RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 KIF13BQ9NQT8 1826 aa17.05■□□□□ 0.32
MRPL55-209ENST00000366735 SSFA2P28290 1259 aa17.05■□□□□ 0.32
MRPL55-209ENST00000366735 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
MRPL55-209ENST00000366735 PIGBQ92521 554 aa17.04■□□□□ 0.32
MRPL55-209ENST00000366735 EYA1Q99502 592 aa17.04■□□□□ 0.32
MRPL55-209ENST00000366735 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
MRPL55-209ENST00000366735 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
MRPL55-209ENST00000366735 PHF14O94880 888 aa17.03■□□□□ 0.32
MRPL55-209ENST00000366735 SIK1P57059 783 aa17.03■□□□□ 0.32
MRPL55-209ENST00000366735 PHKG2P15735 406 aa17.02■□□□□ 0.32
MRPL55-209ENST00000366735 YBX3P16989 372 aaKnown RBP eCLIP17.02■□□□□ 0.322e-6■□□□□ 10.7
MRPL55-209ENST00000366735 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
MRPL55-209ENST00000366735 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
MRPL55-209ENST00000366735 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
MRPL55-209ENST00000366735 C4AP0C0L4 1744 aa17.01■□□□□ 0.31
MRPL55-209ENST00000366735 ATP6V1AP38606 617 aa17■□□□□ 0.31
MRPL55-209ENST00000366735 EIF4G2P78344 907 aaKnown RBP eCLIP17■□□□□ 0.31
MRPL55-209ENST00000366735 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
MRPL55-209ENST00000366735 GNPATO15228 680 aa16.99■□□□□ 0.31
MRPL55-209ENST00000366735 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-209ENST00000366735 EIF4A2Q14240 407 aaKnown RBP16.99■□□□□ 0.31
MRPL55-209ENST00000366735 N4BP2Q86UW6 1770 aaPredicted RBP16.99■□□□□ 0.31
MRPL55-209ENST00000366735 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
MRPL55-209ENST00000366735 ATP10DQ9P241 1426 aa16.98■□□□□ 0.31
MRPL55-209ENST00000366735 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
MRPL55-209ENST00000366735 CICQ96RK0 1608 aaPredicted RBP16.98■□□□□ 0.31
MRPL55-209ENST00000366735 ASAP1Q9ULH1 1129 aa16.97■□□□□ 0.31
MRPL55-209ENST00000366735 KDRP35968 1356 aa16.97■□□□□ 0.31
MRPL55-209ENST00000366735 BRCA1P38398 1863 aaKnown RBP16.97■□□□□ 0.31
MRPL55-209ENST00000366735 KIAA1551Q9HCM1 1747 aa16.96■□□□□ 0.31
MRPL55-209ENST00000366735 ERVV-2B6SEH9 535 aa16.96■□□□□ 0.31
MRPL55-209ENST00000366735 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
MRPL55-209ENST00000366735 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
MRPL55-209ENST00000366735 DCAF5Q96JK2 942 aa16.96■□□□□ 0.31
MRPL55-209ENST00000366735 GPBP1L1Q9HC44 474 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-209ENST00000366735 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
MRPL55-209ENST00000366735 ARFGEF1Q9Y6D6 1849 aa16.95■□□□□ 0.3
MRPL55-209ENST00000366735 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
MRPL55-209ENST00000366735 ADCY9O60503 1353 aa16.94■□□□□ 0.3
MRPL55-209ENST00000366735 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
MRPL55-209ENST00000366735 TJP1Q07157 1748 aa16.93■□□□□ 0.3
MRPL55-209ENST00000366735 ITPK1Q13572 414 aa16.93■□□□□ 0.3
MRPL55-209ENST00000366735 C1orf141Q5JVX7 400 aa16.93■□□□□ 0.3
MRPL55-209ENST00000366735 ZNF530Q6P9A1 599 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-209ENST00000366735 AMIGO3Q86WK7 504 aa16.93■□□□□ 0.3
MRPL55-209ENST00000366735 PANK3Q9H999 370 aa16.93■□□□□ 0.3
MRPL55-209ENST00000366735 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
MRPL55-209ENST00000366735 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
MRPL55-209ENST00000366735 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
MRPL55-209ENST00000366735 CNTNAP4Q9C0A0 1308 aa16.92■□□□□ 0.3
MRPL55-209ENST00000366735 KDM6AO15550 1401 aaPredicted RBP16.91■□□□□ 0.3
MRPL55-209ENST00000366735 MMP10P09238 476 aa16.91■□□□□ 0.3
MRPL55-209ENST00000366735 CABP4P57796 275 aa16.91■□□□□ 0.3
MRPL55-209ENST00000366735 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
MRPL55-209ENST00000366735 NLGN1Q8N2Q7 840 aa16.91■□□□□ 0.3
MRPL55-209ENST00000366735 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
MRPL55-209ENST00000366735 KNSTRNQ9Y448 316 aa16.9■□□□□ 0.3
MRPL55-209ENST00000366735 C10orf71Q711Q0 1435 aa16.89■□□□□ 0.29
MRPL55-209ENST00000366735 PXDNLA1KZ92 1463 aa16.89■□□□□ 0.29
MRPL55-209ENST00000366735 RFC4P35249 363 aa16.89■□□□□ 0.29
MRPL55-209ENST00000366735 SMIM5Q71RC9 77 aa16.89■□□□□ 0.29
MRPL55-209ENST00000366735 CCDC87Q9NVE4 849 aa16.89■□□□□ 0.29
MRPL55-209ENST00000366735 MTHFSP49914 203 aa16.88■□□□□ 0.29
MRPL55-209ENST00000366735 TGFB2P61812 414 aa16.88■□□□□ 0.29
MRPL55-209ENST00000366735 PARP3Q9Y6F1 533 aa16.87■□□□□ 0.29
MRPL55-209ENST00000366735 RPS6KA4O75676 772 aa16.86■□□□□ 0.29
MRPL55-209ENST00000366735 PLCB2Q00722 1185 aa16.86■□□□□ 0.29
MRPL55-209ENST00000366735 ZNF526Q8TF50 670 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-209ENST00000366735 WWC3Q9ULE0 1092 aa16.86■□□□□ 0.29
MRPL55-209ENST00000366735 SULT6B1Q6IMI4 303 aa16.85■□□□□ 0.29
MRPL55-209ENST00000366735 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
MRPL55-209ENST00000366735 MRC1P22897 1456 aa16.84■□□□□ 0.29
MRPL55-209ENST00000366735 GYS1P13807 737 aa16.83■□□□□ 0.28
MRPL55-209ENST00000366735 AFDNP55196 1824 aaKnown RBP16.83■□□□□ 0.28
MRPL55-209ENST00000366735 AEBP1Q8IUX7 1158 aa16.83■□□□□ 0.28
MRPL55-209ENST00000366735 UBR2Q8IWV8 1755 aa16.83■□□□□ 0.28
MRPL55-209ENST00000366735 SLC4A9Q96Q91 983 aa16.83■□□□□ 0.28
MRPL55-209ENST00000366735 ADAMTS7Q9UKP4 1686 aa16.83■□□□□ 0.28
MRPL55-209ENST00000366735 BCS1LQ9Y276 419 aa16.83■□□□□ 0.28
MRPL55-209ENST00000366735 DLEC1Q9Y238 1755 aa16.82■□□□□ 0.28
MRPL55-209ENST00000366735 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
MRPL55-209ENST00000366735 CRKLP46109 303 aaKnown RBP16.82■□□□□ 0.28
MRPL55-209ENST00000366735 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
MRPL55-209ENST00000366735 HSPA6P17066 643 aa16.81■□□□□ 0.28
MRPL55-209ENST00000366735 NFATC2IPQ8NCF5 419 aa16.81■□□□□ 0.28
MRPL55-209ENST00000366735 TNRC6CQ9HCJ0 1690 aaKnown RBP16.81■□□□□ 0.28
MRPL55-209ENST00000366735 SBF1O95248 1867 aa16.8■□□□□ 0.28
MRPL55-209ENST00000366735 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
MRPL55-209ENST00000366735 FCHSD2O94868 740 aa16.79■□□□□ 0.28
MRPL55-209ENST00000366735 IL13P35225 146 aa16.79■□□□□ 0.28
MRPL55-209ENST00000366735 A0A0G2JLW4 131 aa16.78■□□□□ 0.28
MRPL55-209ENST00000366735 SLC52A2Q9HAB3 445 aa16.78■□□□□ 0.28
MRPL55-209ENST00000366735 NRXN2Q9P2S2 1712 aa16.78■□□□□ 0.28
MRPL55-209ENST00000366735 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.28
MRPL55-209ENST00000366735 ZPR1O75312 459 aa16.77■□□□□ 0.28
MRPL55-209ENST00000366735 DPEP1P16444 411 aa16.77■□□□□ 0.28
MRPL55-209ENST00000366735 ARHGAP27Q6ZUM4 889 aa16.77■□□□□ 0.28
MRPL55-209ENST00000366735 PIM2Q9P1W9 311 aa16.77■□□□□ 0.28
MRPL55-209ENST00000366735 KCPQ6ZWJ8 1503 aa16.76■□□□□ 0.27
MRPL55-209ENST00000366735 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms