RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
SF3B5-201ENST00000367569 AMIGO3Q86WK7 504 aa19.71■□□□□ 0.75
SF3B5-201ENST00000367569 IFNL2Q8IZJ0 200 aa19.71■□□□□ 0.75
SF3B5-201ENST00000367569 CFAP53Q96M91 514 aa19.71■□□□□ 0.75
SF3B5-201ENST00000367569 PLEKHO1Q53GL0 409 aaPredicted RBP19.7■□□□□ 0.74
SF3B5-201ENST00000367569 HMGB2P26583 209 aaKnown RBP19.69■□□□□ 0.74
SF3B5-201ENST00000367569 SMIM5Q71RC9 77 aa19.69■□□□□ 0.74
SF3B5-201ENST00000367569 PELP1Q8IZL8 1130 aaKnown RBP19.69■□□□□ 0.74
SF3B5-201ENST00000367569 FLAD1Q8NFF5 587 aa19.69■□□□□ 0.74
SF3B5-201ENST00000367569 TMOD3Q9NYL9 352 aa19.69■□□□□ 0.74
SF3B5-201ENST00000367569 AK7Q96M32 723 aa19.68■□□□□ 0.74
SF3B5-201ENST00000367569 ASAP1Q9ULH1 1129 aa19.68■□□□□ 0.74
SF3B5-201ENST00000367569 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
SF3B5-201ENST00000367569 LOC102724428A0A0B4J2F2 783 aa19.67■□□□□ 0.74
SF3B5-201ENST00000367569 SIK1P57059 783 aa19.67■□□□□ 0.74
SF3B5-201ENST00000367569 C1orf141Q5JVX7 400 aa19.66■□□□□ 0.74
SF3B5-201ENST00000367569 LINC00116Q8NCU8 138 aa19.66■□□□□ 0.74
SF3B5-201ENST00000367569 PHF14O94880 888 aa19.65■□□□□ 0.74
SF3B5-201ENST00000367569 ITPK1Q13572 414 aa19.65■□□□□ 0.74
SF3B5-201ENST00000367569 ATG3Q9NT62 314 aa19.65■□□□□ 0.74
SF3B5-201ENST00000367569 PLEKHG2Q9H7P9 1386 aa19.65■□□□□ 0.74
SF3B5-201ENST00000367569 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.64■□□□□ 0.73
SF3B5-201ENST00000367569 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
SF3B5-201ENST00000367569 U2AF1L5P0DN76 240 aaPredicted RBP19.64■□□□□ 0.73
SF3B5-201ENST00000367569 PRKAR2BP31323 418 aa19.64■□□□□ 0.73
SF3B5-201ENST00000367569 U2AF1Q01081 240 aaKnown RBP eCLIP19.64■□□□□ 0.73
SF3B5-201ENST00000367569 MTHFSDQ2M296 383 aaKnown RBP19.64■□□□□ 0.73
SF3B5-201ENST00000367569 AMOTQ4VCS5 1084 aa19.64■□□□□ 0.73
SF3B5-201ENST00000367569 ADAMTS7Q9UKP4 1686 aa19.64■□□□□ 0.73
SF3B5-201ENST00000367569 DLG5Q8TDM6 1919 aa19.64■□□□□ 0.73
SF3B5-201ENST00000367569 YBX3P16989 372 aaKnown RBP eCLIP19.63■□□□□ 0.732e-11■■■□□ 18.7
SF3B5-201ENST00000367569 ATP6V1AP38606 617 aa19.63■□□□□ 0.73
SF3B5-201ENST00000367569 RSPH6AQ9H0K4 717 aa19.62■□□□□ 0.73
SF3B5-201ENST00000367569 ERVV-2B6SEH9 535 aa19.61■□□□□ 0.73
SF3B5-201ENST00000367569 SSFA2P28290 1259 aa19.61■□□□□ 0.73
SF3B5-201ENST00000367569 CD2APQ9Y5K6 639 aa19.61■□□□□ 0.73
SF3B5-201ENST00000367569 SIPA1L3O60292 1781 aaPredicted RBP19.61■□□□□ 0.73
SF3B5-201ENST00000367569 MRC1P22897 1456 aa19.6■□□□□ 0.73
SF3B5-201ENST00000367569 MYBBP1AQ9BQG0 1328 aaKnown RBP19.6■□□□□ 0.73
SF3B5-201ENST00000367569 GNPATO15228 680 aa19.6■□□□□ 0.73
SF3B5-201ENST00000367569 RALBP1Q15311 655 aa19.6■□□□□ 0.73
SF3B5-201ENST00000367569 DCAF5Q96JK2 942 aa19.6■□□□□ 0.73
SF3B5-201ENST00000367569 PHACTR3Q96KR7 559 aa19.6■□□□□ 0.73
SF3B5-201ENST00000367569 SLC4A9Q96Q91 983 aa19.6■□□□□ 0.73
SF3B5-201ENST00000367569 NUDCQ9Y266 331 aa19.6■□□□□ 0.73
SF3B5-201ENST00000367569 COL5A3P25940 1745 aaPredicted RBP19.59■□□□□ 0.73
SF3B5-201ENST00000367569 TJP1Q07157 1748 aa19.59■□□□□ 0.73
SF3B5-201ENST00000367569 GRIN3BO60391 1043 aa19.58■□□□□ 0.72
SF3B5-201ENST00000367569 HSP90AB1P08238 724 aaKnown RBP19.58■□□□□ 0.72
SF3B5-201ENST00000367569 CABP4P57796 275 aa19.58■□□□□ 0.72
SF3B5-201ENST00000367569 AKAP4Q5JQC9 854 aa19.58■□□□□ 0.72
SF3B5-201ENST00000367569 LGR6Q9HBX8 967 aa19.58■□□□□ 0.72
SF3B5-201ENST00000367569 RBM42Q9BTD8 480 aaKnown RBP19.56■□□□□ 0.72
SF3B5-201ENST00000367569 PRKRIP1Q9H875 184 aaPredicted RBP19.56■□□□□ 0.72
SF3B5-201ENST00000367569 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
SF3B5-201ENST00000367569 RNMTO43148 476 aaKnown RBP19.54■□□□□ 0.72
SF3B5-201ENST00000367569 NFATC2IPQ8NCF5 419 aa19.54■□□□□ 0.72
SF3B5-201ENST00000367569 ZNF831Q5JPB2 1677 aa19.53■□□□□ 0.72
SF3B5-201ENST00000367569 GAS2L2Q8NHY3 880 aa19.53■□□□□ 0.72
SF3B5-201ENST00000367569 TRAPPC3LQ5T215 181 aa19.52■□□□□ 0.72
SF3B5-201ENST00000367569 RTCBQ9Y3I0 505 aaKnown RBP19.52■□□□□ 0.72
SF3B5-201ENST00000367569 KCPQ6ZWJ8 1503 aa19.51■□□□□ 0.71
SF3B5-201ENST00000367569 PTCD1O75127 700 aaKnown RBP19.51■□□□□ 0.71
SF3B5-201ENST00000367569 SLC39A6Q13433 755 aa19.51■□□□□ 0.71
SF3B5-201ENST00000367569 RC3H1Q5TC82 1133 aaKnown RBP19.51■□□□□ 0.71
SF3B5-201ENST00000367569 SLC52A2Q9HAB3 445 aa19.51■□□□□ 0.71
SF3B5-201ENST00000367569 WWC3Q9ULE0 1092 aa19.51■□□□□ 0.71
SF3B5-201ENST00000367569 MYH14Q7Z406 1995 aaKnown RBP19.51■□□□□ 0.71
SF3B5-201ENST00000367569 GNAT3A8MTJ3 354 aa19.5■□□□□ 0.71
SF3B5-201ENST00000367569 MMP10P09238 476 aa19.5■□□□□ 0.71
SF3B5-201ENST00000367569 C1QTNF8P60827 252 aa19.5■□□□□ 0.71
SF3B5-201ENST00000367569 ARHGEF1Q92888 912 aaKnown RBP19.5■□□□□ 0.71
SF3B5-201ENST00000367569 C4AP0C0L4 1744 aa19.5■□□□□ 0.71
SF3B5-201ENST00000367569 CICQ96RK0 1608 aaPredicted RBP19.5■□□□□ 0.71
SF3B5-201ENST00000367569 CNTNAP4Q9C0A0 1308 aa19.5■□□□□ 0.71
SF3B5-201ENST00000367569 FCHSD2O94868 740 aa19.49■□□□□ 0.71
SF3B5-201ENST00000367569 DCTN1Q14203 1278 aa19.49■□□□□ 0.71
SF3B5-201ENST00000367569 CCDC146Q8IYE0 955 aa19.49■□□□□ 0.71
SF3B5-201ENST00000367569 RPS6KA4O75676 772 aa19.48■□□□□ 0.71
SF3B5-201ENST00000367569 MCM10Q7L590 875 aa19.48■□□□□ 0.71
SF3B5-201ENST00000367569 IL17REQ8NFR9 667 aa19.48■□□□□ 0.71
SF3B5-201ENST00000367569 ADRA2BP18089 450 aa19.47■□□□□ 0.71
SF3B5-201ENST00000367569 NLGN1Q8N2Q7 840 aa19.47■□□□□ 0.71
SF3B5-201ENST00000367569 MAPK8IP3Q9UPT6 1336 aa19.47■□□□□ 0.71
SF3B5-201ENST00000367569 GIGYF1O75420 1035 aaPredicted RBP19.46■□□□□ 0.71
SF3B5-201ENST00000367569 CCDC184Q52MB2 194 aa19.46■□□□□ 0.71
SF3B5-201ENST00000367569 GYS1P13807 737 aa19.45■□□□□ 0.7
SF3B5-201ENST00000367569 RFC4P35249 363 aa19.45■□□□□ 0.7
SF3B5-201ENST00000367569 TEFQ10587 303 aa19.45■□□□□ 0.7
SF3B5-201ENST00000367569 PLEKHF1Q96S99 279 aa19.45■□□□□ 0.7
SF3B5-201ENST00000367569 CEMIPQ8WUJ3 1361 aa19.44■□□□□ 0.7
SF3B5-201ENST00000367569 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
SF3B5-201ENST00000367569 ATP10DQ9P241 1426 aa19.44■□□□□ 0.7
SF3B5-201ENST00000367569 CRKLP46109 303 aaKnown RBP19.44■□□□□ 0.7
SF3B5-201ENST00000367569 WDR43Q15061 677 aaKnown RBP eCLIP19.44■□□□□ 0.7
SF3B5-201ENST00000367569 KIF13BQ9NQT8 1826 aa19.44■□□□□ 0.7
SF3B5-201ENST00000367569 KIAA1551Q9HCM1 1747 aa19.43■□□□□ 0.7
SF3B5-201ENST00000367569 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
SF3B5-201ENST00000367569 NEFMP07197 916 aa19.43■□□□□ 0.7
SF3B5-201ENST00000367569 THUMPD2Q9BTF0 503 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms