RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 C1orf141Q5JVX7 400 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 SLC27A3Q5K4L6 730 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 MSL1Q68DK7 614 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 LINC00116Q8NCU8 138 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 PHACTR3Q96KR7 559 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 SLC4A9Q96Q91 983 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 RBM42Q9BTD8 480 aaKnown RBP4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 RSPH6AQ9H0K4 717 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 SPON1Q9HCB6 807 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 ATG3Q9NT62 314 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 TFCP2L1Q9NZI6 479 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 KDM3BQ7LBC6 1761 aa4.68□□□□□ -1.66
RNU4-35P-201ENST00000362588 PLEKHG2Q9H7P9 1386 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 LOC102724428A0A0B4J2F2 783 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 RNMTO43148 476 aaKnown RBP4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 MSH5O43196 834 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 PTCD1O75127 700 aaKnown RBP4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 U2AF1L5P0DN76 240 aaPredicted RBP4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 ATP6V1AP38606 617 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 PTGER2P43116 358 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 SIK1P57059 783 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 CABP4P57796 275 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 U2AF1Q01081 240 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 SLC39A6Q13433 755 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 AKAP4Q5JQC9 854 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 COL23A1Q86Y22 540 aaPredicted RBP4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 KLHL34Q8N239 644 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 NFATC2IPQ8NCF5 419 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 SMARCC1Q92922 1105 aaPredicted RBP4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 DCAF5Q96JK2 942 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 CFAP53Q96M91 514 aa4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 PPP1R1BQ9UD71 204 aaPredicted RBP4.67□□□□□ -1.66
RNU4-35P-201ENST00000362588 MAP3K5Q99683 1374 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 LAMB4A4D0S4 1761 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 N4BP2Q86UW6 1770 aaPredicted RBP4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 ERVV-2B6SEH9 535 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 GNPATO15228 680 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 HSP90AB1P08238 724 aaKnown RBP4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 DCTN1Q14203 1278 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 AK7Q96M32 723 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 SGIP1Q9BQI5 828 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 MTFR1LQ9H019 292 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 SLC52A2Q9HAB3 445 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 AFDNP55196 1824 aaKnown RBP4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 KIAA1551Q9HCM1 1747 aa4.66□□□□□ -1.66
RNU4-35P-201ENST00000362588 CACNA1SQ13698 1873 aa4.65□□□□□ -1.66
RNU4-35P-201ENST00000362588 SENP3-EIF4A1A0A087X0R7 540 aa4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 KCNQ3O43525 872 aa4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 ZEB1P37275 1124 aaPredicted RBP4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 MCM10Q7L590 875 aa4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 DNAJC10Q8IXB1 793 aa4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 IL17REQ8NFR9 667 aa4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 FHDC1Q9C0D6 1143 aaPredicted RBP4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 NUDCQ9Y266 331 aa4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 CHD4Q14839 1912 aa4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 MYBBP1AQ9BQG0 1328 aaKnown RBP4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 BCORQ6W2J9 1755 aa4.65□□□□□ -1.67
RNU4-35P-201ENST00000362588 SCN7AQ01118 1682 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 GNAT3A8MTJ3 354 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 CRKLP46109 303 aaKnown RBP4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 PIP4K2AP48426 406 aaPredicted RBP4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 CCDC184Q52MB2 194 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 CCDC146Q8IYE0 955 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 NLGN2Q8NFZ4 835 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 GAS2L2Q8NHY3 880 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 ARXQ96QS3 562 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 THUMPD2Q9BTF0 503 aaKnown RBP4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 PRKRIP1Q9H875 184 aaPredicted RBP4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 WWC3Q9ULE0 1092 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 RRP7AQ9Y3A4 280 aaKnown RBP4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 KIF13BQ9NQT8 1826 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 BRCA1P38398 1863 aaKnown RBP4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 CEMIPQ8WUJ3 1361 aa4.64□□□□□ -1.67
RNU4-35P-201ENST00000362588 ANKRD31Q8N7Z5 1873 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 PRAMEF22A3QJZ6 481 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 ZNF316A6NFI3 1004 aaPredicted RBP4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 FCHSD2O94868 740 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 TEFQ10587 303 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 RALBP1Q15311 655 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 ZNF496Q96IT1 587 aaPredicted RBP4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 PLEKHF1Q96S99 279 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 SYT17Q9BSW7 474 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 MIS18AQ9NYP9 233 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 SRP68Q9UHB9 627 aaKnown RBP4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 ZBTB1Q9Y2K1 713 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 CNTNAP4Q9C0A0 1308 aa4.63□□□□□ -1.67
RNU4-35P-201ENST00000362588 NUP98P52948 1817 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 BTBD11A6QL63 1104 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 CYP19A1P11511 503 aaPredicted RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 CANXP27824 592 aaKnown RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 SSFA2P28290 1259 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 POLD1P28340 1107 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 NEUROD2Q15784 382 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 NFE2L2Q16236 605 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 INTS5Q6P9B9 1019 aaKnown RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 ZNF790Q6PG37 636 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 PELP1Q8IZL8 1130 aaKnown RBP4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 TTC5Q8N0Z6 440 aa4.62□□□□□ -1.67
RNU4-35P-201ENST00000362588 SLC16A10Q8TF71 515 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms