RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 C5P01031 1676 aa20.2■□□□□ 0.82
LMO4-201ENST00000370542 SLC34A2O95436 690 aa20.2■□□□□ 0.82
LMO4-201ENST00000370542 PHKG2P15735 406 aa20.19■□□□□ 0.82
LMO4-201ENST00000370542 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
LMO4-201ENST00000370542 IFNL2Q8IZJ0 200 aa20.18■□□□□ 0.82
LMO4-201ENST00000370542 TNS4Q8IZW8 715 aa20.18■□□□□ 0.82
LMO4-201ENST00000370542 JMYQ8N9B5 988 aa20.18■□□□□ 0.82
LMO4-201ENST00000370542 TNNT2P45379 298 aaPredicted RBP20.17■□□□□ 0.82
LMO4-201ENST00000370542 FLAD1Q8NFF5 587 aa20.16■□□□□ 0.82
LMO4-201ENST00000370542 CD2APQ9Y5K6 639 aa20.15■□□□□ 0.82
LMO4-201ENST00000370542 C4BP0C0L5 1744 aa20.14■□□□□ 0.81
LMO4-201ENST00000370542 TOMM70O94826 608 aa20.14■□□□□ 0.81
LMO4-201ENST00000370542 AMER1Q5JTC6 1135 aaPredicted RBP20.14■□□□□ 0.81
LMO4-201ENST00000370542 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
LMO4-201ENST00000370542 KIF7Q2M1P5 1343 aa20.12■□□□□ 0.81
LMO4-201ENST00000370542 LOC102724428A0A0B4J2F2 783 aa20.12■□□□□ 0.81
LMO4-201ENST00000370542 SIK1P57059 783 aa20.12■□□□□ 0.81
LMO4-201ENST00000370542 MORC1Q86VD1 984 aa20.12■□□□□ 0.81
LMO4-201ENST00000370542 KLRG1Q96E93 195 aa20.12■□□□□ 0.81
LMO4-201ENST00000370542 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
LMO4-201ENST00000370542 KNSTRNQ9Y448 316 aa20.12■□□□□ 0.81
LMO4-201ENST00000370542 UBR3Q6ZT12 1888 aa20.11■□□□□ 0.81
LMO4-201ENST00000370542 KDRP35968 1356 aa20.11■□□□□ 0.81
LMO4-201ENST00000370542 ERVV-2B6SEH9 535 aa20.11■□□□□ 0.81
LMO4-201ENST00000370542 PER1O15534 1290 aaPredicted RBP20.11■□□□□ 0.81
LMO4-201ENST00000370542 AMIGO3Q86WK7 504 aa20.11■□□□□ 0.81
LMO4-201ENST00000370542 ASAP1Q9ULH1 1129 aa20.11■□□□□ 0.81
LMO4-201ENST00000370542 PCNTO95613 3336 aa20.1■□□□□ 0.81
LMO4-201ENST00000370542 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
LMO4-201ENST00000370542 IL13P35225 146 aa20.09■□□□□ 0.81
LMO4-201ENST00000370542 AMOTQ4VCS5 1084 aa20.09■□□□□ 0.81
LMO4-201ENST00000370542 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
LMO4-201ENST00000370542 LINC00116Q8NCU8 138 aa20.09■□□□□ 0.81
LMO4-201ENST00000370542 DCAF5Q96JK2 942 aa20.09■□□□□ 0.81
LMO4-201ENST00000370542 ZNF831Q5JPB2 1677 aa20.09■□□□□ 0.81
LMO4-201ENST00000370542 HSP90AB1P08238 724 aaKnown RBP20.08■□□□□ 0.81
LMO4-201ENST00000370542 SSFA2P28290 1259 aa20.08■□□□□ 0.81
LMO4-201ENST00000370542 ITPK1Q13572 414 aa20.07■□□□□ 0.8
LMO4-201ENST00000370542 AK7Q96M32 723 aa20.07■□□□□ 0.8
LMO4-201ENST00000370542 KDM6AO15550 1401 aaPredicted RBP20.07■□□□□ 0.8
LMO4-201ENST00000370542 MSH5O43196 834 aa20.06■□□□□ 0.8
LMO4-201ENST00000370542 AEBP1Q8IUX7 1158 aa20.06■□□□□ 0.8
LMO4-201ENST00000370542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.05■□□□□ 0.8
LMO4-201ENST00000370542 SLC4A9Q96Q91 983 aa20.05■□□□□ 0.8
LMO4-201ENST00000370542 ATP6V1AP38606 617 aa20.04■□□□□ 0.8
LMO4-201ENST00000370542 WDR90Q96KV7 1748 aa20.03■□□□□ 0.8
LMO4-201ENST00000370542 HTRA3P83110 453 aa20.03■□□□□ 0.8
LMO4-201ENST00000370542 MSL1Q68DK7 614 aa20.03■□□□□ 0.8
LMO4-201ENST00000370542 SULT6B1Q6IMI4 303 aa20.03■□□□□ 0.8
LMO4-201ENST00000370542 ZNF530Q6P9A1 599 aaPredicted RBP20.03■□□□□ 0.8
LMO4-201ENST00000370542 NPC1L1Q9UHC9 1359 aa20.02■□□□□ 0.8
LMO4-201ENST00000370542 RC3H1Q5TC82 1133 aaKnown RBP20.01■□□□□ 0.79
LMO4-201ENST00000370542 SMIM5Q71RC9 77 aa20.01■□□□□ 0.79
LMO4-201ENST00000370542 MTHFSP49914 203 aa20■□□□□ 0.79
LMO4-201ENST00000370542 RBM46Q8TBY0 533 aaKnown RBP20■□□□□ 0.79
LMO4-201ENST00000370542 WWC3Q9ULE0 1092 aa19.99■□□□□ 0.79
LMO4-201ENST00000370542 COL5A3P25940 1745 aaPredicted RBP19.99■□□□□ 0.79
LMO4-201ENST00000370542 GNPATO15228 680 aa19.98■□□□□ 0.79
LMO4-201ENST00000370542 PHF14O94880 888 aa19.98■□□□□ 0.79
LMO4-201ENST00000370542 CABP4P57796 275 aa19.98■□□□□ 0.79
LMO4-201ENST00000370542 CNTNAP4Q9C0A0 1308 aa19.98■□□□□ 0.79
LMO4-201ENST00000370542 C1orf141Q5JVX7 400 aa19.97■□□□□ 0.79
LMO4-201ENST00000370542 NMRK2Q9NPI5 230 aa19.97■□□□□ 0.79
LMO4-201ENST00000370542 PCDH10Q9P2E7 1040 aa19.97■□□□□ 0.79
LMO4-201ENST00000370542 CICQ96RK0 1608 aaPredicted RBP19.97■□□□□ 0.79
LMO4-201ENST00000370542 SCN11AQ9UI33 1791 aa19.96■□□□□ 0.79
LMO4-201ENST00000370542 MYH14Q7Z406 1995 aaKnown RBP19.96■□□□□ 0.79
LMO4-201ENST00000370542 NEFLP07196 543 aa19.96■□□□□ 0.79
LMO4-201ENST00000370542 ADRA2BP18089 450 aa19.96■□□□□ 0.79
LMO4-201ENST00000370542 AKAP4Q5JQC9 854 aa19.96■□□□□ 0.79
LMO4-201ENST00000370542 NFATC2IPQ8NCF5 419 aa19.96■□□□□ 0.79
LMO4-201ENST00000370542 FSTL1Q12841 308 aa19.95■□□□□ 0.78
LMO4-201ENST00000370542 RTCBQ9Y3I0 505 aaKnown RBP19.95■□□□□ 0.78
LMO4-201ENST00000370542 RPS6KA4O75676 772 aa19.94■□□□□ 0.78
LMO4-201ENST00000370542 TRAPPC3LQ5T215 181 aa19.94■□□□□ 0.78
LMO4-201ENST00000370542 RBM42Q9BTD8 480 aaKnown RBP19.94■□□□□ 0.78
LMO4-201ENST00000370542 ADAMTS7Q9UKP4 1686 aa19.94■□□□□ 0.78
LMO4-201ENST00000370542 COL3A1P02461 1466 aaPredicted RBP19.92■□□□□ 0.78
LMO4-201ENST00000370542 MRC1P22897 1456 aa19.92■□□□□ 0.78
LMO4-201ENST00000370542 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
LMO4-201ENST00000370542 DIAPH1O60610 1272 aaKnown RBP19.92■□□□□ 0.78
LMO4-201ENST00000370542 CC2D1BQ5T0F9 858 aaKnown RBP19.92■□□□□ 0.78
LMO4-201ENST00000370542 ARHGEF1Q92888 912 aaKnown RBP19.92■□□□□ 0.78
LMO4-201ENST00000370542 KIF13BQ9NQT8 1826 aa19.91■□□□□ 0.78
LMO4-201ENST00000370542 NLGN1Q8N2Q7 840 aa19.91■□□□□ 0.78
LMO4-201ENST00000370542 SLC52A2Q9HAB3 445 aa19.91■□□□□ 0.78
LMO4-201ENST00000370542 LGR6Q9HBX8 967 aa19.9■□□□□ 0.78
LMO4-201ENST00000370542 MMP10P09238 476 aa19.89■□□□□ 0.77
LMO4-201ENST00000370542 HMOX1P09601 288 aa19.89■□□□□ 0.77
LMO4-201ENST00000370542 GYS1P13807 737 aa19.89■□□□□ 0.77
LMO4-201ENST00000370542 TJP1Q07157 1748 aa19.89■□□□□ 0.77
LMO4-201ENST00000370542 MTHFSDQ2M296 383 aaKnown RBP19.89■□□□□ 0.77
LMO4-201ENST00000370542 RNMTO43148 476 aaKnown RBP19.88■□□□□ 0.77
LMO4-201ENST00000370542 PTCD1O75127 700 aaKnown RBP19.88■□□□□ 0.77
LMO4-201ENST00000370542 HSPA1AP0DMV8 641 aaKnown RBP19.88■□□□□ 0.77
LMO4-201ENST00000370542 HSPA1BP0DMV9 641 aaKnown RBP19.88■□□□□ 0.77
LMO4-201ENST00000370542 CRKLP46109 303 aaKnown RBP19.87■□□□□ 0.77
LMO4-201ENST00000370542 C4AP0C0L4 1744 aa19.87■□□□□ 0.77
LMO4-201ENST00000370542 KIAA1551Q9HCM1 1747 aa19.87■□□□□ 0.77
LMO4-201ENST00000370542 VIRMAQ69YN4 1812 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms