RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 SIK1P57059 783 aa16.21■□□□□ 0.19
MRPL55-213ENST00000366740 LINC00116Q8NCU8 138 aa16.21■□□□□ 0.19
MRPL55-213ENST00000366740 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.21■□□□□ 0.19
MRPL55-213ENST00000366740 SPG7Q9UQ90 795 aa16.21■□□□□ 0.19
MRPL55-213ENST00000366740 WDR90Q96KV7 1748 aa16.21■□□□□ 0.19
MRPL55-213ENST00000366740 KDRP35968 1356 aa16.21■□□□□ 0.19
MRPL55-213ENST00000366740 PHF14O94880 888 aa16.2■□□□□ 0.18
MRPL55-213ENST00000366740 SMIM5Q71RC9 77 aa16.2■□□□□ 0.18
MRPL55-213ENST00000366740 PXDNLA1KZ92 1463 aa16.2■□□□□ 0.18
MRPL55-213ENST00000366740 ADAMTS7Q9UKP4 1686 aa16.2■□□□□ 0.18
MRPL55-213ENST00000366740 CCDC88AQ3V6T2 1871 aa16.2■□□□□ 0.18
MRPL55-213ENST00000366740 AFDNP55196 1824 aaKnown RBP16.19■□□□□ 0.18
MRPL55-213ENST00000366740 DLEC1Q9Y238 1755 aa16.18■□□□□ 0.18
MRPL55-213ENST00000366740 HSPA6P17066 643 aa16.18■□□□□ 0.18
MRPL55-213ENST00000366740 ITPK1Q13572 414 aa16.18■□□□□ 0.18
MRPL55-213ENST00000366740 EYA1Q99502 592 aa16.18■□□□□ 0.18
MRPL55-213ENST00000366740 TMOD3Q9NYL9 352 aa16.18■□□□□ 0.18
MRPL55-213ENST00000366740 PHKG2P15735 406 aa16.17■□□□□ 0.18
MRPL55-213ENST00000366740 ASAP1Q9ULH1 1129 aa16.17■□□□□ 0.18
MRPL55-213ENST00000366740 C10orf71Q711Q0 1435 aa16.17■□□□□ 0.18
MRPL55-213ENST00000366740 TNRC6CQ9HCJ0 1690 aaKnown RBP16.17■□□□□ 0.18
MRPL55-213ENST00000366740 GNPATO15228 680 aa16.16■□□□□ 0.18
MRPL55-213ENST00000366740 IFNL2Q8IZJ0 200 aa16.16■□□□□ 0.18
MRPL55-213ENST00000366740 ATP6V1AP38606 617 aa16.15■□□□□ 0.18
MRPL55-213ENST00000366740 ZNF526Q8TF50 670 aaPredicted RBP16.15■□□□□ 0.18
MRPL55-213ENST00000366740 PPM1GO15355 546 aaPredicted RBP16.14■□□□□ 0.17
MRPL55-213ENST00000366740 ATG3Q9NT62 314 aa16.14■□□□□ 0.17
MRPL55-213ENST00000366740 POLKQ9UBT6 870 aa16.14■□□□□ 0.17
MRPL55-213ENST00000366740 WWC3Q9ULE0 1092 aa16.14■□□□□ 0.17
MRPL55-213ENST00000366740 KIF3CO14782 793 aa16.13■□□□□ 0.17
MRPL55-213ENST00000366740 KDM6AO15550 1401 aaPredicted RBP16.12■□□□□ 0.17
MRPL55-213ENST00000366740 NRXN2Q9P2S2 1712 aa16.12■□□□□ 0.17
MRPL55-213ENST00000366740 MMP10P09238 476 aa16.12■□□□□ 0.17
MRPL55-213ENST00000366740 TGFB2P61812 414 aa16.11■□□□□ 0.17
MRPL55-213ENST00000366740 EIF4A2Q14240 407 aaKnown RBP16.11■□□□□ 0.17
MRPL55-213ENST00000366740 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
MRPL55-213ENST00000366740 CNTNAP4Q9C0A0 1308 aa16.11■□□□□ 0.17
MRPL55-213ENST00000366740 UBR2Q8IWV8 1755 aa16.1■□□□□ 0.17
MRPL55-213ENST00000366740 RTCBQ9Y3I0 505 aaKnown RBP16.1■□□□□ 0.17
MRPL55-213ENST00000366740 DICER1Q9UPY3 1922 aaKnown RBP16.09■□□□□ 0.17
MRPL55-213ENST00000366740 TIAM2Q8IVF5 1701 aa16.09■□□□□ 0.17
MRPL55-213ENST00000366740 ERVV-2B6SEH9 535 aa16.09■□□□□ 0.17
MRPL55-213ENST00000366740 ADRA2BP18089 450 aa16.09■□□□□ 0.17
MRPL55-213ENST00000366740 TRAPPC3LQ5T215 181 aa16.09■□□□□ 0.17
MRPL55-213ENST00000366740 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
MRPL55-213ENST00000366740 NLGN1Q8N2Q7 840 aa16.09■□□□□ 0.17
MRPL55-213ENST00000366740 DCAF5Q96JK2 942 aa16.08■□□□□ 0.16
MRPL55-213ENST00000366740 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
MRPL55-213ENST00000366740 HSPA5P11021 654 aaKnown RBP16.07■□□□□ 0.16
MRPL55-213ENST00000366740 GYS1P13807 737 aa16.07■□□□□ 0.16
MRPL55-213ENST00000366740 ARHGEF1Q92888 912 aaKnown RBP16.07■□□□□ 0.16
MRPL55-213ENST00000366740 CACNA1SQ13698 1873 aa16.06■□□□□ 0.16
MRPL55-213ENST00000366740 RPS6KA4O75676 772 aa16.06■□□□□ 0.16
MRPL55-213ENST00000366740 BCS1LQ9Y276 419 aa16.06■□□□□ 0.16
MRPL55-213ENST00000366740 A0A0G2JLW4 131 aa16.05■□□□□ 0.16
MRPL55-213ENST00000366740 EIF4G2P78344 907 aaKnown RBP eCLIP16.05■□□□□ 0.16
MRPL55-213ENST00000366740 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
MRPL55-213ENST00000366740 CCDC87Q9NVE4 849 aa16.05■□□□□ 0.16
MRPL55-213ENST00000366740 ANKRD31Q8N7Z5 1873 aa16.05■□□□□ 0.16
MRPL55-213ENST00000366740 SIPA1L3O60292 1781 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-213ENST00000366740 TOMM70O94826 608 aa16.04■□□□□ 0.16
MRPL55-213ENST00000366740 MRC1P22897 1456 aa16.03■□□□□ 0.16
MRPL55-213ENST00000366740 DPEP1P16444 411 aa16.03■□□□□ 0.16
MRPL55-213ENST00000366740 APLP1P51693 650 aa16.03■□□□□ 0.16
MRPL55-213ENST00000366740 PLEKHO1Q53GL0 409 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-213ENST00000366740 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
MRPL55-213ENST00000366740 FER1L6Q2WGJ9 1857 aa16.02■□□□□ 0.16
MRPL55-213ENST00000366740 KCNA3P22001 575 aa16.02■□□□□ 0.16
MRPL55-213ENST00000366740 RFC4P35249 363 aa16.02■□□□□ 0.16
MRPL55-213ENST00000366740 TNNT2P45379 298 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-213ENST00000366740 AMOTQ4VCS5 1084 aa16.02■□□□□ 0.16
MRPL55-213ENST00000366740 ZNF530Q6P9A1 599 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-213ENST00000366740 ARFGEF2Q9Y6D5 1785 aa16.02■□□□□ 0.15
MRPL55-213ENST00000366740 FCHSD2O94868 740 aa16.01■□□□□ 0.15
MRPL55-213ENST00000366740 CABP4P57796 275 aa16.01■□□□□ 0.15
MRPL55-213ENST00000366740 SCN7AQ01118 1682 aa16.01■□□□□ 0.15
MRPL55-213ENST00000366740 USP42Q9H9J4 1324 aaKnown RBP16■□□□□ 0.15
MRPL55-213ENST00000366740 KCPQ6ZWJ8 1503 aa16■□□□□ 0.15
MRPL55-213ENST00000366740 ARHGAP27Q6ZUM4 889 aa16■□□□□ 0.15
MRPL55-213ENST00000366740 DNAJC5GQ8N7S2 189 aa16■□□□□ 0.15
MRPL55-213ENST00000366740 NMRK2Q9NPI5 230 aa16■□□□□ 0.15
MRPL55-213ENST00000366740 CRKLP46109 303 aaKnown RBP15.99■□□□□ 0.15
MRPL55-213ENST00000366740 COL11A2P13942 1736 aaPredicted RBP15.99■□□□□ 0.15
MRPL55-213ENST00000366740 AEBP1Q8IUX7 1158 aa15.98■□□□□ 0.15
MRPL55-213ENST00000366740 RBM46Q8TBY0 533 aaKnown RBP15.98■□□□□ 0.15
MRPL55-213ENST00000366740 PIM2Q9P1W9 311 aa15.98■□□□□ 0.15
MRPL55-213ENST00000366740 BCORQ6W2J9 1755 aa15.98■□□□□ 0.15
MRPL55-213ENST00000366740 PTCD1O75127 700 aaKnown RBP15.97■□□□□ 0.15
MRPL55-213ENST00000366740 MTHFSP49914 203 aa15.97■□□□□ 0.15
MRPL55-213ENST00000366740 DDR1Q08345 913 aa15.97■□□□□ 0.15
MRPL55-213ENST00000366740 C9orf131Q5VYM1 1079 aa15.97■□□□□ 0.15
MRPL55-213ENST00000366740 POLR3GLQ9BT43 218 aa15.97■□□□□ 0.15
MRPL55-213ENST00000366740 SRP68Q9UHB9 627 aaKnown RBP15.97■□□□□ 0.15
MRPL55-213ENST00000366740 FKBP8Q14318 412 aa15.96■□□□□ 0.15
MRPL55-213ENST00000366740 C1orf141Q5JVX7 400 aa15.96■□□□□ 0.15
MRPL55-213ENST00000366740 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.15
MRPL55-213ENST00000366740 PANK3Q9H999 370 aa15.96■□□□□ 0.15
MRPL55-213ENST00000366740 DALRD3Q5D0E6 543 aaKnown RBP15.95■□□□□ 0.14
MRPL55-213ENST00000366740 POLRMTO00411 1230 aaKnown RBP15.94■□□□□ 0.14
MRPL55-213ENST00000366740 TM4SF1P30408 202 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms