RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SFPQP23246 707 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 GSDMDP57764 484 aa13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 TXNDC2Q86VQ3 553 aa13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 DENND4BO75064 1496 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 SBNO2Q9Y2G9 1366 aa13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 CDC42BPAQ5VT25 1732 aa13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 WASF1Q92558 559 aa13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 PCMTD1Q96MG8 357 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 UPF3BQ9BZI7 483 aaKnown RBP13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 LUC7LQ9NQ29 371 aaKnown RBP13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 EXOC6BQ9Y2D4 811 aa13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 LEKR1Q6ZMV7 388 aa13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 CCDC158Q5M9N0 1113 aa13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 CWC27Q6UX04 472 aaKnown RBP13.89□□□□□ -0.19
CDC42BPA-202ENST00000366764 TTC37Q6PGP7 1564 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 PIK3R4Q99570 1358 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 TAF7Q15545 349 aaPredicted RBP13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 LRSAM1Q6UWE0 723 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 MYO6Q9UM54 1294 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 CROCC2H7BZ55 1655 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 ANO10Q9NW15 660 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 SLC3A2P08195 630 aaKnown RBP13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 CFAP74Q9C0B2 1584 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 NLRP2Q9NX02 1062 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 CEP170Q5SW79 1584 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 RBM10P98175 930 aaKnown RBP13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 PDILTQ8N807 584 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 AIMP1Q12904 312 aaKnown RBP13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 STIM1Q13586 685 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 CLSTN1O94985 981 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 AMOTQ4VCS5 1084 aa13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 INTS4Q96HW7 963 aaKnown RBP13.88□□□□□ -0.19
CDC42BPA-202ENST00000366764 MAGI3Q5TCQ9 1506 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 WASLO00401 505 aaPredicted RBP13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 ATP7AQ04656 1500 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 ADCY10Q96PN6 1610 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 RRS1Q15050 365 aaKnown RBP13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 TSPYL1Q9H0U9 437 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 SERPINC1P01008 464 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 PPFIBP1Q86W92 1011 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 NACAP1Q9BZK3 213 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 WDR7Q9Y4E6 1490 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 CGNQ9P2M7 1197 aaKnown RBP13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 KCNH5Q8NCM2 988 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 ZNHIT6Q9NWK9 470 aaKnown RBP13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 STX6O43752 255 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 ANKRD44Q8N8A2 993 aa13.87□□□□□ -0.19
CDC42BPA-202ENST00000366764 PREX2Q70Z35 1606 aa13.86□□□□□ -0.19
CDC42BPA-202ENST00000366764 ZSCAN12O43309 604 aa13.86□□□□□ -0.19
CDC42BPA-202ENST00000366764 TUBB4AP04350 444 aa13.86□□□□□ -0.19
CDC42BPA-202ENST00000366764 RBM25P49756 843 aaKnown RBP13.86□□□□□ -0.19
CDC42BPA-202ENST00000366764 MBIPQ9NS73 344 aa13.86□□□□□ -0.19
CDC42BPA-202ENST00000366764 PTPN14Q15678 1187 aa13.86□□□□□ -0.19
CDC42BPA-202ENST00000366764 DNAJC2Q99543 621 aaKnown RBP13.86□□□□□ -0.19
CDC42BPA-202ENST00000366764 SKAP1Q86WV1 359 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 PRDM15P57071 1507 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 PAXBP1Q9Y5B6 917 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 CYB5RLQ6IPT4 315 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 HYPKQ9NX55 129 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 DCTN1Q14203 1278 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 LARP1Q6PKG0 1096 aaKnown RBP13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 TERF1P54274 439 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 EVA1CP58658 441 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 CAGE1Q8TC20 777 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 EVI5LQ96CN4 794 aa13.85□□□□□ -0.19
CDC42BPA-202ENST00000366764 BTBD11A6QL63 1104 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 FLIIQ13045 1269 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 KIF6Q6ZMV9 814 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 TATP17735 454 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 STX1AQ16623 288 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 FMNL2Q96PY5 1086 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 ATF3P18847 181 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 FBXW7Q969H0 707 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 ABCC1P33527 1531 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 GOLGA6L9A6NEM1 432 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 UBXN4Q92575 508 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 MAGEC2Q9UBF1 373 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 CLASP1Q7Z460 1538 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 GBP3Q9H0R5 595 aa13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
CDC42BPA-202ENST00000366764 PRKCSHP14314 528 aaPredicted RBP13.83□□□□□ -0.19
CDC42BPA-202ENST00000366764 THUMPD2Q9BTF0 503 aaKnown RBP13.83□□□□□ -0.19
CDC42BPA-202ENST00000366764 ECHDC1Q9NTX5 307 aa13.83□□□□□ -0.2
CDC42BPA-202ENST00000366764 ZKSCAN5Q9Y2L8 839 aa13.83□□□□□ -0.2
CDC42BPA-202ENST00000366764 FOSBP53539 338 aa13.83□□□□□ -0.2
CDC42BPA-202ENST00000366764 ZSCAN16Q9H4T2 348 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPA-202ENST00000366764 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.2
CDC42BPA-202ENST00000366764 DBF4Q9UBU7 674 aaPredicted RBP13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 MCM10Q7L590 875 aa13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 LRRFIP2Q9Y608 721 aaKnown RBP13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 KDM6BO15054 1643 aa13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 MCM3P25205 808 aa13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 DNAAF4Q8WXU2 420 aa13.82□□□□□ -0.2
CDC42BPA-202ENST00000366764 DCTPP1Q9H773 170 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms