RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 HSPA8P11142 646 aaKnown RBP15.14■□□□□ 0.01
TUBE1-201ENST00000368657 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
TUBE1-201ENST00000368657 ARFGEF1Q9Y6D6 1849 aa15.13■□□□□ 0.01
TUBE1-201ENST00000368657 C4BP0C0L5 1744 aa15.13■□□□□ 0.01
TUBE1-201ENST00000368657 VEGFBP49765 207 aa15.13■□□□□ 0.01
TUBE1-201ENST00000368657 PALLDQ8WX93 1383 aa15.12■□□□□ 0.01
TUBE1-201ENST00000368657 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
TUBE1-201ENST00000368657 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
TUBE1-201ENST00000368657 TMF1P82094 1093 aa15.11■□□□□ 0.01
TUBE1-201ENST00000368657 SBF1O95248 1867 aa15.11■□□□□ 0.01
TUBE1-201ENST00000368657 UBR3Q6ZT12 1888 aa15.11■□□□□ 0.01
TUBE1-201ENST00000368657 TNRC18O15417 2968 aaPredicted RBP15.1■□□□□ 0.01
TUBE1-201ENST00000368657 DPY19L2Q6NUT2 758 aa15.1■□□□□ 0.01
TUBE1-201ENST00000368657 BRCA1P38398 1863 aaKnown RBP15.1■□□□□ 0.01
TUBE1-201ENST00000368657 POTECB2RU33 542 aa15.09■□□□□ 0.01
TUBE1-201ENST00000368657 CFAP44Q96MT7 982 aa15.09■□□□□ 0.01
TUBE1-201ENST00000368657 LMNB1P20700 586 aa15.08■□□□□ 0
TUBE1-201ENST00000368657 PARP3Q9Y6F1 533 aa15.08■□□□□ 0
TUBE1-201ENST00000368657 TOGARAM1Q9Y4F4 1720 aa15.08■□□□□ 0
TUBE1-201ENST00000368657 MPRIPQ6WCQ1 1025 aa15.07■□□□□ 0
TUBE1-201ENST00000368657 CENPJQ9HC77 1338 aaPredicted RBP15.07■□□□□ 0
TUBE1-201ENST00000368657 USP31Q70CQ4 1352 aa15.07■□□□□ 0
TUBE1-201ENST00000368657 PDE4DIPQ5VU43 2346 aa15.06■□□□□ 0
TUBE1-201ENST00000368657 TMEM88BA6NKF7 163 aa15.06■□□□□ 0
TUBE1-201ENST00000368657 TRAPPC3LQ5T215 181 aa15.06■□□□□ 0
TUBE1-201ENST00000368657 IP6K1Q92551 441 aa15.06■□□□□ 0
TUBE1-201ENST00000368657 CGNL1Q0VF96 1302 aa15.06■□□□□ 0
TUBE1-201ENST00000368657 GNPATO15228 680 aa15.05■□□□□ -0
TUBE1-201ENST00000368657 PRPF38BQ5VTL8 546 aaKnown RBP15.05■□□□□ -0
TUBE1-201ENST00000368657 KDM6AO15550 1401 aaPredicted RBP15.05■□□□□ -0
TUBE1-201ENST00000368657 VIRMAQ69YN4 1812 aaKnown RBP15.04■□□□□ -0
TUBE1-201ENST00000368657 PPARGC1BQ86YN6 1023 aaKnown RBP15.04■□□□□ -0
TUBE1-201ENST00000368657 PASKQ96RG2 1323 aa15.03■□□□□ -0
TUBE1-201ENST00000368657 DEFB115Q30KQ5 88 aa15.03■□□□□ -0
TUBE1-201ENST00000368657 LINC00116Q8NCU8 138 aa15.03■□□□□ -0
TUBE1-201ENST00000368657 LTV1Q96GA3 475 aaPredicted RBP15.03■□□□□ -0
TUBE1-201ENST00000368657 BEGAINQ9BUH8 593 aa15.03■□□□□ -0
TUBE1-201ENST00000368657 KTN1Q86UP2 1357 aaKnown RBP15.02■□□□□ -0
TUBE1-201ENST00000368657 EVC2Q86UK5 1308 aa15.02■□□□□ -0
TUBE1-201ENST00000368657 LOC102724428A0A0B4J2F2 783 aa15.02■□□□□ -0
TUBE1-201ENST00000368657 SIK1P57059 783 aa15.02■□□□□ -0
TUBE1-201ENST00000368657 LTN1O94822 1766 aa15.02□□□□□ -0.01
TUBE1-201ENST00000368657 FAM208AQ9UK61 1670 aaKnown RBP15.01□□□□□ -0.01
TUBE1-201ENST00000368657 RASSF7Q02833 373 aa15.01□□□□□ -0.01
TUBE1-201ENST00000368657 RTCBQ9Y3I0 505 aaKnown RBP15.01□□□□□ -0.01
TUBE1-201ENST00000368657 WDR33Q9C0J8 1336 aaKnown RBP15□□□□□ -0.01
TUBE1-201ENST00000368657 RASSF10A6NK89 507 aa15□□□□□ -0.01
TUBE1-201ENST00000368657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.01
TUBE1-201ENST00000368657 GYS1P13807 737 aa14.99□□□□□ -0.01
TUBE1-201ENST00000368657 C4AP0C0L4 1744 aa14.99□□□□□ -0.01
TUBE1-201ENST00000368657 ATP6V1AP38606 617 aa14.98□□□□□ -0.01
TUBE1-201ENST00000368657 RAPGEF4Q8WZA2 1011 aa14.98□□□□□ -0.01
TUBE1-201ENST00000368657 MCOLN1Q9GZU1 580 aa14.98□□□□□ -0.01
TUBE1-201ENST00000368657 PCDH11XQ9BZA7 1347 aa14.97□□□□□ -0.01
TUBE1-201ENST00000368657 PCDH11YQ9BZA8 1340 aa14.97□□□□□ -0.01
TUBE1-201ENST00000368657 RFC4P35249 363 aa14.97□□□□□ -0.01
TUBE1-201ENST00000368657 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
TUBE1-201ENST00000368657 PIGBQ92521 554 aa14.97□□□□□ -0.01
TUBE1-201ENST00000368657 ARHGEF1Q92888 912 aaKnown RBP14.97□□□□□ -0.01
TUBE1-201ENST00000368657 ZBTB12Q9Y330 459 aaPredicted RBP14.97□□□□□ -0.01
TUBE1-201ENST00000368657 ITGBL1O95965 494 aaPredicted RBP14.96□□□□□ -0.01
TUBE1-201ENST00000368657 CHRNA5P30532 468 aa14.96□□□□□ -0.01
TUBE1-201ENST00000368657 NBPF1Q3BBV0 1214 aa14.96□□□□□ -0.01
TUBE1-201ENST00000368657 NME9Q86XW9 330 aa14.96□□□□□ -0.01
TUBE1-201ENST00000368657 GCC1Q96CN9 775 aa14.96□□□□□ -0.01
TUBE1-201ENST00000368657 MEGF6O75095 1541 aa14.96□□□□□ -0.02
TUBE1-201ENST00000368657 POTEIP0CG38 1075 aa14.95□□□□□ -0.02
TUBE1-201ENST00000368657 POTEJP0CG39 1038 aa14.95□□□□□ -0.02
TUBE1-201ENST00000368657 TATP17735 454 aaPredicted RBP14.95□□□□□ -0.02
TUBE1-201ENST00000368657 ITPK1Q13572 414 aa14.95□□□□□ -0.02
TUBE1-201ENST00000368657 RC3H1Q5TC82 1133 aaKnown RBP14.94□□□□□ -0.02
TUBE1-201ENST00000368657 IQCA1LA6NCM1 817 aa14.93□□□□□ -0.02
TUBE1-201ENST00000368657 CD163L1Q9NR16 1453 aa14.93□□□□□ -0.02
TUBE1-201ENST00000368657 MAP2P11137 1827 aaKnown RBP14.92□□□□□ -0.02
TUBE1-201ENST00000368657 ECE1P42892 770 aa14.92□□□□□ -0.02
TUBE1-201ENST00000368657 CA12O43570 354 aa14.91□□□□□ -0.02
TUBE1-201ENST00000368657 RPS6KA4O75676 772 aa14.91□□□□□ -0.02
TUBE1-201ENST00000368657 HOXC9P31274 260 aa14.91□□□□□ -0.02
TUBE1-201ENST00000368657 AMPHP49418 695 aa14.91□□□□□ -0.02
TUBE1-201ENST00000368657 ERFEQ4G0M1 354 aa14.91□□□□□ -0.02
TUBE1-201ENST00000368657 NBPF6Q5VWK0 638 aa14.91□□□□□ -0.02
TUBE1-201ENST00000368657 NBPF4Q96M43 638 aa14.91□□□□□ -0.02
TUBE1-201ENST00000368657 CCDC88AQ3V6T2 1871 aa14.91□□□□□ -0.02
TUBE1-201ENST00000368657 ITGB4P16144 1822 aa14.9□□□□□ -0.02
TUBE1-201ENST00000368657 CYP27B1O15528 508 aa14.9□□□□□ -0.02
TUBE1-201ENST00000368657 DGKZQ13574 1117 aa14.9□□□□□ -0.02
TUBE1-201ENST00000368657 TTLL6Q8N841 843 aa14.9□□□□□ -0.02
TUBE1-201ENST00000368657 RBM42Q9BTD8 480 aaKnown RBP14.9□□□□□ -0.02
TUBE1-201ENST00000368657 MAP3K19Q56UN5 1328 aa14.9□□□□□ -0.02
TUBE1-201ENST00000368657 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
TUBE1-201ENST00000368657 GPR101Q96P66 508 aaPredicted RBP14.89□□□□□ -0.03
TUBE1-201ENST00000368657 ASAP1Q9ULH1 1129 aa14.89□□□□□ -0.03
TUBE1-201ENST00000368657 ABT1Q9ULW3 272 aaKnown RBP14.89□□□□□ -0.03
TUBE1-201ENST00000368657 TIAM2Q8IVF5 1701 aa14.89□□□□□ -0.03
TUBE1-201ENST00000368657 NFKBIEO00221 500 aa14.88□□□□□ -0.03
TUBE1-201ENST00000368657 DDNO94850 711 aaPredicted RBP14.88□□□□□ -0.03
TUBE1-201ENST00000368657 TMOD3Q9NYL9 352 aa14.88□□□□□ -0.03
TUBE1-201ENST00000368657 SBNO2Q9Y2G9 1366 aa14.87□□□□□ -0.03
TUBE1-201ENST00000368657 MAP2K2P36507 400 aa14.87□□□□□ -0.03
TUBE1-201ENST00000368657 CAPNS2Q96L46 248 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms