RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 PDIA4P13667 645 aaKnown RBP8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 C6orf118Q5T5N4 469 aa8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 LINC00528Q8N1L1 170 aa8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 INSM2Q96T92 566 aaPredicted RBP8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 ESYT1Q9BSJ8 1104 aa8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 TSEN34Q9BSV6 310 aaKnown RBP8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 DACH1Q9UI36 760 aa8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 USTQ9Y2C2 406 aa8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 HRH3Q9Y5N1 445 aa8.04□□□□□ -1.12
RNU6-560P-201ENST00000364007 BACH1O14867 736 aa8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 CENPCQ03188 943 aa8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 CLN3Q13286 438 aa8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 LAPTM4AQ15012 233 aa8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 ESCO1Q5FWF5 840 aa8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 MRPL14Q6P1L8 145 aaKnown RBP8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 TRIM46Q7Z4K8 759 aa8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 PRIMPOLQ96LW4 560 aa8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 SLC4A9Q96Q91 983 aa8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 TRAIPQ9BWF2 469 aa8.03□□□□□ -1.12
RNU6-560P-201ENST00000364007 M0R2N6 131 aa8.02□□□□□ -1.13
RNU6-560P-201ENST00000364007 SPINT1O43278 529 aa8.02□□□□□ -1.13
RNU6-560P-201ENST00000364007 BMP2P12643 396 aa8.02□□□□□ -1.13
RNU6-560P-201ENST00000364007 SMTNP53814 917 aa8.02□□□□□ -1.13
RNU6-560P-201ENST00000364007 CTC1Q2NKJ3 1217 aa8.02□□□□□ -1.13
RNU6-560P-201ENST00000364007 TBCELQ5QJ74 424 aa8.02□□□□□ -1.13
RNU6-560P-201ENST00000364007 NLRP3Q96P20 1036 aa8.02□□□□□ -1.13
RNU6-560P-201ENST00000364007 PURBQ96QR8 312 aaKnown RBP8.02□□□□□ -1.13
RNU6-560P-201ENST00000364007 AAASQ9NRG9 546 aa8.02□□□□□ -1.13
RNU6-560P-201ENST00000364007 PRMT3O60678 531 aa8.01□□□□□ -1.13
RNU6-560P-201ENST00000364007 UPP2O95045 317 aa8.01□□□□□ -1.13
RNU6-560P-201ENST00000364007 CTSOP43234 321 aaPredicted RBP8.01□□□□□ -1.13
RNU6-560P-201ENST00000364007 EPHA4P54764 986 aa8.01□□□□□ -1.13
RNU6-560P-201ENST00000364007 SWI5Q1ZZU3 235 aa8.01□□□□□ -1.13
RNU6-560P-201ENST00000364007 CLP1Q92989 425 aaKnown RBP8.01□□□□□ -1.13
RNU6-560P-201ENST00000364007 FHDC1Q9C0D6 1143 aaPredicted RBP8.01□□□□□ -1.13
RNU6-560P-201ENST00000364007 USP3Q9Y6I4 520 aa8.01□□□□□ -1.13
RNU6-560P-201ENST00000364007 A6NJY4 79 aa8□□□□□ -1.13
RNU6-560P-201ENST00000364007 MTFR1Q15390 333 aa8□□□□□ -1.13
RNU6-560P-201ENST00000364007 TLR1Q15399 786 aa8□□□□□ -1.13
RNU6-560P-201ENST00000364007 CRIPAKQ8N1N5 446 aa8□□□□□ -1.13
RNU6-560P-201ENST00000364007 ZFP42Q96MM3 310 aa8□□□□□ -1.13
RNU6-560P-201ENST00000364007 SCNN1AP37088 669 aa7.99□□□□□ -1.13
RNU6-560P-201ENST00000364007 PDE4CQ08493 712 aa7.99□□□□□ -1.13
RNU6-560P-201ENST00000364007 FOXD4L5Q5VV16 416 aaPredicted RBP7.99□□□□□ -1.13
RNU6-560P-201ENST00000364007 SCG3Q8WXD2 468 aaKnown RBP7.99□□□□□ -1.13
RNU6-560P-201ENST00000364007 TSPAN10Q9H1Z9 355 aaPredicted RBP7.99□□□□□ -1.13
RNU6-560P-201ENST00000364007 POLMQ9NP87 494 aaPredicted RBP7.99□□□□□ -1.13
RNU6-560P-201ENST00000364007 SCHIP1Q9P0W5 487 aaPredicted RBP7.99□□□□□ -1.13
RNU6-560P-201ENST00000364007 ATAD2Q6PL18 1390 aa7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 C21orf2O43822 256 aa7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 WEE1P30291 646 aa7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 RNF144AP50876 292 aaPredicted RBP7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 FOXK2Q01167 660 aa7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 SCARF1Q14162 830 aa7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 OCLNQ16625 522 aa7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 PHLDB3Q6NSJ2 640 aa7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 SLC9A9Q8IVB4 645 aa7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 ZSCAN10Q96SZ4 725 aaPredicted RBP7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 GRIP2Q9C0E4 1043 aa7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 IQSEC3Q9UPP2 1182 aaPredicted RBP7.98□□□□□ -1.13
RNU6-560P-201ENST00000364007 FIGNL2A6NMB9 653 aa7.97□□□□□ -1.13
RNU6-560P-201ENST00000364007 ATP2B4P23634 1241 aa7.97□□□□□ -1.13
RNU6-560P-201ENST00000364007 SSFA2P28290 1259 aa7.97□□□□□ -1.13
RNU6-560P-201ENST00000364007 ATP13A2Q9NQ11 1180 aa7.97□□□□□ -1.13
RNU6-560P-201ENST00000364007 CDK2AP1O14519 115 aa7.96□□□□□ -1.14
RNU6-560P-201ENST00000364007 LCE2BO14633 110 aa7.96□□□□□ -1.14
RNU6-560P-201ENST00000364007 SLC27A3Q5K4L6 730 aa7.96□□□□□ -1.14
RNU6-560P-201ENST00000364007 AEBP1Q8IUX7 1158 aa7.96□□□□□ -1.14
RNU6-560P-201ENST00000364007 CHMP7Q8WUX9 453 aaPredicted RBP7.96□□□□□ -1.14
RNU6-560P-201ENST00000364007 GPC1P35052 558 aa7.95□□□□□ -1.14
RNU6-560P-201ENST00000364007 Q6ZNB5 142 aa7.95□□□□□ -1.14
RNU6-560P-201ENST00000364007 CAPN12Q6ZSI9 719 aa7.95□□□□□ -1.14
RNU6-560P-201ENST00000364007 PRICKLE2Q7Z3G6 844 aa7.95□□□□□ -1.14
RNU6-560P-201ENST00000364007 PPARGC1BQ86YN6 1023 aaKnown RBP7.95□□□□□ -1.14
RNU6-560P-201ENST00000364007 RNF217Q8TC41 542 aa7.95□□□□□ -1.14
RNU6-560P-201ENST00000364007 CXXC1Q9P0U4 656 aaPredicted RBP7.95□□□□□ -1.14
RNU6-560P-201ENST00000364007 SOS2Q07890 1332 aaPredicted RBP7.95□□□□□ -1.14
RNU6-560P-201ENST00000364007 TTLL8A6PVC2 850 aa7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 PPP1R12BO60237 982 aaPredicted RBP7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 IGFBP4P22692 258 aa7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 POU4F2Q12837 409 aa7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 FKBP5Q13451 457 aaPredicted RBP7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 TMEM214Q6NUQ4 689 aaKnown RBP7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 ZNF295-AS1Q8N0V1 137 aa7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 ZDHHC1Q8WTX9 485 aa7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 CABP1Q9NZU7 370 aa7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 PARP3Q9Y6F1 533 aa7.94□□□□□ -1.14
RNU6-560P-201ENST00000364007 SOBPA7XYQ1 873 aa7.93□□□□□ -1.14
RNU6-560P-201ENST00000364007 BRD1O95696 1058 aa7.93□□□□□ -1.14
RNU6-560P-201ENST00000364007 RHOQP17081 205 aa7.93□□□□□ -1.14
RNU6-560P-201ENST00000364007 PHKA2P46019 1235 aa7.93□□□□□ -1.14
RNU6-560P-201ENST00000364007 SH3PXD2AQ5TCZ1 1133 aa7.93□□□□□ -1.14
RNU6-560P-201ENST00000364007 MKNK1Q9BUB5 465 aa7.93□□□□□ -1.14
RNU6-560P-201ENST00000364007 DNMT3LQ9UJW3 386 aa7.93□□□□□ -1.14
RNU6-560P-201ENST00000364007 C4orf17Q53FE4 359 aa7.92□□□□□ -1.14
RNU6-560P-201ENST00000364007 LYSMD3Q7Z3D4 306 aa7.92□□□□□ -1.14
RNU6-560P-201ENST00000364007 RHBDD1Q8TEB9 315 aa7.92□□□□□ -1.14
RNU6-560P-201ENST00000364007 SPATA31C2B4DYI2 1134 aa7.91□□□□□ -1.14
RNU6-560P-201ENST00000364007 GTF2E1P29083 439 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms