RNA–Protein interactions for RNA: ENST00000361720.9

GPATCH3-201, Transcript of G-patch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH3, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-201ENST00000361720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.66■■□□□ 1.38
GPATCH3-201ENST00000361720 SCN11AQ9UI33 1791 aa23.65■■□□□ 1.38
GPATCH3-201ENST00000361720 RNMTO43148 476 aaKnown RBP23.65■■□□□ 1.38
GPATCH3-201ENST00000361720 CALD1Q05682 793 aaKnown RBP23.65■■□□□ 1.38
GPATCH3-201ENST00000361720 AAMPQ13685 434 aa23.65■■□□□ 1.38
GPATCH3-201ENST00000361720 ADAMTS7Q9UKP4 1686 aa23.65■■□□□ 1.38
GPATCH3-201ENST00000361720 GNAI1P63096 354 aa23.65■■□□□ 1.38
GPATCH3-201ENST00000361720 USP21Q9UK80 565 aa23.65■■□□□ 1.38
GPATCH3-201ENST00000361720 KRT24Q2M2I5 525 aa23.63■■□□□ 1.37
GPATCH3-201ENST00000361720 DDX54Q8TDD1 881 aaKnown RBP23.63■■□□□ 1.37
GPATCH3-201ENST00000361720 AFF2P51816 1311 aa23.63■■□□□ 1.37
GPATCH3-201ENST00000361720 CHL1O00533 1208 aa23.63■■□□□ 1.37
GPATCH3-201ENST00000361720 IFNL2Q8IZJ0 200 aa23.63■■□□□ 1.37
GPATCH3-201ENST00000361720 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.62■■□□□ 1.37
GPATCH3-201ENST00000361720 TSPYL6Q8N831 410 aa23.62■■□□□ 1.37
GPATCH3-201ENST00000361720 CLUAP1Q96AJ1 413 aa23.62■■□□□ 1.37
GPATCH3-201ENST00000361720 SIPA1L3O60292 1781 aaPredicted RBP23.61■■□□□ 1.37
GPATCH3-201ENST00000361720 PLEKHG2Q9H7P9 1386 aa23.61■■□□□ 1.37
GPATCH3-201ENST00000361720 RARSP54136 660 aaKnown RBP23.6■■□□□ 1.37
GPATCH3-201ENST00000361720 PCDH11XQ9BZA7 1347 aa23.6■■□□□ 1.37
GPATCH3-201ENST00000361720 PCDH11YQ9BZA8 1340 aa23.6■■□□□ 1.37
GPATCH3-201ENST00000361720 ELL2O00472 640 aaPredicted RBP23.6■■□□□ 1.37
GPATCH3-201ENST00000361720 CANXP27824 592 aaKnown RBP23.6■■□□□ 1.37
GPATCH3-201ENST00000361720 VPS72Q15906 364 aa23.6■■□□□ 1.37
GPATCH3-201ENST00000361720 TSPYL4Q9UJ04 414 aa23.6■■□□□ 1.37
GPATCH3-201ENST00000361720 C8orf58Q8NAV2 365 aa23.59■■□□□ 1.37
GPATCH3-201ENST00000361720 IGHDP01880 384 aa23.59■■□□□ 1.37
GPATCH3-201ENST00000361720 RGS3P49796 1198 aa23.59■■□□□ 1.37
GPATCH3-201ENST00000361720 FAM98CQ17RN3 349 aaKnown RBP23.58■■□□□ 1.37
GPATCH3-201ENST00000361720 TOGARAM1Q9Y4F4 1720 aa23.58■■□□□ 1.37
GPATCH3-201ENST00000361720 KCNQ3O43525 872 aa23.57■■□□□ 1.36
GPATCH3-201ENST00000361720 TAF7Q15545 349 aaPredicted RBP23.57■■□□□ 1.36
GPATCH3-201ENST00000361720 FBXO41Q8TF61 875 aa23.57■■□□□ 1.36
GPATCH3-201ENST00000361720 BCL2L13Q9BXK5 485 aa23.57■■□□□ 1.36
GPATCH3-201ENST00000361720 KDM3BQ7LBC6 1761 aa23.57■■□□□ 1.36
GPATCH3-201ENST00000361720 TEFQ10587 303 aa23.57■■□□□ 1.36
GPATCH3-201ENST00000361720 PANK1Q8TE04 598 aa23.56■■□□□ 1.36
GPATCH3-201ENST00000361720 THRAP3Q9Y2W1 955 aaKnown RBP23.56■■□□□ 1.36
GPATCH3-201ENST00000361720 GLI3P10071 1580 aa23.56■■□□□ 1.36
GPATCH3-201ENST00000361720 COG6Q9Y2V7 657 aa23.56■■□□□ 1.36
GPATCH3-201ENST00000361720 TNS2Q63HR2 1409 aa23.55■■□□□ 1.36
GPATCH3-201ENST00000361720 DCAF5Q96JK2 942 aa23.54■■□□□ 1.36
GPATCH3-201ENST00000361720 BARGINQ6ZT62 677 aa23.54■■□□□ 1.36
GPATCH3-201ENST00000361720 NFATC2IPQ8NCF5 419 aa23.54■■□□□ 1.36
GPATCH3-201ENST00000361720 KAT6BQ8WYB5 2073 aa23.53■■□□□ 1.36
GPATCH3-201ENST00000361720 EXOC5O00471 708 aa23.53■■□□□ 1.36
GPATCH3-201ENST00000361720 SLC52A2Q9HAB3 445 aa23.53■■□□□ 1.36
GPATCH3-201ENST00000361720 DAXXQ9UER7 740 aaPredicted RBP23.53■■□□□ 1.36
GPATCH3-201ENST00000361720 MRC1P22897 1456 aa23.53■■□□□ 1.36
GPATCH3-201ENST00000361720 BTBD11A6QL63 1104 aa23.52■■□□□ 1.36
GPATCH3-201ENST00000361720 VAMP4O75379 141 aa23.52■■□□□ 1.36
GPATCH3-201ENST00000361720 ATRNO75882 1429 aa23.52■■□□□ 1.36
GPATCH3-201ENST00000361720 NKX1-1Q15270 411 aaPredicted RBP23.51■■□□□ 1.35
GPATCH3-201ENST00000361720 TWISTNBQ3B726 338 aaPredicted RBP23.51■■□□□ 1.35
GPATCH3-201ENST00000361720 CT47B1P0C2W7 299 aaPredicted RBP23.51■■□□□ 1.35
GPATCH3-201ENST00000361720 SLC39A6Q13433 755 aa23.51■■□□□ 1.35
GPATCH3-201ENST00000361720 DDB1Q16531 1140 aa23.51■■□□□ 1.35
GPATCH3-201ENST00000361720 HSP90AB1P08238 724 aaKnown RBP23.5■■□□□ 1.35
GPATCH3-201ENST00000361720 FRAT1Q92837 279 aaPredicted RBP23.5■■□□□ 1.35
GPATCH3-201ENST00000361720 SSH1Q8WYL5 1049 aa23.5■■□□□ 1.35
GPATCH3-201ENST00000361720 GJD4Q96KN9 370 aaPredicted RBP23.49■■□□□ 1.35
GPATCH3-201ENST00000361720 CDCA7Q9BWT1 371 aaPredicted RBP23.48■■□□□ 1.35
GPATCH3-201ENST00000361720 ITGB4P16144 1822 aa23.48■■□□□ 1.35
GPATCH3-201ENST00000361720 THSD7AQ9UPZ6 1657 aa23.48■■□□□ 1.35
GPATCH3-201ENST00000361720 A0A0G2JS52 829 aa23.48■■□□□ 1.35
GPATCH3-201ENST00000361720 CABP4P57796 275 aa23.48■■□□□ 1.35
GPATCH3-201ENST00000361720 MARCH10Q8NA82 808 aaPredicted RBP23.48■■□□□ 1.35
GPATCH3-201ENST00000361720 QTRT2Q9H974 415 aaKnown RBP23.47■■□□□ 1.35
GPATCH3-201ENST00000361720 TRPC5Q9UL62 973 aaPredicted RBP23.47■■□□□ 1.35
GPATCH3-201ENST00000361720 DOT1LQ8TEK3 1739 aa23.46■■□□□ 1.35
GPATCH3-201ENST00000361720 EIF4A1P60842 406 aaKnown RBP23.46■■□□□ 1.35
GPATCH3-201ENST00000361720 BABAM1Q9NWV8 329 aa23.45■■□□□ 1.35
GPATCH3-201ENST00000361720 TNNQ9UQP3 1299 aa23.45■■□□□ 1.35
GPATCH3-201ENST00000361720 RLBP1P12271 317 aa23.45■■□□□ 1.34
GPATCH3-201ENST00000361720 SMC4Q9NTJ3 1288 aa23.45■■□□□ 1.34
GPATCH3-201ENST00000361720 PRAMEF22A3QJZ6 481 aa23.44■■□□□ 1.34
GPATCH3-201ENST00000361720 NECTIN2Q92692 538 aa23.44■■□□□ 1.34
GPATCH3-201ENST00000361720 ERVV-2B6SEH9 535 aa23.42■■□□□ 1.34
GPATCH3-201ENST00000361720 ZNF790Q6PG37 636 aa23.42■■□□□ 1.34
GPATCH3-201ENST00000361720 PCDHB15Q9Y5E8 787 aa23.42■■□□□ 1.34
GPATCH3-201ENST00000361720 SLC4A3P48751 1232 aa23.42■■□□□ 1.34
GPATCH3-201ENST00000361720 C5P01031 1676 aa23.42■■□□□ 1.34
GPATCH3-201ENST00000361720 NFKBIBQ15653 356 aa23.41■■□□□ 1.34
GPATCH3-201ENST00000361720 FAM182BQ5T319 152 aa23.41■■□□□ 1.34
GPATCH3-201ENST00000361720 PAPPAQ13219 1627 aa23.41■■□□□ 1.34
GPATCH3-201ENST00000361720 ACSBG1Q96GR2 724 aa23.41■■□□□ 1.34
GPATCH3-201ENST00000361720 RWDD1Q9H446 243 aaPredicted RBP23.41■■□□□ 1.34
GPATCH3-201ENST00000361720 MVPQ14764 893 aaKnown RBP23.4■■□□□ 1.34
GPATCH3-201ENST00000361720 ZKSCAN2Q63HK3 967 aa23.4■■□□□ 1.34
GPATCH3-201ENST00000361720 PIGBQ92521 554 aa23.39■■□□□ 1.34
GPATCH3-201ENST00000361720 MRPL50Q8N5N7 158 aaKnown RBP23.39■■□□□ 1.33
GPATCH3-201ENST00000361720 SYTL4Q96C24 671 aaPredicted RBP23.39■■□□□ 1.33
GPATCH3-201ENST00000361720 ZNF496Q96IT1 587 aaPredicted RBP23.39■■□□□ 1.33
GPATCH3-201ENST00000361720 EP400Q96L91 3159 aa23.38■■□□□ 1.33
GPATCH3-201ENST00000361720 TMOD3Q9NYL9 352 aa23.38■■□□□ 1.33
GPATCH3-201ENST00000361720 UBR2Q8IWV8 1755 aa23.38■■□□□ 1.33
GPATCH3-201ENST00000361720 PRIM1P49642 420 aaKnown RBP23.38■■□□□ 1.33
GPATCH3-201ENST00000361720 ALDH1L2Q3SY69 923 aa23.38■■□□□ 1.33
GPATCH3-201ENST00000361720 HEG1Q9ULI3 1381 aa23.37■■□□□ 1.33
GPATCH3-201ENST00000361720 SEPT12Q8IYM1 358 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms