RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 RRS1Q15050 365 aaKnown RBP10.1□□□□□ -0.79
SSR2-202ENST00000368311 CCDC146Q8IYE0 955 aa10.1□□□□□ -0.79
SSR2-202ENST00000368311 CSPP1Q1MSJ5 1256 aa10.1□□□□□ -0.79
SSR2-202ENST00000368311 CNKSR1Q969H4 720 aa10.1□□□□□ -0.79
SSR2-202ENST00000368311 MAP3K5Q99683 1374 aa10.1□□□□□ -0.79
SSR2-202ENST00000368311 VPS72Q15906 364 aa10.1□□□□□ -0.79
SSR2-202ENST00000368311 DIAPH3Q9NSV4 1193 aa10.1□□□□□ -0.79
SSR2-202ENST00000368311 IL16Q14005 1332 aa10.09□□□□□ -0.79
SSR2-202ENST00000368311 ZNF804AQ7Z570 1209 aa10.09□□□□□ -0.79
SSR2-202ENST00000368311 UTP14AQ9BVJ6 771 aaKnown RBP10.09□□□□□ -0.79
SSR2-202ENST00000368311 TWISTNBQ3B726 338 aaPredicted RBP10.09□□□□□ -0.79
SSR2-202ENST00000368311 AIDAQ96BJ3 306 aa10.09□□□□□ -0.79
SSR2-202ENST00000368311 CEP126Q9P2H0 1117 aa10.09□□□□□ -0.79
SSR2-202ENST00000368311 TRMT112Q9UI30 125 aaKnown RBP10.09□□□□□ -0.79
SSR2-202ENST00000368311 SPATA31A3Q5VYP0 1347 aa10.09□□□□□ -0.79
SSR2-202ENST00000368311 CCDC27Q2M243 656 aa10.09□□□□□ -0.79
SSR2-202ENST00000368311 XBP1P17861 261 aa10.09□□□□□ -0.79
SSR2-202ENST00000368311 BICDL1Q6ZP65 573 aa10.09□□□□□ -0.79
SSR2-202ENST00000368311 DNAJC2Q99543 621 aaKnown RBP10.09□□□□□ -0.79
SSR2-202ENST00000368311 BRINP3Q76B58 766 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 PRKRIP1Q9H875 184 aaPredicted RBP10.08□□□□□ -0.8
SSR2-202ENST00000368311 ADRA2BP18089 450 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 CCDC178Q5BJE1 867 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 MADDQ8WXG6 1647 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 MROH2AA6NES4 1674 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 CLASRPQ8N2M8 674 aaKnown RBP10.08□□□□□ -0.8
SSR2-202ENST00000368311 DNAI2Q9GZS0 605 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 EHMT1Q9H9B1 1298 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 SPON1Q9HCB6 807 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 ERBB4Q15303 1308 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 HOXC9P31274 260 aa10.08□□□□□ -0.8
SSR2-202ENST00000368311 NCBP3Q53F19 620 aaKnown RBP10.08□□□□□ -0.8
SSR2-202ENST00000368311 PHF14O94880 888 aa10.07□□□□□ -0.8
SSR2-202ENST00000368311 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
SSR2-202ENST00000368311 BRMS1Q9HCU9 246 aa10.07□□□□□ -0.8
SSR2-202ENST00000368311 CWC25Q9NXE8 425 aaPredicted RBP10.07□□□□□ -0.8
SSR2-202ENST00000368311 PREX1Q8TCU6 1659 aa10.07□□□□□ -0.8
SSR2-202ENST00000368311 ASXL1Q8IXJ9 1541 aa10.07□□□□□ -0.8
SSR2-202ENST00000368311 GNAI2P04899 355 aa10.07□□□□□ -0.8
SSR2-202ENST00000368311 HOXB7P09629 217 aa10.07□□□□□ -0.8
SSR2-202ENST00000368311 CCDC43Q96MW1 224 aaKnown RBP10.07□□□□□ -0.8
SSR2-202ENST00000368311 RNF17Q9BXT8 1623 aaKnown RBP10.07□□□□□ -0.8
SSR2-202ENST00000368311 SETD1BQ9UPS6 1966 aaKnown RBP10.07□□□□□ -0.8
SSR2-202ENST00000368311 IFIT5Q13325 482 aaKnown RBP10.07□□□□□ -0.8
SSR2-202ENST00000368311 DZIP1LQ8IYY4 767 aaKnown RBP10.07□□□□□ -0.8
SSR2-202ENST00000368311 CNBD1Q8NA66 436 aa10.07□□□□□ -0.8
SSR2-202ENST00000368311 CCDC47Q96A33 483 aaKnown RBP10.07□□□□□ -0.8
SSR2-202ENST00000368311 ZKSCAN1P17029 563 aaPredicted RBP10.06□□□□□ -0.8
SSR2-202ENST00000368311 L1TD1Q5T7N2 865 aaKnown RBP10.06□□□□□ -0.8
SSR2-202ENST00000368311 OTUD7BQ6GQQ9 843 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 WDR17Q8IZU2 1322 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 GNPATO15228 680 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 PLCG2P16885 1265 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 HSPA1LP34931 641 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
SSR2-202ENST00000368311 ORAI2Q96SN7 254 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 ABCA6Q8N139 1617 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 DLC1Q96QB1 1528 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 NRDCO43847 1150 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 BAG3O95817 575 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 HLA-DOAP06340 250 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 TCIRG1Q13488 830 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 VPS53Q5VIR6 699 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 CROCC2H7BZ55 1655 aa10.06□□□□□ -0.8
SSR2-202ENST00000368311 APAF1O14727 1248 aa10.05□□□□□ -0.8
SSR2-202ENST00000368311 TTF1Q15361 905 aaPredicted RBP10.05□□□□□ -0.8
SSR2-202ENST00000368311 ANKRD18AQ8IVF6 992 aa10.05□□□□□ -0.8
SSR2-202ENST00000368311 PTPRCP08575 1304 aa10.05□□□□□ -0.8
SSR2-202ENST00000368311 GOLGA6L4A6NEF3 574 aa10.05□□□□□ -0.8
SSR2-202ENST00000368311 TRIM29Q14134 588 aa10.05□□□□□ -0.8
SSR2-202ENST00000368311 SPATA31D1Q6ZQQ2 1576 aa10.05□□□□□ -0.8
SSR2-202ENST00000368311 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
SSR2-202ENST00000368311 UQCRFS1P1P0C7P4 283 aa10.05□□□□□ -0.8
SSR2-202ENST00000368311 NPC1L1Q9UHC9 1359 aa10.05□□□□□ -0.8
SSR2-202ENST00000368311 APPP05067 770 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 ALDH1L2Q3SY69 923 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 C6orf229H3BNL8 230 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 KIF22Q14807 665 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 ACSBG1Q96GR2 724 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 FAM177BA6PVY3 158 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 KDM4FA0A1W2PPD8 638 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 DHX16O60231 1041 aaKnown RBP10.04□□□□□ -0.8
SSR2-202ENST00000368311 LRRCC1Q9C099 1032 aa10.04□□□□□ -0.8
SSR2-202ENST00000368311 TULP1O00294 542 aaPredicted RBP10.03□□□□□ -0.8
SSR2-202ENST00000368311 CLSTN1O94985 981 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 DZIP3Q86Y13 1208 aaKnown RBP10.03□□□□□ -0.8
SSR2-202ENST00000368311 NIM1KQ8IY84 436 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 CABP5Q9NP86 173 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 RALYLQ86SE5 291 aaKnown RBP10.03□□□□□ -0.8
SSR2-202ENST00000368311 PLEKHH1Q9ULM0 1364 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 TULP4Q9NRJ4 1543 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 RAB11FIP3O75154 756 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 MYL6BP14649 208 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 CNTROBQ8N137 903 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 BCORL1Q5H9F3 1711 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 MVPQ14764 893 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms