RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 EPXP11678 715 aa8.58□□□□□ -1.04
XCL1-201ENST00000367818 CLN3Q13286 438 aa8.58□□□□□ -1.04
XCL1-201ENST00000367818 RSPO4Q2I0M5 234 aaPredicted RBP8.58□□□□□ -1.04
XCL1-201ENST00000367818 BTBD6Q96KE9 485 aa8.58□□□□□ -1.04
XCL1-201ENST00000367818 PNMA1Q8ND90 353 aa8.57□□□□□ -1.04
XCL1-201ENST00000367818 ATXN7L1Q9ULK2 861 aaPredicted RBP8.57□□□□□ -1.04
XCL1-201ENST00000367818 UBAP2LQ14157 1087 aaKnown RBP8.56□□□□□ -1.04
XCL1-201ENST00000367818 LBRQ14739 615 aaKnown RBP8.56□□□□□ -1.04
XCL1-201ENST00000367818 NBPF11Q86T75 865 aa8.56□□□□□ -1.04
XCL1-201ENST00000367818 C2CD2LO14523 706 aa8.54□□□□□ -1.04
XCL1-201ENST00000367818 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
XCL1-201ENST00000367818 NKAPLQ5M9Q1 402 aa8.54□□□□□ -1.04
XCL1-201ENST00000367818 CC2D2BQ6DHV5 1058 aa8.54□□□□□ -1.04
XCL1-201ENST00000367818 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
XCL1-201ENST00000367818 RNF135Q8IUD6 432 aa8.54□□□□□ -1.04
XCL1-201ENST00000367818 ZC3H15Q8WU90 426 aaKnown RBP8.54□□□□□ -1.04
XCL1-201ENST00000367818 GOLGA2P5Q9HBQ8 144 aa8.54□□□□□ -1.04
XCL1-201ENST00000367818 A0A1B0GTH6 734 aa8.53□□□□□ -1.04
XCL1-201ENST00000367818 ARAFP10398 606 aa8.52□□□□□ -1.05
XCL1-201ENST00000367818 FGFR3P22607 806 aa8.52□□□□□ -1.05
XCL1-201ENST00000367818 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
XCL1-201ENST00000367818 POLR3EQ9NVU0 708 aa8.52□□□□□ -1.05
XCL1-201ENST00000367818 DYRK3O43781 588 aa8.51□□□□□ -1.05
XCL1-201ENST00000367818 SPATA31C1P0DKV0 1188 aa8.51□□□□□ -1.05
XCL1-201ENST00000367818 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
XCL1-201ENST00000367818 ARHGEF10LQ9HCE6 1279 aa8.51□□□□□ -1.05
XCL1-201ENST00000367818 CSB-PGBD3P0DP91 1061 aa8.5□□□□□ -1.05
XCL1-201ENST00000367818 HAP1P54257 671 aaPredicted RBP8.5□□□□□ -1.05
XCL1-201ENST00000367818 CHSY3Q70JA7 882 aa8.5□□□□□ -1.05
XCL1-201ENST00000367818 CCDC125Q86Z20 511 aa8.5□□□□□ -1.05
XCL1-201ENST00000367818 PGBD3Q8N328 593 aa8.5□□□□□ -1.05
XCL1-201ENST00000367818 CTBSQ01459 385 aa8.49□□□□□ -1.05
XCL1-201ENST00000367818 EFHC2Q5JST6 749 aa8.49□□□□□ -1.05
XCL1-201ENST00000367818 EPS8L1Q8TE68 723 aa8.49□□□□□ -1.05
XCL1-201ENST00000367818 AK7Q96M32 723 aa8.49□□□□□ -1.05
XCL1-201ENST00000367818 TPSG1Q9NRR2 321 aa8.49□□□□□ -1.05
XCL1-201ENST00000367818 NDFIP2Q9NV92 336 aa8.49□□□□□ -1.05
XCL1-201ENST00000367818 NEURL1BA8MQ27 555 aa8.48□□□□□ -1.05
XCL1-201ENST00000367818 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
XCL1-201ENST00000367818 RUBCNLQ9H714 662 aa8.48□□□□□ -1.05
XCL1-201ENST00000367818 PHKA2P46019 1235 aa8.48□□□□□ -1.05
XCL1-201ENST00000367818 TRIM11Q96F44 468 aa8.48□□□□□ -1.05
XCL1-201ENST00000367818 BNIP3LO60238 219 aa8.47□□□□□ -1.05
XCL1-201ENST00000367818 SCTRP47872 440 aa8.46□□□□□ -1.06
XCL1-201ENST00000367818 PLVAPQ9BX97 442 aa8.46□□□□□ -1.06
XCL1-201ENST00000367818 CCDC180Q9P1Z9 1646 aa8.45□□□□□ -1.06
XCL1-201ENST00000367818 PDE4DQ08499 809 aa8.45□□□□□ -1.06
XCL1-201ENST00000367818 LRP8Q14114 963 aa8.45□□□□□ -1.06
XCL1-201ENST00000367818 PRSS36Q5K4E3 855 aa8.45□□□□□ -1.06
XCL1-201ENST00000367818 RAB6BQ9NRW1 208 aa8.45□□□□□ -1.06
XCL1-201ENST00000367818 PCDHB9Q9Y5E1 797 aa8.45□□□□□ -1.06
XCL1-201ENST00000367818 TRAK2O60296 914 aa8.44□□□□□ -1.06
XCL1-201ENST00000367818 ADH6P28332 368 aa8.44□□□□□ -1.06
XCL1-201ENST00000367818 MSX1P28360 303 aa8.44□□□□□ -1.06
XCL1-201ENST00000367818 FBXO31Q5XUX0 539 aaPredicted RBP8.44□□□□□ -1.06
XCL1-201ENST00000367818 OSBPL3Q9H4L5 887 aa8.44□□□□□ -1.06
XCL1-201ENST00000367818 HMX1Q9NP08 348 aaPredicted RBP8.44□□□□□ -1.06
XCL1-201ENST00000367818 AP1G2O75843 785 aa8.43□□□□□ -1.06
XCL1-201ENST00000367818 GNASQ5JWF2 1037 aa8.43□□□□□ -1.06
XCL1-201ENST00000367818 RNF20Q5VTR2 975 aa8.43□□□□□ -1.06
XCL1-201ENST00000367818 CNKSR1Q969H4 720 aa8.43□□□□□ -1.06
XCL1-201ENST00000367818 ZSCAN10Q96SZ4 725 aaPredicted RBP8.43□□□□□ -1.06
XCL1-201ENST00000367818 ESYT1Q9BSJ8 1104 aa8.43□□□□□ -1.06
XCL1-201ENST00000367818 CENPCQ03188 943 aa8.42□□□□□ -1.06
XCL1-201ENST00000367818 GNRH1P01148 92 aa8.41□□□□□ -1.06
XCL1-201ENST00000367818 IL2RAP01589 272 aa8.41□□□□□ -1.06
XCL1-201ENST00000367818 GTF2E1P29083 439 aaPredicted RBP8.41□□□□□ -1.06
XCL1-201ENST00000367818 C4orf17Q53FE4 359 aa8.41□□□□□ -1.06
XCL1-201ENST00000367818 FCHSD1Q86WN1 690 aa8.41□□□□□ -1.06
XCL1-201ENST00000367818 CRISPLD1Q9H336 500 aa8.41□□□□□ -1.06
XCL1-201ENST00000367818 SPDYE3A6NKU9 549 aa8.4□□□□□ -1.06
XCL1-201ENST00000367818 APBA3O96018 575 aa8.4□□□□□ -1.06
XCL1-201ENST00000367818 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
XCL1-201ENST00000367818 FIGNL1Q6PIW4 674 aa8.4□□□□□ -1.06
XCL1-201ENST00000367818 AVENQ9NQS1 362 aaPredicted RBP8.4□□□□□ -1.06
XCL1-201ENST00000367818 PRRT3Q5FWE3 981 aa8.39□□□□□ -1.07
XCL1-201ENST00000367818 ESF1Q9H501 851 aaKnown RBP8.39□□□□□ -1.07
XCL1-201ENST00000367818 PCDHB11Q9Y5F2 797 aa8.39□□□□□ -1.07
XCL1-201ENST00000367818 HRH3Q9Y5N1 445 aa8.39□□□□□ -1.07
XCL1-201ENST00000367818 ZBBXA8MT70 800 aa8.38□□□□□ -1.07
XCL1-201ENST00000367818 TMEM214Q6NUQ4 689 aaKnown RBP8.38□□□□□ -1.07
XCL1-201ENST00000367818 KLF15Q9UIH9 416 aa8.38□□□□□ -1.07
XCL1-201ENST00000367818 FHDC1Q9C0D6 1143 aaPredicted RBP8.37□□□□□ -1.07
XCL1-201ENST00000367818 DNAAF2Q9NVR5 837 aaKnown RBP8.37□□□□□ -1.07
XCL1-201ENST00000367818 PCDHGC4Q9Y5F7 938 aa8.37□□□□□ -1.07
XCL1-201ENST00000367818 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.36□□□□□ -1.07
XCL1-201ENST00000367818 SKIV2LQ15477 1246 aaKnown RBP8.35□□□□□ -1.07
XCL1-201ENST00000367818 FAM182BQ5T319 152 aa8.35□□□□□ -1.07
XCL1-201ENST00000367818 ZCCHC2Q9C0B9 1178 aaKnown RBP8.35□□□□□ -1.07
XCL1-201ENST00000367818 HYAL3O43820 417 aaPredicted RBP8.35□□□□□ -1.07
XCL1-201ENST00000367818 FBXO45P0C2W1 286 aa8.35□□□□□ -1.07
XCL1-201ENST00000367818 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
XCL1-201ENST00000367818 KRTAP4-7Q9BYR0 210 aa8.35□□□□□ -1.07
XCL1-201ENST00000367818 RHBDD1Q8TEB9 315 aa8.34□□□□□ -1.07
XCL1-201ENST00000367818 XAGE2Q96GT9 111 aa8.34□□□□□ -1.07
XCL1-201ENST00000367818 H2AFB1P0C5Y9 115 aa8.33□□□□□ -1.08
XCL1-201ENST00000367818 H2AFB2P0C5Z0 115 aa8.33□□□□□ -1.08
XCL1-201ENST00000367818 CD33P20138 364 aa8.33□□□□□ -1.08
XCL1-201ENST00000367818 SH3D19Q5HYK7 790 aa8.33□□□□□ -1.08
XCL1-201ENST00000367818 MCTP1Q6DN14 999 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms