RNA–Protein interactions for RNA: ENST00000368881.8

PSMD4-201, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5 BASIC

Gene PSMD4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-201ENST00000368881 NOB1Q9ULX3 412 aaKnown RBP22.65■■□□□ 1.22
PSMD4-201ENST00000368881 BTBD11A6QL63 1104 aa22.64■■□□□ 1.22
PSMD4-201ENST00000368881 ELL2O00472 640 aaPredicted RBP22.64■■□□□ 1.22
PSMD4-201ENST00000368881 CDCA7Q9BWT1 371 aaPredicted RBP22.64■■□□□ 1.22
PSMD4-201ENST00000368881 PTPRCP08575 1304 aa22.64■■□□□ 1.21
PSMD4-201ENST00000368881 TRIM27P14373 513 aa22.63■■□□□ 1.21
PSMD4-201ENST00000368881 MVPQ14764 893 aaKnown RBP22.63■■□□□ 1.21
PSMD4-201ENST00000368881 CCDC30Q5VVM6 783 aa22.63■■□□□ 1.21
PSMD4-201ENST00000368881 SPATA31A6Q5VVP1 1343 aa22.63■■□□□ 1.21
PSMD4-201ENST00000368881 WNK3Q9BYP7 1800 aa22.63■■□□□ 1.21
PSMD4-201ENST00000368881 KDM6AO15550 1401 aaPredicted RBP22.63■■□□□ 1.21
PSMD4-201ENST00000368881 STK31Q9BXU1 1019 aa22.62■■□□□ 1.21
PSMD4-201ENST00000368881 DDX19BQ9UMR2 479 aa22.62■■□□□ 1.21
PSMD4-201ENST00000368881 THRAP3Q9Y2W1 955 aaKnown RBP22.62■■□□□ 1.21
PSMD4-201ENST00000368881 SLC52A2Q9HAB3 445 aa22.61■■□□□ 1.21
PSMD4-201ENST00000368881 MIS18AQ9NYP9 233 aa22.61■■□□□ 1.21
PSMD4-201ENST00000368881 PANK1Q8TE04 598 aa22.6■■□□□ 1.21
PSMD4-201ENST00000368881 COG6Q9Y2V7 657 aa22.6■■□□□ 1.21
PSMD4-201ENST00000368881 DISP2A7MBM2 1401 aa22.6■■□□□ 1.21
PSMD4-201ENST00000368881 SHANK3Q9BYB0 1731 aa22.6■■□□□ 1.21
PSMD4-201ENST00000368881 CYP27B1O15528 508 aa22.59■■□□□ 1.21
PSMD4-201ENST00000368881 EIF4A1P60842 406 aaKnown RBP22.59■■□□□ 1.21
PSMD4-201ENST00000368881 NKX1-1Q15270 411 aaPredicted RBP22.59■■□□□ 1.21
PSMD4-201ENST00000368881 SLIT2O94813 1529 aa22.59■■□□□ 1.21
PSMD4-201ENST00000368881 CLUAP1Q96AJ1 413 aa22.58■■□□□ 1.21
PSMD4-201ENST00000368881 ERVV-2B6SEH9 535 aa22.57■■□□□ 1.2
PSMD4-201ENST00000368881 ABCC4O15439 1325 aa22.57■■□□□ 1.2
PSMD4-201ENST00000368881 ADAMTS2O95450 1211 aa22.57■■□□□ 1.2
PSMD4-201ENST00000368881 KRT24Q2M2I5 525 aa22.57■■□□□ 1.2
PSMD4-201ENST00000368881 RLBP1P12271 317 aa22.56■■□□□ 1.2
PSMD4-201ENST00000368881 HEG1Q9ULI3 1381 aa22.55■■□□□ 1.2
PSMD4-201ENST00000368881 NUTM2BA6NNL0 878 aaPredicted RBP22.55■■□□□ 1.2
PSMD4-201ENST00000368881 NUTM2EB1AL46 878 aaPredicted RBP22.55■■□□□ 1.2
PSMD4-201ENST00000368881 CABP4P57796 275 aa22.55■■□□□ 1.2
PSMD4-201ENST00000368881 CENPQQ7L2Z9 268 aaPredicted RBP22.55■■□□□ 1.2
PSMD4-201ENST00000368881 NUTM2AQ8IVF1 878 aaPredicted RBP22.55■■□□□ 1.2
PSMD4-201ENST00000368881 ITPRIPQ8IWB1 547 aa22.55■■□□□ 1.2
PSMD4-201ENST00000368881 LRP6O75581 1613 aa22.54■■□□□ 1.2
PSMD4-201ENST00000368881 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
PSMD4-201ENST00000368881 SLC4A2P04920 1241 aa22.53■■□□□ 1.2
PSMD4-201ENST00000368881 ZNF790Q6PG37 636 aa22.53■■□□□ 1.2
PSMD4-201ENST00000368881 TNS2Q63HR2 1409 aa22.52■■□□□ 1.2
PSMD4-201ENST00000368881 SPATA31A1Q5TZJ5 1347 aa22.52■■□□□ 1.2
PSMD4-201ENST00000368881 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.52■■□□□ 1.2
PSMD4-201ENST00000368881 TTC5Q8N0Z6 440 aa22.52■■□□□ 1.2
PSMD4-201ENST00000368881 TMEM57Q8N5G2 664 aa22.52■■□□□ 1.2
PSMD4-201ENST00000368881 BARGINQ6ZT62 677 aa22.5■■□□□ 1.19
PSMD4-201ENST00000368881 NFATC2IPQ8NCF5 419 aa22.5■■□□□ 1.19
PSMD4-201ENST00000368881 USP35Q9P2H5 1018 aa22.5■■□□□ 1.19
PSMD4-201ENST00000368881 TNNQ9UQP3 1299 aa22.5■■□□□ 1.19
PSMD4-201ENST00000368881 PXDNLA1KZ92 1463 aa22.49■■□□□ 1.19
PSMD4-201ENST00000368881 SPATA31A5Q5VU36 1347 aa22.49■■□□□ 1.19
PSMD4-201ENST00000368881 SPATA31A7Q8IWB4 1347 aa22.49■■□□□ 1.19
PSMD4-201ENST00000368881 EXOC5O00471 708 aa22.49■■□□□ 1.19
PSMD4-201ENST00000368881 UNC5CLQ8IV45 518 aa22.49■■□□□ 1.19
PSMD4-201ENST00000368881 PAPPAQ13219 1627 aa22.48■■□□□ 1.19
PSMD4-201ENST00000368881 TCERG1O14776 1098 aaKnown RBP22.48■■□□□ 1.19
PSMD4-201ENST00000368881 GIGYF1O75420 1035 aaPredicted RBP22.48■■□□□ 1.19
PSMD4-201ENST00000368881 INTS3Q68E01 1043 aaKnown RBP22.48■■□□□ 1.19
PSMD4-201ENST00000368881 FMNL2Q96PY5 1086 aa22.48■■□□□ 1.19
PSMD4-201ENST00000368881 KDM2BQ8NHM5 1336 aa22.47■■□□□ 1.19
PSMD4-201ENST00000368881 N4BP2Q86UW6 1770 aaPredicted RBP22.47■■□□□ 1.19
PSMD4-201ENST00000368881 DDX54Q8TDD1 881 aaKnown RBP22.47■■□□□ 1.19
PSMD4-201ENST00000368881 DBF4Q9UBU7 674 aaPredicted RBP22.47■■□□□ 1.19
PSMD4-201ENST00000368881 RGS12O14924 1447 aa22.46■■□□□ 1.19
PSMD4-201ENST00000368881 CCT4P50991 539 aaKnown RBP22.46■■□□□ 1.19
PSMD4-201ENST00000368881 FLIIQ13045 1269 aa22.46■■□□□ 1.19
PSMD4-201ENST00000368881 FNBP4Q8N3X1 1017 aaPredicted RBP22.46■■□□□ 1.19
PSMD4-201ENST00000368881 LAMB4A4D0S4 1761 aa22.46■■□□□ 1.19
PSMD4-201ENST00000368881 UBR2Q8IWV8 1755 aa22.46■■□□□ 1.19
PSMD4-201ENST00000368881 KCNQ3O43525 872 aa22.45■■□□□ 1.18
PSMD4-201ENST00000368881 VPS72Q15906 364 aa22.45■■□□□ 1.18
PSMD4-201ENST00000368881 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
PSMD4-201ENST00000368881 RWDD1Q9H446 243 aaPredicted RBP22.45■■□□□ 1.18
PSMD4-201ENST00000368881 SNRPA1P09661 255 aaKnown RBP22.44■■□□□ 1.18
PSMD4-201ENST00000368881 ZBTB40Q9NUA8 1239 aa22.44■■□□□ 1.18
PSMD4-201ENST00000368881 TOGARAM1Q9Y4F4 1720 aa22.43■■□□□ 1.18
PSMD4-201ENST00000368881 EIF2S2P20042 333 aaKnown RBP22.42■■□□□ 1.18
PSMD4-201ENST00000368881 FKBP5Q13451 457 aaPredicted RBP22.42■■□□□ 1.18
PSMD4-201ENST00000368881 DDB1Q16531 1140 aa22.42■■□□□ 1.18
PSMD4-201ENST00000368881 HYPKQ9NX55 129 aa22.42■■□□□ 1.18
PSMD4-201ENST00000368881 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
PSMD4-201ENST00000368881 ERBB4Q15303 1308 aa22.42■■□□□ 1.18
PSMD4-201ENST00000368881 ZBTB7BO15156 539 aaPredicted RBP22.41■■□□□ 1.18
PSMD4-201ENST00000368881 C8orf37Q96NL8 207 aa22.41■■□□□ 1.18
PSMD4-201ENST00000368881 CCDC9Q9Y3X0 531 aaKnown RBP22.41■■□□□ 1.18
PSMD4-201ENST00000368881 BCL9LQ86UU0 1499 aa22.41■■□□□ 1.18
PSMD4-201ENST00000368881 HSPA1LP34931 641 aa22.4■■□□□ 1.18
PSMD4-201ENST00000368881 DDX21Q9NR30 783 aaKnown RBP eCLIP22.4■■□□□ 1.18
PSMD4-201ENST00000368881 C5P01031 1676 aa22.4■■□□□ 1.18
PSMD4-201ENST00000368881 SLC39A6Q13433 755 aa22.39■■□□□ 1.18
PSMD4-201ENST00000368881 HDAC1Q13547 482 aaPredicted RBP22.39■■□□□ 1.18
PSMD4-201ENST00000368881 CHPF2Q9P2E5 772 aa22.39■■□□□ 1.18
PSMD4-201ENST00000368881 ITGB4P16144 1822 aa22.39■■□□□ 1.17
PSMD4-201ENST00000368881 MEX3CQ5U5Q3 659 aaKnown RBP22.38■■□□□ 1.17
PSMD4-201ENST00000368881 G2E3Q7L622 706 aa22.38■■□□□ 1.17
PSMD4-201ENST00000368881 ZNF496Q96IT1 587 aaPredicted RBP22.38■■□□□ 1.17
PSMD4-201ENST00000368881 DDX58O95786 925 aaKnown RBP22.37■■□□□ 1.17
PSMD4-201ENST00000368881 NECTIN2Q92692 538 aa22.37■■□□□ 1.17
PSMD4-201ENST00000368881 KCPQ6ZWJ8 1503 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms