RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 PRDM11Q9NQV5 511 aa16.47■□□□□ 0.23
ECM1-202ENST00000369047 TSPYL4Q9UJ04 414 aa16.47■□□□□ 0.23
ECM1-202ENST00000369047 SIRT2Q8IXJ6 389 aa16.47■□□□□ 0.23
ECM1-202ENST00000369047 NFAT5O94916 1531 aa16.46■□□□□ 0.23
ECM1-202ENST00000369047 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.22
ECM1-202ENST00000369047 RGS12O14924 1447 aa16.45■□□□□ 0.22
ECM1-202ENST00000369047 PLCH1Q4KWH8 1693 aa16.45■□□□□ 0.22
ECM1-202ENST00000369047 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.45■□□□□ 0.22
ECM1-202ENST00000369047 SLC4A2P04920 1241 aa16.45■□□□□ 0.22
ECM1-202ENST00000369047 IP6K1Q92551 441 aa16.45■□□□□ 0.22
ECM1-202ENST00000369047 C22orf23Q9BZE7 217 aa16.45■□□□□ 0.22
ECM1-202ENST00000369047 DCTPP1Q9H773 170 aa16.45■□□□□ 0.22
ECM1-202ENST00000369047 KRT24Q2M2I5 525 aa16.44■□□□□ 0.22
ECM1-202ENST00000369047 FNBP4Q8N3X1 1017 aaPredicted RBP16.44■□□□□ 0.22
ECM1-202ENST00000369047 C1orf115Q9H7X2 142 aa16.44■□□□□ 0.22
ECM1-202ENST00000369047 LRRC37A3O60309 1634 aa16.44■□□□□ 0.22
ECM1-202ENST00000369047 SLIT2O94813 1529 aa16.44■□□□□ 0.22
ECM1-202ENST00000369047 AFF2P51816 1311 aa16.44■□□□□ 0.22
ECM1-202ENST00000369047 ZC3H6P61129 1189 aaKnown RBP16.44■□□□□ 0.22
ECM1-202ENST00000369047 NFKBIBQ15653 356 aa16.44■□□□□ 0.22
ECM1-202ENST00000369047 ANKRD44Q8N8A2 993 aa16.44■□□□□ 0.22
ECM1-202ENST00000369047 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
ECM1-202ENST00000369047 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
ECM1-202ENST00000369047 ARHGEF25Q86VW2 580 aa16.42■□□□□ 0.22
ECM1-202ENST00000369047 STK31Q9BXU1 1019 aa16.42■□□□□ 0.22
ECM1-202ENST00000369047 USP21Q9UK80 565 aa16.42■□□□□ 0.22
ECM1-202ENST00000369047 LTN1O94822 1766 aa16.41■□□□□ 0.22
ECM1-202ENST00000369047 MFAP1P55081 439 aaKnown RBP16.41■□□□□ 0.22
ECM1-202ENST00000369047 TAF7Q15545 349 aaPredicted RBP16.41■□□□□ 0.22
ECM1-202ENST00000369047 CCDC30Q5VVM6 783 aa16.41■□□□□ 0.22
ECM1-202ENST00000369047 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
ECM1-202ENST00000369047 CACNA1FO60840 1977 aa16.41■□□□□ 0.22
ECM1-202ENST00000369047 LMO7Q8WWI1 1683 aa16.41■□□□□ 0.22
ECM1-202ENST00000369047 ZBTB7CA1YPR0 619 aa16.4■□□□□ 0.22
ECM1-202ENST00000369047 UNC5CLQ8IV45 518 aa16.4■□□□□ 0.22
ECM1-202ENST00000369047 CHMP4AQ9BY43 222 aa16.4■□□□□ 0.22
ECM1-202ENST00000369047 TRPC5Q9UL62 973 aaPredicted RBP16.4■□□□□ 0.22
ECM1-202ENST00000369047 NRAPQ86VF7 1730 aa16.4■□□□□ 0.22
ECM1-202ENST00000369047 RBM25P49756 843 aaKnown RBP16.39■□□□□ 0.21
ECM1-202ENST00000369047 IL17REQ8NFR9 667 aa16.39■□□□□ 0.21
ECM1-202ENST00000369047 TBC1D2Q9BYX2 928 aa16.39■□□□□ 0.21
ECM1-202ENST00000369047 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
ECM1-202ENST00000369047 ATP10DQ9P241 1426 aa16.38■□□□□ 0.21
ECM1-202ENST00000369047 HMMRO75330 724 aa16.38■□□□□ 0.21
ECM1-202ENST00000369047 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
ECM1-202ENST00000369047 COL18A1P39060 1754 aa16.38■□□□□ 0.21
ECM1-202ENST00000369047 CHRNA2Q15822 529 aa16.38■□□□□ 0.21
ECM1-202ENST00000369047 LTV1Q96GA3 475 aaPredicted RBP16.38■□□□□ 0.21
ECM1-202ENST00000369047 BCL9LQ86UU0 1499 aa16.37■□□□□ 0.21
ECM1-202ENST00000369047 EVA1CP58658 441 aa16.37■□□□□ 0.21
ECM1-202ENST00000369047 ATRNO75882 1429 aa16.37■□□□□ 0.21
ECM1-202ENST00000369047 VPS72Q15906 364 aa16.36■□□□□ 0.21
ECM1-202ENST00000369047 CEMIPQ8WUJ3 1361 aa16.35■□□□□ 0.21
ECM1-202ENST00000369047 CAMTA1Q9Y6Y1 1673 aa16.35■□□□□ 0.21
ECM1-202ENST00000369047 PLEKHM2Q8IWE5 1019 aa16.35■□□□□ 0.21
ECM1-202ENST00000369047 COL5A2P05997 1499 aaPredicted RBP16.35■□□□□ 0.21
ECM1-202ENST00000369047 FAM208AQ9UK61 1670 aaKnown RBP16.35■□□□□ 0.21
ECM1-202ENST00000369047 G2E3Q7L622 706 aa16.34■□□□□ 0.21
ECM1-202ENST00000369047 MEIS3Q99687 375 aa16.34■□□□□ 0.21
ECM1-202ENST00000369047 ANTXR1Q9H6X2 564 aa16.34■□□□□ 0.21
ECM1-202ENST00000369047 QTRT2Q9H974 415 aaKnown RBP16.34■□□□□ 0.21
ECM1-202ENST00000369047 FLIIQ13045 1269 aa16.34■□□□□ 0.21
ECM1-202ENST00000369047 NBPF6Q5VWK0 638 aa16.34■□□□□ 0.21
ECM1-202ENST00000369047 NBPF4Q96M43 638 aa16.34■□□□□ 0.21
ECM1-202ENST00000369047 CDC45O75419 566 aa16.33■□□□□ 0.21
ECM1-202ENST00000369047 GNAI3P08754 354 aa16.33■□□□□ 0.21
ECM1-202ENST00000369047 HOXB7P09629 217 aa16.33■□□□□ 0.21
ECM1-202ENST00000369047 AMOTQ4VCS5 1084 aa16.33■□□□□ 0.21
ECM1-202ENST00000369047 GNAI2P04899 355 aa16.33■□□□□ 0.2
ECM1-202ENST00000369047 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.2
ECM1-202ENST00000369047 SLC4A10Q6U841 1118 aa16.33■□□□□ 0.2
ECM1-202ENST00000369047 SNX21Q969T3 373 aa16.33■□□□□ 0.2
ECM1-202ENST00000369047 CSB-PGBD3P0DP91 1061 aa16.32■□□□□ 0.2
ECM1-202ENST00000369047 PLEKHO1Q53GL0 409 aaPredicted RBP16.32■□□□□ 0.2
ECM1-202ENST00000369047 TBC1D9Q6ZT07 1266 aa16.32■□□□□ 0.2
ECM1-202ENST00000369047 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
ECM1-202ENST00000369047 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
ECM1-202ENST00000369047 CCDC9Q9Y3X0 531 aaKnown RBP16.32■□□□□ 0.2
ECM1-202ENST00000369047 WDR17Q8IZU2 1322 aa16.32■□□□□ 0.2
ECM1-202ENST00000369047 RXRBP28702 533 aa16.31■□□□□ 0.2
ECM1-202ENST00000369047 FKBP5Q13451 457 aaPredicted RBP16.31■□□□□ 0.2
ECM1-202ENST00000369047 AKAP4Q5JQC9 854 aa16.31■□□□□ 0.2
ECM1-202ENST00000369047 TTC22Q5TAA0 569 aa16.31■□□□□ 0.2
ECM1-202ENST00000369047 PXDNLA1KZ92 1463 aa16.31■□□□□ 0.2
ECM1-202ENST00000369047 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
ECM1-202ENST00000369047 HSCBQ8IWL3 235 aa16.31■□□□□ 0.2
ECM1-202ENST00000369047 USHBP1Q8N6Y0 703 aa16.31■□□□□ 0.2
ECM1-202ENST00000369047 F6X3S4 739 aa16.3■□□□□ 0.2
ECM1-202ENST00000369047 FRAT2O75474 233 aaPredicted RBP16.3■□□□□ 0.2
ECM1-202ENST00000369047 GJD4Q96KN9 370 aaPredicted RBP16.3■□□□□ 0.2
ECM1-202ENST00000369047 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
ECM1-202ENST00000369047 NCAPD2Q15021 1401 aa16.3■□□□□ 0.2
ECM1-202ENST00000369047 ERBB3P21860 1342 aa16.3■□□□□ 0.2
ECM1-202ENST00000369047 GSE1Q14687 1217 aa16.3■□□□□ 0.2
ECM1-202ENST00000369047 N4BP2Q86UW6 1770 aaPredicted RBP16.3■□□□□ 0.2
ECM1-202ENST00000369047 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
ECM1-202ENST00000369047 SLKQ9H2G2 1235 aaPredicted RBP16.3■□□□□ 0.2
ECM1-202ENST00000369047 SPATA31A5Q5VU36 1347 aa16.29■□□□□ 0.2
ECM1-202ENST00000369047 SPATA31A7Q8IWB4 1347 aa16.29■□□□□ 0.2
ECM1-202ENST00000369047 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms