RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
MRPL55-211ENST00000366738 CYP27B1O15528 508 aa11.22□□□□□ -0.61
MRPL55-211ENST00000366738 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.61
MRPL55-211ENST00000366738 SMG6Q86US8 1419 aaKnown RBP11.21□□□□□ -0.61
MRPL55-211ENST00000366738 FLT4P35916 1363 aa11.21□□□□□ -0.61
MRPL55-211ENST00000366738 GNPATO15228 680 aa11.21□□□□□ -0.61
MRPL55-211ENST00000366738 MMP10P09238 476 aa11.21□□□□□ -0.61
MRPL55-211ENST00000366738 SSFA2P28290 1259 aa11.21□□□□□ -0.61
MRPL55-211ENST00000366738 TNS4Q8IZW8 715 aa11.21□□□□□ -0.61
MRPL55-211ENST00000366738 SMARCC1Q92922 1105 aaPredicted RBP11.21□□□□□ -0.61
MRPL55-211ENST00000366738 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.62
MRPL55-211ENST00000366738 NCAPD2Q15021 1401 aa11.2□□□□□ -0.62
MRPL55-211ENST00000366738 C10orf71Q711Q0 1435 aa11.2□□□□□ -0.62
MRPL55-211ENST00000366738 A0A0G2JLW4 131 aa11.2□□□□□ -0.62
MRPL55-211ENST00000366738 DDX10Q13206 875 aaKnown RBP11.2□□□□□ -0.62
MRPL55-211ENST00000366738 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
MRPL55-211ENST00000366738 JMYQ8N9B5 988 aa11.2□□□□□ -0.62
MRPL55-211ENST00000366738 RBM46Q8TBY0 533 aaKnown RBP11.2□□□□□ -0.62
MRPL55-211ENST00000366738 PIGBQ92521 554 aa11.2□□□□□ -0.62
MRPL55-211ENST00000366738 BRCA1P38398 1863 aaKnown RBP11.19□□□□□ -0.62
MRPL55-211ENST00000366738 KIF24Q5T7B8 1368 aa11.19□□□□□ -0.62
MRPL55-211ENST00000366738 LOC102724428A0A0B4J2F2 783 aa11.19□□□□□ -0.62
MRPL55-211ENST00000366738 SIK1P57059 783 aa11.19□□□□□ -0.62
MRPL55-211ENST00000366738 ITPK1Q13572 414 aa11.19□□□□□ -0.62
MRPL55-211ENST00000366738 KCPQ6ZWJ8 1503 aa11.19□□□□□ -0.62
MRPL55-211ENST00000366738 DPEP1P16444 411 aa11.18□□□□□ -0.62
MRPL55-211ENST00000366738 HMGB2P26583 209 aaKnown RBP11.18□□□□□ -0.62
MRPL55-211ENST00000366738 PRELPP51888 382 aa11.18□□□□□ -0.62
MRPL55-211ENST00000366738 C9orf131Q5VYM1 1079 aa11.18□□□□□ -0.62
MRPL55-211ENST00000366738 C16orf71Q8IYS4 520 aaPredicted RBP11.18□□□□□ -0.62
MRPL55-211ENST00000366738 PANK3Q9H999 370 aa11.18□□□□□ -0.62
MRPL55-211ENST00000366738 FCHSD2O94868 740 aa11.17□□□□□ -0.62
MRPL55-211ENST00000366738 C4AP0C0L4 1744 aa11.17□□□□□ -0.62
MRPL55-211ENST00000366738 PLEKHG2Q9H7P9 1386 aa11.16□□□□□ -0.62
MRPL55-211ENST00000366738 PPM1GO15355 546 aaPredicted RBP11.16□□□□□ -0.62
MRPL55-211ENST00000366738 ATP6V1AP38606 617 aa11.16□□□□□ -0.62
MRPL55-211ENST00000366738 TGFB2P61812 414 aa11.16□□□□□ -0.62
MRPL55-211ENST00000366738 FSTL1Q12841 308 aa11.16□□□□□ -0.62
MRPL55-211ENST00000366738 EYA1Q99502 592 aa11.16□□□□□ -0.62
MRPL55-211ENST00000366738 POLKQ9UBT6 870 aa11.16□□□□□ -0.62
MRPL55-211ENST00000366738 ASAP1Q9ULH1 1129 aa11.16□□□□□ -0.62
MRPL55-211ENST00000366738 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
MRPL55-211ENST00000366738 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
MRPL55-211ENST00000366738 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
MRPL55-211ENST00000366738 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
MRPL55-211ENST00000366738 RRAGCQ9HB90 399 aa11.14□□□□□ -0.63
MRPL55-211ENST00000366738 CCDC87Q9NVE4 849 aa11.14□□□□□ -0.63
MRPL55-211ENST00000366738 RNF181Q9P0P0 153 aa11.14□□□□□ -0.63
MRPL55-211ENST00000366738 KDRP35968 1356 aa11.14□□□□□ -0.63
MRPL55-211ENST00000366738 PER1O15534 1290 aaPredicted RBP11.13□□□□□ -0.63
MRPL55-211ENST00000366738 KCNA3P22001 575 aa11.13□□□□□ -0.63
MRPL55-211ENST00000366738 TNNT2P45379 298 aaPredicted RBP11.13□□□□□ -0.63
MRPL55-211ENST00000366738 EIF4A2Q14240 407 aaKnown RBP11.13□□□□□ -0.63
MRPL55-211ENST00000366738 KDM2BQ8NHM5 1336 aa11.12□□□□□ -0.63
MRPL55-211ENST00000366738 HSPA1AP0DMV8 641 aaKnown RBP11.12□□□□□ -0.63
MRPL55-211ENST00000366738 HSPA1BP0DMV9 641 aaKnown RBP11.12□□□□□ -0.63
MRPL55-211ENST00000366738 GYS1P13807 737 aa11.12□□□□□ -0.63
MRPL55-211ENST00000366738 TRAPPC3LQ5T215 181 aa11.12□□□□□ -0.63
MRPL55-211ENST00000366738 NLGN1Q8N2Q7 840 aa11.12□□□□□ -0.63
MRPL55-211ENST00000366738 SLC4A9Q96Q91 983 aa11.12□□□□□ -0.63
MRPL55-211ENST00000366738 ATG3Q9NT62 314 aa11.12□□□□□ -0.63
MRPL55-211ENST00000366738 RTCBQ9Y3I0 505 aaKnown RBP11.12□□□□□ -0.63
MRPL55-211ENST00000366738 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
MRPL55-211ENST00000366738 PHKG2P15735 406 aa11.11□□□□□ -0.63
MRPL55-211ENST00000366738 CNGB1Q14028 1251 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-211ENST00000366738 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
MRPL55-211ENST00000366738 SMC1BQ8NDV3 1235 aa11.11□□□□□ -0.63
MRPL55-211ENST00000366738 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
MRPL55-211ENST00000366738 DCAF5Q96JK2 942 aa11.11□□□□□ -0.63
MRPL55-211ENST00000366738 SPG7Q9UQ90 795 aa11.11□□□□□ -0.63
MRPL55-211ENST00000366738 PARP3Q9Y6F1 533 aa11.11□□□□□ -0.63
MRPL55-211ENST00000366738 SBF1O95248 1867 aa11.1□□□□□ -0.63
MRPL55-211ENST00000366738 DALRD3Q5D0E6 543 aaKnown RBP11.1□□□□□ -0.63
MRPL55-211ENST00000366738 PIM2Q9P1W9 311 aa11.1□□□□□ -0.63
MRPL55-211ENST00000366738 MYH14Q7Z406 1995 aaKnown RBP11.1□□□□□ -0.63
MRPL55-211ENST00000366738 CHRNA5P30532 468 aa11.09□□□□□ -0.63
MRPL55-211ENST00000366738 RASSF7Q02833 373 aa11.09□□□□□ -0.63
MRPL55-211ENST00000366738 CC2D1BQ5T0F9 858 aaKnown RBP11.09□□□□□ -0.63
MRPL55-211ENST00000366738 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
MRPL55-211ENST00000366738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.09□□□□□ -0.63
MRPL55-211ENST00000366738 KNSTRNQ9Y448 316 aa11.09□□□□□ -0.63
MRPL55-211ENST00000366738 ADRA2BP18089 450 aa11.08□□□□□ -0.64
MRPL55-211ENST00000366738 RFC4P35249 363 aa11.08□□□□□ -0.64
MRPL55-211ENST00000366738 DDR1Q08345 913 aa11.08□□□□□ -0.64
MRPL55-211ENST00000366738 SRP68Q9UHB9 627 aaKnown RBP11.08□□□□□ -0.64
MRPL55-211ENST00000366738 CNTNAP4Q9C0A0 1308 aa11.08□□□□□ -0.64
MRPL55-211ENST00000366738 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
MRPL55-211ENST00000366738 NPC1L1Q9UHC9 1359 aa11.07□□□□□ -0.64
MRPL55-211ENST00000366738 DIEXFQ68CQ4 756 aaKnown RBP11.07□□□□□ -0.64
MRPL55-211ENST00000366738 AEBP1Q8IUX7 1158 aa11.07□□□□□ -0.64
MRPL55-211ENST00000366738 IFNL2Q8IZJ0 200 aa11.07□□□□□ -0.64
MRPL55-211ENST00000366738 KDM6AO15550 1401 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-211ENST00000366738 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
MRPL55-211ENST00000366738 RPS6KA4O75676 772 aa11.06□□□□□ -0.64
MRPL55-211ENST00000366738 FKBP8Q14318 412 aa11.06□□□□□ -0.64
MRPL55-211ENST00000366738 RC3H1Q5TC82 1133 aaKnown RBP11.06□□□□□ -0.64
MRPL55-211ENST00000366738 USP42Q9H9J4 1324 aaKnown RBP11.04□□□□□ -0.64
MRPL55-211ENST00000366738 TJP1Q07157 1748 aa11.04□□□□□ -0.64
MRPL55-211ENST00000366738 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
MRPL55-211ENST00000366738 ADAMTS7Q9UKP4 1686 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms