RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 IQGAP1P46940 1657 aa15.26■□□□□ 0.03
VAMP1-201ENST00000361716 CYP2E1P05181 493 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-201ENST00000361716 PTGS1P23219 599 aa15.26■□□□□ 0.03
VAMP1-201ENST00000361716 TNNT3P45378 269 aaPredicted RBP15.26■□□□□ 0.03
VAMP1-201ENST00000361716 NFE2L2Q16236 605 aa15.26■□□□□ 0.03
VAMP1-201ENST00000361716 TTC22Q5TAA0 569 aa15.26■□□□□ 0.03
VAMP1-201ENST00000361716 MRPL50Q8N5N7 158 aaKnown RBP15.26■□□□□ 0.03
VAMP1-201ENST00000361716 MEIS3Q99687 375 aa15.26■□□□□ 0.03
VAMP1-201ENST00000361716 SIGLEC1Q9BZZ2 1709 aa15.26■□□□□ 0.03
VAMP1-201ENST00000361716 CAMK4Q16566 473 aa15.26■□□□□ 0.03
VAMP1-201ENST00000361716 KIAA1210Q9ULL0 1709 aa15.25■□□□□ 0.03
VAMP1-201ENST00000361716 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-201ENST00000361716 IL1RAPL2Q9NP60 686 aa15.25■□□□□ 0.03
VAMP1-201ENST00000361716 GOLGA6L6A8MZA4 724 aa15.25■□□□□ 0.03
VAMP1-201ENST00000361716 FCHSD2O94868 740 aa15.25■□□□□ 0.03
VAMP1-201ENST00000361716 TPD52L1Q16890 204 aaPredicted RBP15.25■□□□□ 0.03
VAMP1-201ENST00000361716 PLEKHF1Q96S99 279 aa15.25■□□□□ 0.03
VAMP1-201ENST00000361716 RBM33Q96EV2 1170 aaKnown RBP15.24■□□□□ 0.03
VAMP1-201ENST00000361716 ZFP91Q96JP5 570 aaPredicted RBP15.24■□□□□ 0.03
VAMP1-201ENST00000361716 PPIP5K1Q6PFW1 1433 aa15.24■□□□□ 0.03
VAMP1-201ENST00000361716 ERC2O15083 957 aa15.24■□□□□ 0.03
VAMP1-201ENST00000361716 CCDC112Q8NEF3 446 aa15.24■□□□□ 0.03
VAMP1-201ENST00000361716 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
VAMP1-201ENST00000361716 SYNMO15061 1565 aa15.24■□□□□ 0.03
VAMP1-201ENST00000361716 KIF13AQ9H1H9 1805 aa15.24■□□□□ 0.03
VAMP1-201ENST00000361716 LRMPQ12912 555 aa15.23■□□□□ 0.03
VAMP1-201ENST00000361716 TNNT1P13805 278 aa15.23■□□□□ 0.03
VAMP1-201ENST00000361716 MCCP23508 829 aa15.23■□□□□ 0.03
VAMP1-201ENST00000361716 OS9Q13438 667 aaPredicted RBP15.23■□□□□ 0.03
VAMP1-201ENST00000361716 COG3Q96JB2 828 aa15.23■□□□□ 0.03
VAMP1-201ENST00000361716 OGFRQ9NZT2 677 aa15.23■□□□□ 0.03
VAMP1-201ENST00000361716 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
VAMP1-201ENST00000361716 ALDH1L2Q3SY69 923 aa15.23■□□□□ 0.03
VAMP1-201ENST00000361716 TXNDC2Q86VQ3 553 aa15.23■□□□□ 0.03
VAMP1-201ENST00000361716 CCDC66A2RUB6 948 aa15.22■□□□□ 0.03
VAMP1-201ENST00000361716 KDM4AO75164 1064 aa15.22■□□□□ 0.03
VAMP1-201ENST00000361716 PIK3C2BO00750 1634 aa15.22■□□□□ 0.03
VAMP1-201ENST00000361716 KIF1BO60333 1816 aa15.22■□□□□ 0.03
VAMP1-201ENST00000361716 IRX5P78411 483 aaPredicted RBP15.22■□□□□ 0.03
VAMP1-201ENST00000361716 CCDC183Q5T5S1 534 aa15.22■□□□□ 0.03
VAMP1-201ENST00000361716 TAF3Q5VWG9 929 aa15.22■□□□□ 0.03
VAMP1-201ENST00000361716 FAM184AQ8NB25 1140 aa15.22■□□□□ 0.03
VAMP1-201ENST00000361716 TRIM34Q9BYJ4 488 aa15.22■□□□□ 0.03
VAMP1-201ENST00000361716 CAMSAP1Q5T5Y3 1602 aa15.21■□□□□ 0.03
VAMP1-201ENST00000361716 CCDC186Q7Z3E2 898 aa15.21■□□□□ 0.03
VAMP1-201ENST00000361716 IPO4Q8TEX9 1081 aaKnown RBP15.21■□□□□ 0.03
VAMP1-201ENST00000361716 TRIM5Q9C035 493 aa15.21■□□□□ 0.03
VAMP1-201ENST00000361716 VPS37CA5D8V6 355 aaPredicted RBP15.21■□□□□ 0.03
VAMP1-201ENST00000361716 ZC3H13Q5T200 1668 aaKnown RBP15.21■□□□□ 0.03
VAMP1-201ENST00000361716 NUTM2GQ5VZR2 741 aa15.21■□□□□ 0.02
VAMP1-201ENST00000361716 SLC26A8Q96RN1 970 aa15.21■□□□□ 0.02
VAMP1-201ENST00000361716 ANKRD36BQ8N2N9 1353 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 ABCC3O15438 1527 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 CKAP2LQ8IYA6 745 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 FBXW7Q969H0 707 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 DNAJC5Q9H3Z4 198 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 ST7Q9NRC1 585 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 NRXN1Q9ULB1 1477 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 HMMRO75330 724 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 NCBP1Q09161 790 aaKnown RBP15.2■□□□□ 0.02
VAMP1-201ENST00000361716 TIGD1Q96MW7 591 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 ABCC11Q96J66 1382 aa15.2■□□□□ 0.02
VAMP1-201ENST00000361716 PALD1Q9ULE6 856 aa15.19■□□□□ 0.02
VAMP1-201ENST00000361716 GOLGA6L4A6NEF3 574 aa15.19■□□□□ 0.02
VAMP1-201ENST00000361716 ADGRB3O60242 1522 aa15.19■□□□□ 0.02
VAMP1-201ENST00000361716 BRD1O95696 1058 aa15.19■□□□□ 0.02
VAMP1-201ENST00000361716 EIF2S2P20042 333 aaKnown RBP15.19■□□□□ 0.02
VAMP1-201ENST00000361716 TRMT1Q9NXH9 659 aaKnown RBP15.19■□□□□ 0.02
VAMP1-201ENST00000361716 NUTM1Q86Y26 1132 aa15.18■□□□□ 0.02
VAMP1-201ENST00000361716 KIAA1524Q8TCG1 905 aa15.18■□□□□ 0.02
VAMP1-201ENST00000361716 TSPYL4Q9UJ04 414 aa15.18■□□□□ 0.02
VAMP1-201ENST00000361716 KCNF1Q9H3M0 494 aa15.18■□□□□ 0.02
VAMP1-201ENST00000361716 REREQ9P2R6 1566 aa15.18■□□□□ 0.02
VAMP1-201ENST00000361716 FEZ1Q99689 392 aa15.18■□□□□ 0.02
VAMP1-201ENST00000361716 NRBP1Q9UHY1 535 aa15.18■□□□□ 0.02
VAMP1-201ENST00000361716 GTF2F1P35269 517 aaKnown RBP eCLIP15.17■□□□□ 0.02
VAMP1-201ENST00000361716 LUZP1Q86V48 1076 aa15.17■□□□□ 0.02
VAMP1-201ENST00000361716 STK31Q9BXU1 1019 aa15.17■□□□□ 0.02
VAMP1-201ENST00000361716 SRCIN1Q9C0H9 1055 aa15.17■□□□□ 0.02
VAMP1-201ENST00000361716 PPLO60437 1756 aa15.17■□□□□ 0.02
VAMP1-201ENST00000361716 KDM5AP29375 1690 aaKnown RBP15.17■□□□□ 0.02
VAMP1-201ENST00000361716 WDR33Q9C0J8 1336 aaKnown RBP15.17■□□□□ 0.02
VAMP1-201ENST00000361716 MX1P20591 662 aa15.17■□□□□ 0.02
VAMP1-201ENST00000361716 FERMT3Q86UX7 667 aa15.17■□□□□ 0.02
VAMP1-201ENST00000361716 SYTL4Q96C24 671 aaPredicted RBP15.17■□□□□ 0.02
VAMP1-201ENST00000361716 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
VAMP1-201ENST00000361716 TMX1Q9H3N1 280 aa15.17■□□□□ 0.02
VAMP1-201ENST00000361716 MYOM2P54296 1465 aa15.17■□□□□ 0.02
VAMP1-201ENST00000361716 LMOD3Q0VAK6 560 aa15.16■□□□□ 0.02
VAMP1-201ENST00000361716 UVSSAQ2YD98 709 aa15.16■□□□□ 0.02
VAMP1-201ENST00000361716 FOXO3O43524 673 aa15.16■□□□□ 0.02
VAMP1-201ENST00000361716 GORABQ5T7V8 394 aa15.16■□□□□ 0.02
VAMP1-201ENST00000361716 GTF3C6Q969F1 213 aa15.16■□□□□ 0.02
VAMP1-201ENST00000361716 CCDC9Q9Y3X0 531 aaKnown RBP15.16■□□□□ 0.02
VAMP1-201ENST00000361716 POLR3GO15318 223 aaPredicted RBP15.15■□□□□ 0.02
VAMP1-201ENST00000361716 G2E3Q7L622 706 aa15.15■□□□□ 0.02
VAMP1-201ENST00000361716 AP5Z1O43299 807 aa15.15■□□□□ 0.02
VAMP1-201ENST00000361716 KRT222Q8N1A0 295 aa15.15■□□□□ 0.02
VAMP1-201ENST00000361716 DCTPP1Q9H773 170 aa15.15■□□□□ 0.02
VAMP1-201ENST00000361716 CPA1P15085 419 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms