RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
RPF1-201ENST00000370654 FLAD1Q8NFF5 587 aa18.04■□□□□ 0.48
RPF1-201ENST00000370654 KDRP35968 1356 aa18.04■□□□□ 0.48
RPF1-201ENST00000370654 IL13P35225 146 aa18.03■□□□□ 0.48
RPF1-201ENST00000370654 ZNF530Q6P9A1 599 aaPredicted RBP18.03■□□□□ 0.48
RPF1-201ENST00000370654 KNSTRNQ9Y448 316 aa18.03■□□□□ 0.48
RPF1-201ENST00000370654 GNPATO15228 680 aa18.02■□□□□ 0.47
RPF1-201ENST00000370654 PLEKHO1Q53GL0 409 aaPredicted RBP18.02■□□□□ 0.47
RPF1-201ENST00000370654 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
RPF1-201ENST00000370654 SSFA2P28290 1259 aa18.01■□□□□ 0.47
RPF1-201ENST00000370654 SULT6B1Q6IMI4 303 aa18.01■□□□□ 0.47
RPF1-201ENST00000370654 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
RPF1-201ENST00000370654 DCAF5Q96JK2 942 aa18■□□□□ 0.47
RPF1-201ENST00000370654 RBM42Q9BTD8 480 aaKnown RBP18■□□□□ 0.47
RPF1-201ENST00000370654 CD2APQ9Y5K6 639 aa18■□□□□ 0.47
RPF1-201ENST00000370654 PLEKHG2Q9H7P9 1386 aa18■□□□□ 0.47
RPF1-201ENST00000370654 PER1O15534 1290 aaPredicted RBP17.99■□□□□ 0.47
RPF1-201ENST00000370654 AMOTQ4VCS5 1084 aa17.98■□□□□ 0.47
RPF1-201ENST00000370654 MTHFSP49914 203 aa17.97■□□□□ 0.47
RPF1-201ENST00000370654 CABP4P57796 275 aa17.97■□□□□ 0.47
RPF1-201ENST00000370654 HSP90AB1P08238 724 aaKnown RBP17.96■□□□□ 0.47
RPF1-201ENST00000370654 HMGB2P26583 209 aaKnown RBP17.96■□□□□ 0.47
RPF1-201ENST00000370654 NFATC2IPQ8NCF5 419 aa17.96■□□□□ 0.47
RPF1-201ENST00000370654 COL5A3P25940 1745 aaPredicted RBP17.96■□□□□ 0.47
RPF1-201ENST00000370654 MYH14Q7Z406 1995 aaKnown RBP17.95■□□□□ 0.46
RPF1-201ENST00000370654 CC2D1BQ5T0F9 858 aaKnown RBP17.95■□□□□ 0.46
RPF1-201ENST00000370654 GRIN3BO60391 1043 aa17.94■□□□□ 0.46
RPF1-201ENST00000370654 PTCD1O75127 700 aaKnown RBP17.94■□□□□ 0.46
RPF1-201ENST00000370654 ARHGEF1Q92888 912 aaKnown RBP17.94■□□□□ 0.46
RPF1-201ENST00000370654 LGR6Q9HBX8 967 aa17.94■□□□□ 0.46
RPF1-201ENST00000370654 ZNF831Q5JPB2 1677 aa17.94■□□□□ 0.46
RPF1-201ENST00000370654 MMP10P09238 476 aa17.93■□□□□ 0.46
RPF1-201ENST00000370654 HMOX1P09601 288 aa17.93■□□□□ 0.46
RPF1-201ENST00000370654 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
RPF1-201ENST00000370654 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
RPF1-201ENST00000370654 TRAPPC3LQ5T215 181 aa17.92■□□□□ 0.46
RPF1-201ENST00000370654 RC3H1Q5TC82 1133 aaKnown RBP17.92■□□□□ 0.46
RPF1-201ENST00000370654 RTCBQ9Y3I0 505 aaKnown RBP17.92■□□□□ 0.46
RPF1-201ENST00000370654 CNTNAP4Q9C0A0 1308 aa17.92■□□□□ 0.46
RPF1-201ENST00000370654 RPS6KA4O75676 772 aa17.91■□□□□ 0.46
RPF1-201ENST00000370654 C1QTNF8P60827 252 aa17.91■□□□□ 0.46
RPF1-201ENST00000370654 SCN11AQ9UI33 1791 aa17.91■□□□□ 0.46
RPF1-201ENST00000370654 GYS1P13807 737 aa17.91■□□□□ 0.46
RPF1-201ENST00000370654 TJP1Q07157 1748 aa17.9■□□□□ 0.46
RPF1-201ENST00000370654 KIAA1551Q9HCM1 1747 aa17.9■□□□□ 0.46
RPF1-201ENST00000370654 CICQ96RK0 1608 aaPredicted RBP17.9■□□□□ 0.46
RPF1-201ENST00000370654 CRKLP46109 303 aaKnown RBP17.9■□□□□ 0.46
RPF1-201ENST00000370654 SRP68Q9UHB9 627 aaKnown RBP17.9■□□□□ 0.46
RPF1-201ENST00000370654 C4AP0C0L4 1744 aa17.89■□□□□ 0.45
RPF1-201ENST00000370654 MTHFSDQ2M296 383 aaKnown RBP17.89■□□□□ 0.45
RPF1-201ENST00000370654 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
RPF1-201ENST00000370654 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
RPF1-201ENST00000370654 ATP10DQ9P241 1426 aa17.88■□□□□ 0.45
RPF1-201ENST00000370654 RNMTO43148 476 aaKnown RBP17.88■□□□□ 0.45
RPF1-201ENST00000370654 SLC39A6Q13433 755 aa17.88■□□□□ 0.45
RPF1-201ENST00000370654 INTS5Q6P9B9 1019 aaKnown RBP17.88■□□□□ 0.45
RPF1-201ENST00000370654 N4BP2Q86UW6 1770 aaPredicted RBP17.87■□□□□ 0.45
RPF1-201ENST00000370654 RFC4P35249 363 aa17.87■□□□□ 0.45
RPF1-201ENST00000370654 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
RPF1-201ENST00000370654 SLC52A2Q9HAB3 445 aa17.87■□□□□ 0.45
RPF1-201ENST00000370654 KIF13BQ9NQT8 1826 aa17.87■□□□□ 0.45
RPF1-201ENST00000370654 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
RPF1-201ENST00000370654 A0A0G2JLW4 131 aa17.86■□□□□ 0.45
RPF1-201ENST00000370654 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
RPF1-201ENST00000370654 ADRA2BP18089 450 aa17.86■□□□□ 0.45
RPF1-201ENST00000370654 NLGN1Q8N2Q7 840 aa17.86■□□□□ 0.45
RPF1-201ENST00000370654 ADCY9O60503 1353 aa17.86■□□□□ 0.45
RPF1-201ENST00000370654 ADAMTS7Q9UKP4 1686 aa17.85■□□□□ 0.45
RPF1-201ENST00000370654 MRC1P22897 1456 aa17.85■□□□□ 0.45
RPF1-201ENST00000370654 SENP3-EIF4A1A0A087X0R7 540 aa17.85■□□□□ 0.45
RPF1-201ENST00000370654 GIGYF1O75420 1035 aaPredicted RBP17.85■□□□□ 0.45
RPF1-201ENST00000370654 FKBP8Q14318 412 aa17.85■□□□□ 0.45
RPF1-201ENST00000370654 VIRMAQ69YN4 1812 aaKnown RBP17.85■□□□□ 0.45
RPF1-201ENST00000370654 C10orf71Q711Q0 1435 aa17.85■□□□□ 0.45
RPF1-201ENST00000370654 DPEP1P16444 411 aa17.83■□□□□ 0.45
RPF1-201ENST00000370654 DDR1Q08345 913 aa17.83■□□□□ 0.45
RPF1-201ENST00000370654 ZNF526Q8TF50 670 aaPredicted RBP17.83■□□□□ 0.45
RPF1-201ENST00000370654 KCPQ6ZWJ8 1503 aa17.83■□□□□ 0.45
RPF1-201ENST00000370654 USP42Q9H9J4 1324 aaKnown RBP17.83■□□□□ 0.44
RPF1-201ENST00000370654 NPC1L1Q9UHC9 1359 aa17.82■□□□□ 0.44
RPF1-201ENST00000370654 CYP19A1P11511 503 aaPredicted RBP17.81■□□□□ 0.44
RPF1-201ENST00000370654 KCNA3P22001 575 aa17.81■□□□□ 0.44
RPF1-201ENST00000370654 TGFB2P61812 414 aa17.8■□□□□ 0.44
RPF1-201ENST00000370654 PARP3Q9Y6F1 533 aa17.8■□□□□ 0.44
RPF1-201ENST00000370654 U2SURPO15042 1029 aaKnown RBP17.79■□□□□ 0.44
RPF1-201ENST00000370654 CCDC87Q9NVE4 849 aa17.79■□□□□ 0.44
RPF1-201ENST00000370654 BCS1LQ9Y276 419 aa17.79■□□□□ 0.44
RPF1-201ENST00000370654 SOS1Q07889 1333 aaPredicted RBP17.79■□□□□ 0.44
RPF1-201ENST00000370654 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
RPF1-201ENST00000370654 IL17REQ8NFR9 667 aa17.79■□□□□ 0.44
RPF1-201ENST00000370654 ZBTB1Q9Y2K1 713 aa17.79■□□□□ 0.44
RPF1-201ENST00000370654 TM4SF1P30408 202 aa17.78■□□□□ 0.44
RPF1-201ENST00000370654 GPBP1L1Q9HC44 474 aaPredicted RBP17.78■□□□□ 0.44
RPF1-201ENST00000370654 BRCA1P38398 1863 aaKnown RBP17.78■□□□□ 0.44
RPF1-201ENST00000370654 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.43
RPF1-201ENST00000370654 PHACTR3Q96KR7 559 aa17.77■□□□□ 0.43
RPF1-201ENST00000370654 BCL2L12Q9HB09 334 aa17.77■□□□□ 0.43
RPF1-201ENST00000370654 UBR2Q8IWV8 1755 aa17.76■□□□□ 0.43
RPF1-201ENST00000370654 CHRNA5P30532 468 aa17.76■□□□□ 0.43
RPF1-201ENST00000370654 FCHSD2O94868 740 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms