RNA–Protein interactions for RNA: ENST00000370664.3

UBTD1-201, Transcript of ubiquitin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBTD1, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTD1-201ENST00000370664 TOM1O60784 492 aa29.87■■■□□ 2.37
UBTD1-201ENST00000370664 STRN4Q9NRL3 753 aa29.86■■■□□ 2.37
UBTD1-201ENST00000370664 PARP4Q9UKK3 1724 aaKnown RBP29.86■■■□□ 2.37
UBTD1-201ENST00000370664 RWDD1Q9H446 243 aaPredicted RBP29.85■■■□□ 2.37
UBTD1-201ENST00000370664 SIPA1L3O60292 1781 aaPredicted RBP29.84■■■□□ 2.37
UBTD1-201ENST00000370664 PHLPP1O60346 1717 aa29.84■■■□□ 2.37
UBTD1-201ENST00000370664 KDM6AO15550 1401 aaPredicted RBP29.84■■■□□ 2.37
UBTD1-201ENST00000370664 HOXB7P09629 217 aa29.84■■■□□ 2.37
UBTD1-201ENST00000370664 SCN11AQ9UI33 1791 aa29.84■■■□□ 2.37
UBTD1-201ENST00000370664 RGS12O14924 1447 aa29.83■■■□□ 2.37
UBTD1-201ENST00000370664 LARP1Q6PKG0 1096 aaKnown RBP29.83■■■□□ 2.37
UBTD1-201ENST00000370664 CYP27B1O15528 508 aa29.82■■■□□ 2.36
UBTD1-201ENST00000370664 KCNQ3O43525 872 aa29.82■■■□□ 2.36
UBTD1-201ENST00000370664 HSP90AB1P08238 724 aaKnown RBP29.82■■■□□ 2.36
UBTD1-201ENST00000370664 CHMP4AQ9BY43 222 aa29.82■■■□□ 2.36
UBTD1-201ENST00000370664 COL14A1Q05707 1796 aaKnown RBP29.82■■■□□ 2.36
UBTD1-201ENST00000370664 ZBTB7BO15156 539 aaPredicted RBP29.82■■■□□ 2.36
UBTD1-201ENST00000370664 COL16A1Q07092 1604 aaPredicted RBP29.81■■■□□ 2.36
UBTD1-201ENST00000370664 INTS3Q68E01 1043 aaKnown RBP29.81■■■□□ 2.36
UBTD1-201ENST00000370664 DCAF5Q96JK2 942 aa29.81■■■□□ 2.36
UBTD1-201ENST00000370664 SLC52A2Q9HAB3 445 aa29.8■■■□□ 2.36
UBTD1-201ENST00000370664 IL2RBP14784 551 aa29.79■■■□□ 2.36
UBTD1-201ENST00000370664 HDGFL1Q5TGJ6 251 aa29.79■■■□□ 2.36
UBTD1-201ENST00000370664 G2E3Q7L622 706 aa29.79■■■□□ 2.36
UBTD1-201ENST00000370664 ZCRB1Q8TBF4 217 aaKnown RBP29.79■■■□□ 2.36
UBTD1-201ENST00000370664 BTG4Q9NY30 223 aa29.79■■■□□ 2.36
UBTD1-201ENST00000370664 NECTIN2Q92692 538 aa29.79■■■□□ 2.36
UBTD1-201ENST00000370664 PIP4K2BP78356 416 aa29.78■■■□□ 2.36
UBTD1-201ENST00000370664 PCDH11XQ9BZA7 1347 aa29.77■■■□□ 2.36
UBTD1-201ENST00000370664 PCDH11YQ9BZA8 1340 aa29.77■■■□□ 2.36
UBTD1-201ENST00000370664 CACNA1FO60840 1977 aa29.77■■■□□ 2.36
UBTD1-201ENST00000370664 HDAC1Q13547 482 aaPredicted RBP29.76■■■□□ 2.36
UBTD1-201ENST00000370664 SKAP1Q86WV1 359 aa29.76■■■□□ 2.36
UBTD1-201ENST00000370664 MRC1P22897 1456 aa29.75■■■□□ 2.35
UBTD1-201ENST00000370664 FLIIQ13045 1269 aa29.75■■■□□ 2.35
UBTD1-201ENST00000370664 RBM19Q9Y4C8 960 aaKnown RBP29.75■■■□□ 2.35
UBTD1-201ENST00000370664 HEG1Q9ULI3 1381 aa29.75■■■□□ 2.35
UBTD1-201ENST00000370664 EIF2S2P20042 333 aaKnown RBP29.74■■■□□ 2.35
UBTD1-201ENST00000370664 NFATC2IPQ8NCF5 419 aa29.74■■■□□ 2.35
UBTD1-201ENST00000370664 UBAP1LF5GYI3 381 aa29.71■■■□□ 2.35
UBTD1-201ENST00000370664 GIGYF1O75420 1035 aaPredicted RBP29.71■■■□□ 2.35
UBTD1-201ENST00000370664 FKBP5Q13451 457 aaPredicted RBP29.71■■■□□ 2.35
UBTD1-201ENST00000370664 ZNF790Q6PG37 636 aa29.71■■■□□ 2.35
UBTD1-201ENST00000370664 CCT4P50991 539 aaKnown RBP29.69■■■□□ 2.34
UBTD1-201ENST00000370664 CABP4P57796 275 aa29.69■■■□□ 2.34
UBTD1-201ENST00000370664 F6X3S4 739 aa29.68■■■□□ 2.34
UBTD1-201ENST00000370664 NKX1-1Q15270 411 aaPredicted RBP29.68■■■□□ 2.34
UBTD1-201ENST00000370664 USP35Q9P2H5 1018 aa29.68■■■□□ 2.34
UBTD1-201ENST00000370664 SLC39A6Q13433 755 aa29.67■■■□□ 2.34
UBTD1-201ENST00000370664 SLC4A10Q6U841 1118 aa29.67■■■□□ 2.34
UBTD1-201ENST00000370664 CHPF2Q9P2E5 772 aa29.67■■■□□ 2.34
UBTD1-201ENST00000370664 RGS3P49796 1198 aa29.65■■■□□ 2.34
UBTD1-201ENST00000370664 SHANK3Q9BYB0 1731 aa29.65■■■□□ 2.34
UBTD1-201ENST00000370664 C1orf115Q9H7X2 142 aa29.65■■■□□ 2.34
UBTD1-201ENST00000370664 DDX54Q8TDD1 881 aaKnown RBP29.65■■■□□ 2.34
UBTD1-201ENST00000370664 DBF4Q9UBU7 674 aaPredicted RBP29.65■■■□□ 2.34
UBTD1-201ENST00000370664 PDZRN3Q9UPQ7 1066 aa29.65■■■□□ 2.34
UBTD1-201ENST00000370664 ERVV-2B6SEH9 535 aa29.64■■■□□ 2.34
UBTD1-201ENST00000370664 ADAMTS2O95450 1211 aa29.64■■■□□ 2.34
UBTD1-201ENST00000370664 PHAXQ9H814 394 aaKnown RBP29.64■■■□□ 2.34
UBTD1-201ENST00000370664 AEBP2Q6ZN18 517 aaPredicted RBP29.63■■■□□ 2.33
UBTD1-201ENST00000370664 TTC5Q8N0Z6 440 aa29.63■■■□□ 2.33
UBTD1-201ENST00000370664 SMC5Q8IY18 1101 aa29.62■■■□□ 2.33
UBTD1-201ENST00000370664 PLCH1Q4KWH8 1693 aa29.62■■■□□ 2.33
UBTD1-201ENST00000370664 PXDNLA1KZ92 1463 aa29.61■■■□□ 2.33
UBTD1-201ENST00000370664 DISP2A7MBM2 1401 aa29.61■■■□□ 2.33
UBTD1-201ENST00000370664 PRAMEF22A3QJZ6 481 aa29.6■■■□□ 2.33
UBTD1-201ENST00000370664 NUTM2BA6NNL0 878 aaPredicted RBP29.59■■■□□ 2.33
UBTD1-201ENST00000370664 NUTM2EB1AL46 878 aaPredicted RBP29.59■■■□□ 2.33
UBTD1-201ENST00000370664 NUTM2AQ8IVF1 878 aaPredicted RBP29.59■■■□□ 2.33
UBTD1-201ENST00000370664 ZNF496Q96IT1 587 aaPredicted RBP29.59■■■□□ 2.33
UBTD1-201ENST00000370664 MEIS3Q99687 375 aa29.59■■■□□ 2.33
UBTD1-201ENST00000370664 PDE4AP27815 886 aa29.59■■■□□ 2.33
UBTD1-201ENST00000370664 FMNL2Q96PY5 1086 aa29.58■■■□□ 2.33
UBTD1-201ENST00000370664 SIRT2Q8IXJ6 389 aa29.57■■■□□ 2.32
UBTD1-201ENST00000370664 N4BP2Q86UW6 1770 aaPredicted RBP29.57■■■□□ 2.32
UBTD1-201ENST00000370664 ANXA1P04083 346 aa29.56■■■□□ 2.32
UBTD1-201ENST00000370664 SNRPA1P09661 255 aaKnown RBP29.56■■■□□ 2.32
UBTD1-201ENST00000370664 BACH2Q9BYV9 841 aa29.56■■■□□ 2.32
UBTD1-201ENST00000370664 HYPKQ9NX55 129 aa29.56■■■□□ 2.32
UBTD1-201ENST00000370664 NRAPQ86VF7 1730 aa29.56■■■□□ 2.32
UBTD1-201ENST00000370664 C5P01031 1676 aa29.55■■■□□ 2.32
UBTD1-201ENST00000370664 GCC1Q96CN9 775 aa29.55■■■□□ 2.32
UBTD1-201ENST00000370664 DDX21Q9NR30 783 aaKnown RBP eCLIP29.55■■■□□ 2.32
UBTD1-201ENST00000370664 RPAP2Q8IXW5 612 aaPredicted RBP29.54■■■□□ 2.32
UBTD1-201ENST00000370664 ANKRD44Q8N8A2 993 aa29.54■■■□□ 2.32
UBTD1-201ENST00000370664 ATP10DQ9P241 1426 aa29.53■■■□□ 2.32
UBTD1-201ENST00000370664 PROSER3Q2NL68 480 aa29.53■■■□□ 2.32
UBTD1-201ENST00000370664 GNAI3P08754 354 aa29.52■■■□□ 2.32
UBTD1-201ENST00000370664 PI4KAP2A4QPH2 592 aa29.51■■■□□ 2.32
UBTD1-201ENST00000370664 PI4KAP1Q8N8J0 262 aa29.51■■■□□ 2.32
UBTD1-201ENST00000370664 DNAAF4Q8WXU2 420 aa29.51■■■□□ 2.32
UBTD1-201ENST00000370664 NUCB1Q02818 461 aa29.51■■■□□ 2.31
UBTD1-201ENST00000370664 PDIA6Q15084 440 aa29.51■■■□□ 2.31
UBTD1-201ENST00000370664 CEP85Q6P2H3 762 aa29.51■■■□□ 2.31
UBTD1-201ENST00000370664 THRAP3Q9Y2W1 955 aaKnown RBP29.51■■■□□ 2.31
UBTD1-201ENST00000370664 WNK3Q9BYP7 1800 aa29.51■■■□□ 2.31
UBTD1-201ENST00000370664 JCADQ9P266 1359 aa29.51■■■□□ 2.31
UBTD1-201ENST00000370664 SPATA31A1Q5TZJ5 1347 aa29.5■■■□□ 2.31
UBTD1-201ENST00000370664 NWD2Q9ULI1 1742 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms