RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.57■□□□□ 0.56
PMF1-202ENST00000368277 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
PMF1-202ENST00000368277 N4BP2Q86UW6 1770 aaPredicted RBP18.57■□□□□ 0.56
PMF1-202ENST00000368277 TJP1Q07157 1748 aa18.56■□□□□ 0.56
PMF1-202ENST00000368277 ZNF831Q5JPB2 1677 aa18.56■□□□□ 0.56
PMF1-202ENST00000368277 KIAA1551Q9HCM1 1747 aa18.55■□□□□ 0.56
PMF1-202ENST00000368277 ATP6V1AP38606 617 aa18.55■□□□□ 0.56
PMF1-202ENST00000368277 KDRP35968 1356 aa18.55■□□□□ 0.56
PMF1-202ENST00000368277 GNPATO15228 680 aa18.54■□□□□ 0.56
PMF1-202ENST00000368277 ZNF530Q6P9A1 599 aaPredicted RBP18.54■□□□□ 0.56
PMF1-202ENST00000368277 SLC4A9Q96Q91 983 aa18.54■□□□□ 0.56
PMF1-202ENST00000368277 KIF13BQ9NQT8 1826 aa18.53■□□□□ 0.56
PMF1-202ENST00000368277 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
PMF1-202ENST00000368277 KIF7Q2M1P5 1343 aa18.52■□□□□ 0.56
PMF1-202ENST00000368277 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.56
PMF1-202ENST00000368277 CICQ96RK0 1608 aaPredicted RBP18.5■□□□□ 0.55
PMF1-202ENST00000368277 SSFA2P28290 1259 aa18.5■□□□□ 0.55
PMF1-202ENST00000368277 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
PMF1-202ENST00000368277 SULT6B1Q6IMI4 303 aa18.5■□□□□ 0.55
PMF1-202ENST00000368277 KNSTRNQ9Y448 316 aa18.5■□□□□ 0.55
PMF1-202ENST00000368277 AMER1Q5JTC6 1135 aaPredicted RBP18.49■□□□□ 0.55
PMF1-202ENST00000368277 IL13P35225 146 aa18.48■□□□□ 0.55
PMF1-202ENST00000368277 CNGB1Q14028 1251 aaPredicted RBP18.48■□□□□ 0.55
PMF1-202ENST00000368277 CD2APQ9Y5K6 639 aa18.48■□□□□ 0.55
PMF1-202ENST00000368277 BRCA1P38398 1863 aaKnown RBP18.48■□□□□ 0.55
PMF1-202ENST00000368277 PLEKHG2Q9H7P9 1386 aa18.47■□□□□ 0.55
PMF1-202ENST00000368277 ERVV-2B6SEH9 535 aa18.47■□□□□ 0.55
PMF1-202ENST00000368277 CABP4P57796 275 aa18.47■□□□□ 0.55
PMF1-202ENST00000368277 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
PMF1-202ENST00000368277 ADAMTS7Q9UKP4 1686 aa18.45■□□□□ 0.54
PMF1-202ENST00000368277 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
PMF1-202ENST00000368277 MTHFSP49914 203 aa18.45■□□□□ 0.54
PMF1-202ENST00000368277 C1orf141Q5JVX7 400 aa18.45■□□□□ 0.54
PMF1-202ENST00000368277 CC2D1BQ5T0F9 858 aaKnown RBP18.45■□□□□ 0.54
PMF1-202ENST00000368277 GRIN3BO60391 1043 aa18.44■□□□□ 0.54
PMF1-202ENST00000368277 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
PMF1-202ENST00000368277 MMP10P09238 476 aa18.44■□□□□ 0.54
PMF1-202ENST00000368277 HMOX1P09601 288 aa18.44■□□□□ 0.54
PMF1-202ENST00000368277 AMOTQ4VCS5 1084 aa18.44■□□□□ 0.54
PMF1-202ENST00000368277 ATP10DQ9P241 1426 aa18.43■□□□□ 0.54
PMF1-202ENST00000368277 HMGB2P26583 209 aaKnown RBP18.43■□□□□ 0.54
PMF1-202ENST00000368277 NFATC2IPQ8NCF5 419 aa18.43■□□□□ 0.54
PMF1-202ENST00000368277 RTCBQ9Y3I0 505 aaKnown RBP18.43■□□□□ 0.54
PMF1-202ENST00000368277 PXDNLA1KZ92 1463 aa18.42■□□□□ 0.54
PMF1-202ENST00000368277 C1QTNF8P60827 252 aa18.42■□□□□ 0.54
PMF1-202ENST00000368277 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
PMF1-202ENST00000368277 CNTNAP4Q9C0A0 1308 aa18.42■□□□□ 0.54
PMF1-202ENST00000368277 UBR2Q8IWV8 1755 aa18.41■□□□□ 0.54
PMF1-202ENST00000368277 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
PMF1-202ENST00000368277 GIGYF1O75420 1035 aaPredicted RBP18.41■□□□□ 0.54
PMF1-202ENST00000368277 TRAPPC3LQ5T215 181 aa18.41■□□□□ 0.54
PMF1-202ENST00000368277 AFDNP55196 1824 aaKnown RBP18.41■□□□□ 0.54
PMF1-202ENST00000368277 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
PMF1-202ENST00000368277 MRC1P22897 1456 aa18.4■□□□□ 0.54
PMF1-202ENST00000368277 LGR6Q9HBX8 967 aa18.4■□□□□ 0.54
PMF1-202ENST00000368277 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
PMF1-202ENST00000368277 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
PMF1-202ENST00000368277 ZNF526Q8TF50 670 aaPredicted RBP18.39■□□□□ 0.53
PMF1-202ENST00000368277 SRP68Q9UHB9 627 aaKnown RBP18.39■□□□□ 0.53
PMF1-202ENST00000368277 C10orf71Q711Q0 1435 aa18.39■□□□□ 0.53
PMF1-202ENST00000368277 KCPQ6ZWJ8 1503 aa18.39■□□□□ 0.53
PMF1-202ENST00000368277 ARFGEF1Q9Y6D6 1849 aa18.38■□□□□ 0.53
PMF1-202ENST00000368277 RPS6KA4O75676 772 aa18.38■□□□□ 0.53
PMF1-202ENST00000368277 GYS1P13807 737 aa18.38■□□□□ 0.53
PMF1-202ENST00000368277 CRKLP46109 303 aaKnown RBP18.38■□□□□ 0.53
PMF1-202ENST00000368277 RFC4P35249 363 aa18.37■□□□□ 0.53
PMF1-202ENST00000368277 SLC39A6Q13433 755 aa18.37■□□□□ 0.53
PMF1-202ENST00000368277 AKAP4Q5JQC9 854 aa18.37■□□□□ 0.53
PMF1-202ENST00000368277 RC3H1Q5TC82 1133 aaKnown RBP18.37■□□□□ 0.53
PMF1-202ENST00000368277 ADCY9O60503 1353 aa18.37■□□□□ 0.53
PMF1-202ENST00000368277 MTHFSDQ2M296 383 aaKnown RBP18.36■□□□□ 0.53
PMF1-202ENST00000368277 DNAJC10Q8IXB1 793 aa18.36■□□□□ 0.53
PMF1-202ENST00000368277 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
PMF1-202ENST00000368277 RNMTO43148 476 aaKnown RBP18.35■□□□□ 0.53
PMF1-202ENST00000368277 SLC52A2Q9HAB3 445 aa18.35■□□□□ 0.53
PMF1-202ENST00000368277 DIAPH1O60610 1272 aaKnown RBP18.34■□□□□ 0.53
PMF1-202ENST00000368277 ADRA2BP18089 450 aa18.34■□□□□ 0.53
PMF1-202ENST00000368277 FKBP8Q14318 412 aa18.33■□□□□ 0.52
PMF1-202ENST00000368277 INTS5Q6P9B9 1019 aaKnown RBP18.33■□□□□ 0.52
PMF1-202ENST00000368277 NLGN1Q8N2Q7 840 aa18.33■□□□□ 0.52
PMF1-202ENST00000368277 USP42Q9H9J4 1324 aaKnown RBP18.32■□□□□ 0.52
PMF1-202ENST00000368277 DPEP1P16444 411 aa18.32■□□□□ 0.52
PMF1-202ENST00000368277 DDR1Q08345 913 aa18.32■□□□□ 0.52
PMF1-202ENST00000368277 BCS1LQ9Y276 419 aa18.32■□□□□ 0.52
PMF1-202ENST00000368277 PARP3Q9Y6F1 533 aa18.32■□□□□ 0.52
PMF1-202ENST00000368277 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
PMF1-202ENST00000368277 CCDC87Q9NVE4 849 aa18.31■□□□□ 0.52
PMF1-202ENST00000368277 SBF1O95248 1867 aa18.31■□□□□ 0.52
PMF1-202ENST00000368277 DLEC1Q9Y238 1755 aa18.3■□□□□ 0.52
PMF1-202ENST00000368277 GPBP1L1Q9HC44 474 aaPredicted RBP18.3■□□□□ 0.52
PMF1-202ENST00000368277 CCDC88AQ3V6T2 1871 aa18.3■□□□□ 0.52
PMF1-202ENST00000368277 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
PMF1-202ENST00000368277 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
PMF1-202ENST00000368277 USPL1Q5W0Q7 1092 aa18.29■□□□□ 0.52
PMF1-202ENST00000368277 SOS1Q07889 1333 aaPredicted RBP18.28■□□□□ 0.52
PMF1-202ENST00000368277 CYP19A1P11511 503 aaPredicted RBP18.28■□□□□ 0.52
PMF1-202ENST00000368277 ZBTB1Q9Y2K1 713 aa18.28■□□□□ 0.52
PMF1-202ENST00000368277 SCN7AQ01118 1682 aa18.28■□□□□ 0.52
PMF1-202ENST00000368277 ANKRD31Q8N7Z5 1873 aa18.27■□□□□ 0.52
PMF1-202ENST00000368277 TGFB2P61812 414 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms