RNA–Protein interactions for RNA: ENST00000369049.8

ECM1-203, Transcript of extracellular matrix protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECM1, Length 1,925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-203ENST00000369049 CABP4P57796 275 aa16.76■□□□□ 0.27
ECM1-203ENST00000369049 SSFA2P28290 1259 aa16.75■□□□□ 0.27
ECM1-203ENST00000369049 ATP6V1AP38606 617 aa16.75■□□□□ 0.27
ECM1-203ENST00000369049 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
ECM1-203ENST00000369049 ATG3Q9NT62 314 aa16.75■□□□□ 0.27
ECM1-203ENST00000369049 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
ECM1-203ENST00000369049 DIAPH1O60610 1272 aaKnown RBP16.74■□□□□ 0.27
ECM1-203ENST00000369049 AEBP1Q8IUX7 1158 aa16.74■□□□□ 0.27
ECM1-203ENST00000369049 AKAP4Q5JQC9 854 aa16.72■□□□□ 0.27
ECM1-203ENST00000369049 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
ECM1-203ENST00000369049 KDM6AO15550 1401 aaPredicted RBP16.71■□□□□ 0.27
ECM1-203ENST00000369049 KLHL34Q8N239 644 aa16.71■□□□□ 0.27
ECM1-203ENST00000369049 LINC00116Q8NCU8 138 aa16.71■□□□□ 0.27
ECM1-203ENST00000369049 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.27
ECM1-203ENST00000369049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.7■□□□□ 0.26
ECM1-203ENST00000369049 RC3H1Q5TC82 1133 aaKnown RBP16.7■□□□□ 0.26
ECM1-203ENST00000369049 CFAP53Q96M91 514 aa16.7■□□□□ 0.26
ECM1-203ENST00000369049 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
ECM1-203ENST00000369049 GNPATO15228 680 aa16.69■□□□□ 0.26
ECM1-203ENST00000369049 ITPK1Q13572 414 aa16.69■□□□□ 0.26
ECM1-203ENST00000369049 GPR162Q16538 588 aa16.69■□□□□ 0.26
ECM1-203ENST00000369049 CD2APQ9Y5K6 639 aa16.69■□□□□ 0.26
ECM1-203ENST00000369049 PHF14O94880 888 aa16.68■□□□□ 0.26
ECM1-203ENST00000369049 ADRA2BP18089 450 aa16.68■□□□□ 0.26
ECM1-203ENST00000369049 RTCBQ9Y3I0 505 aaKnown RBP16.68■□□□□ 0.26
ECM1-203ENST00000369049 UBR3Q6ZT12 1888 aa16.68■□□□□ 0.26
ECM1-203ENST00000369049 MSL1Q68DK7 614 aa16.68■□□□□ 0.26
ECM1-203ENST00000369049 CNTNAP4Q9C0A0 1308 aa16.67■□□□□ 0.26
ECM1-203ENST00000369049 HMOX1P09601 288 aa16.67■□□□□ 0.26
ECM1-203ENST00000369049 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
ECM1-203ENST00000369049 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
ECM1-203ENST00000369049 GRIN3BO60391 1043 aa16.65■□□□□ 0.26
ECM1-203ENST00000369049 SLC52A2Q9HAB3 445 aa16.65■□□□□ 0.26
ECM1-203ENST00000369049 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
ECM1-203ENST00000369049 SCN11AQ9UI33 1791 aa16.65■□□□□ 0.26
ECM1-203ENST00000369049 ZNF316A6NFI3 1004 aaPredicted RBP16.64■□□□□ 0.26
ECM1-203ENST00000369049 U2SURPO15042 1029 aaKnown RBP16.64■□□□□ 0.26
ECM1-203ENST00000369049 GAS2L2Q8NHY3 880 aa16.64■□□□□ 0.26
ECM1-203ENST00000369049 RNMTO43148 476 aaKnown RBP16.64■□□□□ 0.25
ECM1-203ENST00000369049 RPS6KA4O75676 772 aa16.64■□□□□ 0.25
ECM1-203ENST00000369049 NLGN1Q8N2Q7 840 aa16.64■□□□□ 0.25
ECM1-203ENST00000369049 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
ECM1-203ENST00000369049 MRC1P22897 1456 aa16.63■□□□□ 0.25
ECM1-203ENST00000369049 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
ECM1-203ENST00000369049 MTHFSDQ2M296 383 aaKnown RBP16.62■□□□□ 0.25
ECM1-203ENST00000369049 SLC4A9Q96Q91 983 aa16.62■□□□□ 0.25
ECM1-203ENST00000369049 COL5A3P25940 1745 aaPredicted RBP16.62■□□□□ 0.25
ECM1-203ENST00000369049 RFC4P35249 363 aa16.62■□□□□ 0.25
ECM1-203ENST00000369049 CNGB1Q14028 1251 aaPredicted RBP16.62■□□□□ 0.25
ECM1-203ENST00000369049 AMIGO3Q86WK7 504 aa16.62■□□□□ 0.25
ECM1-203ENST00000369049 NLGN2Q8NFZ4 835 aa16.62■□□□□ 0.25
ECM1-203ENST00000369049 CICQ96RK0 1608 aaPredicted RBP16.61■□□□□ 0.25
ECM1-203ENST00000369049 CHD4Q14839 1912 aa16.6■□□□□ 0.25
ECM1-203ENST00000369049 LGR6Q9HBX8 967 aa16.6■□□□□ 0.25
ECM1-203ENST00000369049 ADAMTS7Q9UKP4 1686 aa16.59■□□□□ 0.25
ECM1-203ENST00000369049 GNAT3A8MTJ3 354 aa16.59■□□□□ 0.25
ECM1-203ENST00000369049 VSIG10Q8N0Z9 540 aa16.59■□□□□ 0.25
ECM1-203ENST00000369049 ARHGEF1Q92888 912 aaKnown RBP16.59■□□□□ 0.25
ECM1-203ENST00000369049 CRKLP46109 303 aaKnown RBP16.58■□□□□ 0.25
ECM1-203ENST00000369049 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
ECM1-203ENST00000369049 MMP10P09238 476 aa16.57■□□□□ 0.24
ECM1-203ENST00000369049 TEFQ10587 303 aa16.57■□□□□ 0.24
ECM1-203ENST00000369049 SMIM5Q71RC9 77 aa16.57■□□□□ 0.24
ECM1-203ENST00000369049 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
ECM1-203ENST00000369049 CCDC87Q9NVE4 849 aa16.56■□□□□ 0.24
ECM1-203ENST00000369049 PARP3Q9Y6F1 533 aa16.56■□□□□ 0.24
ECM1-203ENST00000369049 FCHSD2O94868 740 aa16.55■□□□□ 0.24
ECM1-203ENST00000369049 GYS1P13807 737 aa16.55■□□□□ 0.24
ECM1-203ENST00000369049 TJP1Q07157 1748 aa16.55■□□□□ 0.24
ECM1-203ENST00000369049 TEX13AQ9BXU3 409 aaPredicted RBP16.55■□□□□ 0.24
ECM1-203ENST00000369049 TGFB2P61812 414 aa16.55■□□□□ 0.24
ECM1-203ENST00000369049 ZNF784Q8NCA9 323 aaPredicted RBP16.55■□□□□ 0.24
ECM1-203ENST00000369049 RSPH6AQ9H0K4 717 aa16.55■□□□□ 0.24
ECM1-203ENST00000369049 U2AF1L5P0DN76 240 aaPredicted RBP16.54■□□□□ 0.24
ECM1-203ENST00000369049 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
ECM1-203ENST00000369049 U2AF1Q01081 240 aaKnown RBP eCLIP16.54■□□□□ 0.24
ECM1-203ENST00000369049 INTS5Q6P9B9 1019 aaKnown RBP16.54■□□□□ 0.24
ECM1-203ENST00000369049 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
ECM1-203ENST00000369049 VIRMAQ69YN4 1812 aaKnown RBP16.53■□□□□ 0.24
ECM1-203ENST00000369049 USP42Q9H9J4 1324 aaKnown RBP16.53■□□□□ 0.24
ECM1-203ENST00000369049 ZPR1O75312 459 aa16.53■□□□□ 0.24
ECM1-203ENST00000369049 STARD3NLO95772 234 aa16.53■□□□□ 0.24
ECM1-203ENST00000369049 NEFMP07197 916 aa16.53■□□□□ 0.24
ECM1-203ENST00000369049 YBX3P16989 372 aaKnown RBP eCLIP16.53■□□□□ 0.24
ECM1-203ENST00000369049 SLC39A6Q13433 755 aa16.53■□□□□ 0.24
ECM1-203ENST00000369049 CYP19A1P11511 503 aaPredicted RBP16.53■□□□□ 0.24
ECM1-203ENST00000369049 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
ECM1-203ENST00000369049 KCPQ6ZWJ8 1503 aa16.52■□□□□ 0.24
ECM1-203ENST00000369049 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.23
ECM1-203ENST00000369049 SOS1Q07889 1333 aaPredicted RBP16.51■□□□□ 0.23
ECM1-203ENST00000369049 HTATSF1O43719 755 aaKnown RBP16.51■□□□□ 0.23
ECM1-203ENST00000369049 IL17REQ8NFR9 667 aa16.51■□□□□ 0.23
ECM1-203ENST00000369049 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
ECM1-203ENST00000369049 C4AP0C0L4 1744 aa16.51■□□□□ 0.23
ECM1-203ENST00000369049 A0A087WZG4 1122 aa16.51■□□□□ 0.23
ECM1-203ENST00000369049 ZNF790Q6PG37 636 aa16.51■□□□□ 0.23
ECM1-203ENST00000369049 C10orf71Q711Q0 1435 aa16.5■□□□□ 0.23
ECM1-203ENST00000369049 CEMIPQ8WUJ3 1361 aa16.5■□□□□ 0.23
ECM1-203ENST00000369049 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
ECM1-203ENST00000369049 KIF13BQ9NQT8 1826 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms