOSC1-203ENST00000370886 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
EXOSC1-203ENST00000370886 RSPH6AQ9H0K4 717 aa14.2□□□□□ -0.14
EXOSC1-203ENST00000370886 CYP27B1O15528 508 aa14.19□□□□□ -0.14
EXOSC1-203ENST00000370886 TOMM70O94826 608 aa14.19□□□□□ -0.14
EXOSC1-203ENST00000370886 C1orf141Q5JVX7 400 aa14.19□□□□□ -0.14
EXOSC1-203ENST00000370886 MIER1Q8N108 512 aa14.19□□□□□ -0.14
EXOSC1-203ENST00000370886 SMARCC1Q92922 1105 aaPredicted RBP14.19□□□□□ -0.14
EXOSC1-203ENST00000370886 PHACTR3Q96KR7 559 aa14.19□□□□□ -0.14
EXOSC1-203ENST00000370886 ADAMTS8Q9UP79 889 aa14.19□□□□□ -0.14
EXOSC1-203ENST00000370886 TOGARAM1Q9Y4F4 1720 aa14.18□□□□□ -0.14
EXOSC1-203ENST00000370886 MTHFSDQ2M296 383 aaKnown RBP14.18□□□□□ -0.14
EXOSC1-203ENST00000370886 IFNL2Q8IZJ0 200 aa14.18□□□□□ -0.14
EXOSC1-203ENST00000370886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.18□□□□□ -0.14
EXOSC1-203ENST00000370886 WWC3Q9ULE0 1092 aa14.18□□□□□ -0.14
EXOSC1-203ENST00000370886 KDRP35968 1356 aa14.18□□□□□ -0.14
EXOSC1-203ENST00000370886 MAPK8IP3Q9UPT6 1336 aa14.17□□□□□ -0.14
EXOSC1-203ENST00000370886 NCAPD2Q15021 1401 aa14.17□□□□□ -0.14
EXOSC1-203ENST00000370886 PHF14O94880 888 aa14.17□□□□□ -0.14
EXOSC1-203ENST00000370886 PHKG2P15735 406 aa14.17□□□□□ -0.14
EXOSC1-203ENST00000370886 FAM9BQ8IZU0 186 aa14.17□□□□□ -0.14
EXOSC1-203ENST00000370886 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
EXOSC1-203ENST00000370886 ITGB4P16144 1822 aa14.17□□□□□ -0.14
EXOSC1-203ENST00000370886 WDR90Q96KV7 1748 aa14.16□□□□□ -0.14
EXOSC1-203ENST00000370886 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.16□□□□□ -0.14
EXOSC1-203ENST00000370886 SSFA2P28290 1259 aa14.16□□□□□ -0.14
EXOSC1-203ENST00000370886 MPRIPQ6WCQ1 1025 aa14.16□□□□□ -0.14
EXOSC1-203ENST00000370886 DNAJC5GQ8N7S2 189 aa14.15□□□□□ -0.14
EXOSC1-203ENST00000370886 GAS2L2Q8NHY3 880 aa14.15□□□□□ -0.14
EXOSC1-203ENST00000370886 KIF13BQ9NQT8 1826 aa14.14□□□□□ -0.15
EXOSC1-203ENST00000370886 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
EXOSC1-203ENST00000370886 PNISRQ8TF01 805 aaKnown RBP14.14□□□□□ -0.15
EXOSC1-203ENST00000370886 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
EXOSC1-203ENST00000370886 HSP90AB1P08238 724 aaKnown RBP14.13□□□□□ -0.15
EXOSC1-203ENST00000370886 AKAP4Q5JQC9 854 aa14.13□□□□□ -0.15
EXOSC1-203ENST00000370886 PXDNLA1KZ92 1463 aa14.12□□□□□ -0.15
EXOSC1-203ENST00000370886 GNAT3A8MTJ3 354 aa14.12□□□□□ -0.15
EXOSC1-203ENST00000370886 CABP4P57796 275 aa14.12□□□□□ -0.15
EXOSC1-203ENST00000370886 AMIGO3Q86WK7 504 aa14.12□□□□□ -0.15
EXOSC1-203ENST00000370886 C16orf71Q8IYS4 520 aaPredicted RBP14.12□□□□□ -0.15
EXOSC1-203ENST00000370886 RTF1Q92541 710 aaKnown RBP14.12□□□□□ -0.15
EXOSC1-203ENST00000370886 DCAF5Q96JK2 942 aa14.12□□□□□ -0.15
EXOSC1-203ENST00000370886 PLEKHF1Q96S99 279 aa14.12□□□□□ -0.15
EXOSC1-203ENST00000370886 PKD1L3Q7Z443 1732 aa14.12□□□□□ -0.15
EXOSC1-203ENST00000370886 PLEKHG2Q9H7P9 1386 aa14.11□□□□□ -0.15
EXOSC1-203ENST00000370886 TGFB2P61812 414 aa14.11□□□□□ -0.15
EXOSC1-203ENST00000370886 RBM46Q8TBY0 533 aaKnown RBP14.11□□□□□ -0.15
EXOSC1-203ENST00000370886 RUNDC1Q96C34 613 aa14.11□□□□□ -0.15
EXOSC1-203ENST00000370886 LGR6Q9HBX8 967 aa14.11□□□□□ -0.15
EXOSC1-203ENST00000370886 BCS1LQ9Y276 419 aa14.11□□□□□ -0.15
EXOSC1-203ENST00000370886 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
EXOSC1-203ENST00000370886 LOC102724428A0A0B4J2F2 783 aa14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 GNPATO15228 680 aa14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 MMP10P09238 476 aa14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 SIK1P57059 783 aa14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 DCTN1Q14203 1278 aa14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 NKX1-1Q15270 411 aaPredicted RBP14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 NFE2L2Q16236 605 aa14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 KLRG1Q96E93 195 aa14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 TMOD3Q9NYL9 352 aa14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 KIAA1551Q9HCM1 1747 aa14.1□□□□□ -0.15
EXOSC1-203ENST00000370886 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
EXOSC1-203ENST00000370886 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
EXOSC1-203ENST00000370886 RIPK4P57078 832 aa14.09□□□□□ -0.15
EXOSC1-203ENST00000370886 MCM10Q7L590 875 aa14.09□□□□□ -0.15
EXOSC1-203ENST00000370886 NMRK2Q9NPI5 230 aa14.09□□□□□ -0.15
EXOSC1-203ENST00000370886 C10orf71Q711Q0 1435 aa14.08□□□□□ -0.15
EXOSC1-203ENST00000370886 APAF1O14727 1248 aa14.08□□□□□ -0.16
EXOSC1-203ENST00000370886 FSTL1Q12841 308 aa14.08□□□□□ -0.16
EXOSC1-203ENST00000370886 ARHGAP27Q6ZUM4 889 aa14.08□□□□□ -0.16
EXOSC1-203ENST00000370886 JMYQ8N9B5 988 aa14.08□□□□□ -0.16
EXOSC1-203ENST00000370886 NFATC2IPQ8NCF5 419 aa14.08□□□□□ -0.16
EXOSC1-203ENST00000370886 LINC00116Q8NCU8 138 aa14.08□□□□□ -0.16
EXOSC1-203ENST00000370886 PIGBQ92521 554 aa14.08□□□□□ -0.16
EXOSC1-203ENST00000370886 SALL2Q9Y467 1007 aaPredicted RBP14.08□□□□□ -0.16
EXOSC1-203ENST00000370886 BRCA1P38398 1863 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms