RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 BIRC2Q13490 618 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 CFAP100Q494V2 611 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 NUP155O75694 1391 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 ZNF396Q96N95 335 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 EPB41L2O43491 1005 aaKnown RBP12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 FERMT3Q86UX7 667 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 BCL2L12Q9HB09 334 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 MAP4K4O95819 1239 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 CCDC175P0C221 793 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 PTGS1P23219 599 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 KLHL40Q2TBA0 621 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 SEPT6Q14141 434 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
CDC42BPA-205ENST00000366769 CEP112Q8N8E3 955 aa12.83□□□□□ -0.35
CDC42BPA-205ENST00000366769 A0A1B0GUA9 196 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 FSD1Q9BTV5 496 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 CCDC114Q96M63 670 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 DESP17661 470 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 PDCP20941 246 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 EBAG9O00559 213 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 MICAL3Q7RTP6 2002 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 COMMD10Q9Y6G5 202 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 ZSCAN12O43309 604 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 DDX23Q9BUQ8 820 aaKnown RBP12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 TBC1D2BQ9UPU7 963 aa12.83□□□□□ -0.36
CDC42BPA-205ENST00000366769 STAMBPO95630 424 aa12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 SKILP12757 684 aa12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 RBM5P52756 815 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 GOLGA4Q13439 2230 aaKnown RBP12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 UBE4AQ14139 1066 aa12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 TSPYL4Q9UJ04 414 aa12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 IFFO1Q0D2I5 559 aa12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 SWAP70Q9UH65 585 aa12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 CCDC12Q8WUD4 166 aaPredicted RBP12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 SETD1BQ9UPS6 1966 aaKnown RBP12.82□□□□□ -0.36
CDC42BPA-205ENST00000366769 TCHHQ07283 1943 aa12.81□□□□□ -0.36
CDC42BPA-205ENST00000366769 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
CDC42BPA-205ENST00000366769 KIF3BO15066 747 aa12.81□□□□□ -0.36
CDC42BPA-205ENST00000366769 STX1AQ16623 288 aa12.81□□□□□ -0.36
CDC42BPA-205ENST00000366769 MRFAP1L1Q96HT8 127 aa12.81□□□□□ -0.36
CDC42BPA-205ENST00000366769 OTUD6BQ8N6M0 293 aa12.81□□□□□ -0.36
CDC42BPA-205ENST00000366769 GOPCQ9HD26 462 aa12.81□□□□□ -0.36
CDC42BPA-205ENST00000366769 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
CDC42BPA-205ENST00000366769 PPARDQ03181 441 aa12.81□□□□□ -0.36
CDC42BPA-205ENST00000366769 OAS2P29728 719 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 GIMAP6Q6P9H5 292 aa12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 KIF4BQ2VIQ3 1234 aa12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 MIPOL1Q8TD10 442 aa12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 SPATA24Q86W54 205 aa12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 MRFAP1Q9Y605 127 aa12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 ZEB2O60315 1214 aa12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 LARP1BQ659C4 914 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 CNPY2Q9Y2B0 182 aa12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 SLU7O95391 586 aaKnown RBP12.8□□□□□ -0.36
CDC42BPA-205ENST00000366769 PSMA5P28066 241 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 GNG11P61952 73 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 ZSCAN26Q16670 478 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 SEPT14Q6ZU15 432 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 TMEM87AQ8NBN3 555 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 RBSNQ9H1K0 784 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 CNTROBQ8N137 903 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 DNAI1Q9UI46 699 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 PLEKHA4Q9H4M7 779 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 SMC1AQ14683 1233 aaKnown RBP12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 NBPF8Q3BBV2 869 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 ATRIPQ8WXE1 791 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 RHOXF2BP0C7M4 288 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 RHOXF2Q9BQY4 288 aa12.79□□□□□ -0.36
CDC42BPA-205ENST00000366769 CASTP20810 708 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 SLC24A3Q9HC58 644 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 INPP5BP32019 993 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 RIPK4P57078 832 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 ERC1Q8IUD2 1116 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 NUTM2GQ5VZR2 741 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 MCM2P49736 904 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 GOLGA1Q92805 767 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 TOP1P11387 765 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 CTNNBL1Q8WYA6 563 aaPredicted RBP12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 CEP83Q9Y592 693 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 FMNL3Q8IVF7 1028 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 IRAK4Q9NWZ3 460 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 NEMFO60524 1076 aa12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 DZIP1Q86YF9 867 aaKnown RBP12.78□□□□□ -0.36
CDC42BPA-205ENST00000366769 CCDC186Q7Z3E2 898 aa12.77□□□□□ -0.36
CDC42BPA-205ENST00000366769 MCM3P25205 808 aa12.77□□□□□ -0.36
CDC42BPA-205ENST00000366769 PEG3Q9GZU2 1588 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms