RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 ADCY9O60503 1353 aa29.1■■■□□ 2.25
CD47-202ENST00000361309 GPBP1L1Q9HC44 474 aaPredicted RBP29.09■■■□□ 2.25
CD47-202ENST00000361309 ZNF831Q5JPB2 1677 aa29.09■■■□□ 2.25
CD47-202ENST00000361309 KIF13BQ9NQT8 1826 aa29.08■■■□□ 2.25
CD47-202ENST00000361309 COL5A3P25940 1745 aaPredicted RBP29.07■■■□□ 2.24
CD47-202ENST00000361309 PLEKHG2Q9H7P9 1386 aa29.07■■■□□ 2.24
CD47-202ENST00000361309 N4BP2Q86UW6 1770 aaPredicted RBP29.06■■■□□ 2.24
CD47-202ENST00000361309 KDRP35968 1356 aa29.06■■■□□ 2.24
CD47-202ENST00000361309 ZNF526Q8TF50 670 aaPredicted RBP29.06■■■□□ 2.24
CD47-202ENST00000361309 MMP10P09238 476 aa29.05■■■□□ 2.24
CD47-202ENST00000361309 KIAA1551Q9HCM1 1747 aa29.04■■■□□ 2.24
CD47-202ENST00000361309 ERVV-2B6SEH9 535 aa29.04■■■□□ 2.24
CD47-202ENST00000361309 SLC4A9Q96Q91 983 aa29.04■■■□□ 2.24
CD47-202ENST00000361309 RBM42Q9BTD8 480 aaKnown RBP29.04■■■□□ 2.24
CD47-202ENST00000361309 CLSPNQ9HAW4 1339 aa29.03■■■□□ 2.24
CD47-202ENST00000361309 MYH14Q7Z406 1995 aaKnown RBP29.03■■■□□ 2.24
CD47-202ENST00000361309 TRAPPC3LQ5T215 181 aa29.03■■■□□ 2.24
CD47-202ENST00000361309 DCAF5Q96JK2 942 aa29.03■■■□□ 2.24
CD47-202ENST00000361309 RTCBQ9Y3I0 505 aaKnown RBP29.03■■■□□ 2.24
CD47-202ENST00000361309 HSP90AB1P08238 724 aaKnown RBP29.02■■■□□ 2.24
CD47-202ENST00000361309 PLEKHO1Q53GL0 409 aaPredicted RBP29.02■■■□□ 2.24
CD47-202ENST00000361309 PCGF6Q9BYE7 350 aa29.02■■■□□ 2.24
CD47-202ENST00000361309 PANK3Q9H999 370 aa29.02■■■□□ 2.24
CD47-202ENST00000361309 CICQ96RK0 1608 aaPredicted RBP29.02■■■□□ 2.24
CD47-202ENST00000361309 PXDNLA1KZ92 1463 aa28.99■■■□□ 2.23
CD47-202ENST00000361309 HSPA5P11021 654 aaKnown RBP28.99■■■□□ 2.23
CD47-202ENST00000361309 EIF4G2P78344 907 aaKnown RBP eCLIP28.99■■■□□ 2.23
CD47-202ENST00000361309 ZNF530Q6P9A1 599 aaPredicted RBP28.99■■■□□ 2.23
CD47-202ENST00000361309 KDM6AO15550 1401 aaPredicted RBP28.99■■■□□ 2.23
CD47-202ENST00000361309 C4AP0C0L4 1744 aa28.98■■■□□ 2.23
CD47-202ENST00000361309 RC3H1Q5TC82 1133 aaKnown RBP28.98■■■□□ 2.23
CD47-202ENST00000361309 NLGN1Q8N2Q7 840 aa28.98■■■□□ 2.23
CD47-202ENST00000361309 ARHGEF1Q92888 912 aaKnown RBP28.98■■■□□ 2.23
CD47-202ENST00000361309 CABP4P57796 275 aa28.97■■■□□ 2.23
CD47-202ENST00000361309 CNTNAP4Q9C0A0 1308 aa28.96■■■□□ 2.23
CD47-202ENST00000361309 AMOTQ4VCS5 1084 aa28.96■■■□□ 2.23
CD47-202ENST00000361309 ADRA2BP18089 450 aa28.95■■■□□ 2.22
CD47-202ENST00000361309 BRCA1P38398 1863 aaKnown RBP28.95■■■□□ 2.22
CD47-202ENST00000361309 RPS6KA4O75676 772 aa28.94■■■□□ 2.22
CD47-202ENST00000361309 TGFB2P61812 414 aa28.94■■■□□ 2.22
CD47-202ENST00000361309 AEBP1Q8IUX7 1158 aa28.94■■■□□ 2.22
CD47-202ENST00000361309 C10orf71Q711Q0 1435 aa28.94■■■□□ 2.22
CD47-202ENST00000361309 A0A0G2JLW4 131 aa28.93■■■□□ 2.22
CD47-202ENST00000361309 GYS1P13807 737 aa28.93■■■□□ 2.22
CD47-202ENST00000361309 RFC4P35249 363 aa28.93■■■□□ 2.22
CD47-202ENST00000361309 MTHFSP49914 203 aa28.93■■■□□ 2.22
CD47-202ENST00000361309 MORC1Q86VD1 984 aa28.93■■■□□ 2.22
CD47-202ENST00000361309 C1orf141Q5JVX7 400 aa28.92■■■□□ 2.22
CD47-202ENST00000361309 BCS1LQ9Y276 419 aa28.92■■■□□ 2.22
CD47-202ENST00000361309 SCN11AQ9UI33 1791 aa28.92■■■□□ 2.22
CD47-202ENST00000361309 PTCD1O75127 700 aaKnown RBP28.91■■■□□ 2.22
CD47-202ENST00000361309 HSPA6P17066 643 aa28.91■■■□□ 2.22
CD47-202ENST00000361309 CCDC87Q9NVE4 849 aa28.9■■■□□ 2.22
CD47-202ENST00000361309 TJP1Q07157 1748 aa28.89■■■□□ 2.22
CD47-202ENST00000361309 NFATC2IPQ8NCF5 419 aa28.89■■■□□ 2.22
CD47-202ENST00000361309 PARP3Q9Y6F1 533 aa28.89■■■□□ 2.22
CD47-202ENST00000361309 VIRMAQ69YN4 1812 aaKnown RBP28.89■■■□□ 2.22
CD47-202ENST00000361309 KIF3CO14782 793 aa28.88■■■□□ 2.21
CD47-202ENST00000361309 SULT6B1Q6IMI4 303 aa28.88■■■□□ 2.21
CD47-202ENST00000361309 DPEP1P16444 411 aa28.87■■■□□ 2.21
CD47-202ENST00000361309 ARFGEF1Q9Y6D6 1849 aa28.87■■■□□ 2.21
CD47-202ENST00000361309 CRKLP46109 303 aaKnown RBP28.86■■■□□ 2.21
CD47-202ENST00000361309 ARHGAP27Q6ZUM4 889 aa28.84■■■□□ 2.21
CD47-202ENST00000361309 FCHSD2O94868 740 aa28.83■■■□□ 2.21
CD47-202ENST00000361309 IL13P35225 146 aa28.83■■■□□ 2.21
CD47-202ENST00000361309 SRP68Q9UHB9 627 aaKnown RBP28.83■■■□□ 2.21
CD47-202ENST00000361309 KNSTRNQ9Y448 316 aa28.83■■■□□ 2.21
CD47-202ENST00000361309 KCNA3P22001 575 aa28.81■■■□□ 2.2
CD47-202ENST00000361309 ADAMTS7Q9UKP4 1686 aa28.8■■■□□ 2.2
CD47-202ENST00000361309 USP42Q9H9J4 1324 aaKnown RBP28.79■■■□□ 2.2
CD47-202ENST00000361309 FKBP8Q14318 412 aa28.79■■■□□ 2.2
CD47-202ENST00000361309 IFFO2Q5TF58 517 aa28.79■■■□□ 2.2
CD47-202ENST00000361309 DDR1Q08345 913 aa28.77■■■□□ 2.2
CD47-202ENST00000361309 AKAP4Q5JQC9 854 aa28.77■■■□□ 2.2
CD47-202ENST00000361309 INTS5Q6P9B9 1019 aaKnown RBP28.77■■■□□ 2.2
CD47-202ENST00000361309 AMER1Q5JTC6 1135 aaPredicted RBP28.75■■■□□ 2.19
CD47-202ENST00000361309 LGR6Q9HBX8 967 aa28.75■■■□□ 2.19
CD47-202ENST00000361309 PIM2Q9P1W9 311 aa28.75■■■□□ 2.19
CD47-202ENST00000361309 DNAJC10Q8IXB1 793 aa28.74■■■□□ 2.19
CD47-202ENST00000361309 SLC52A2Q9HAB3 445 aa28.74■■■□□ 2.19
CD47-202ENST00000361309 SBF1O95248 1867 aa28.74■■■□□ 2.19
CD47-202ENST00000361309 AFDNP55196 1824 aaKnown RBP28.73■■■□□ 2.19
CD47-202ENST00000361309 NMRK2Q9NPI5 230 aa28.73■■■□□ 2.19
CD47-202ENST00000361309 TOMM70O94826 608 aa28.72■■■□□ 2.19
CD47-202ENST00000361309 C9orf131Q5VYM1 1079 aa28.72■■■□□ 2.19
CD47-202ENST00000361309 HMOX1P09601 288 aa28.71■■■□□ 2.19
CD47-202ENST00000361309 DALRD3Q5D0E6 543 aaKnown RBP28.71■■■□□ 2.19
CD47-202ENST00000361309 MRC1P22897 1456 aa28.71■■■□□ 2.19
CD47-202ENST00000361309 POLRMTO00411 1230 aaKnown RBP28.7■■■□□ 2.18
CD47-202ENST00000361309 RNMTO43148 476 aaKnown RBP28.7■■■□□ 2.18
CD47-202ENST00000361309 ZPR1O75312 459 aa28.7■■■□□ 2.18
CD47-202ENST00000361309 TM4SF1P30408 202 aa28.7■■■□□ 2.18
CD47-202ENST00000361309 SLC39A6Q13433 755 aa28.7■■■□□ 2.18
CD47-202ENST00000361309 USPL1Q5W0Q7 1092 aa28.7■■■□□ 2.18
CD47-202ENST00000361309 CCER1Q8TC90 406 aaPredicted RBP28.7■■■□□ 2.18
CD47-202ENST00000361309 CHRNA5P30532 468 aa28.69■■■□□ 2.18
CD47-202ENST00000361309 SOS1Q07889 1333 aaPredicted RBP28.69■■■□□ 2.18
CD47-202ENST00000361309 APLP1P51693 650 aa28.68■■■□□ 2.18
CD47-202ENST00000361309 KCPQ6ZWJ8 1503 aa28.68■■■□□ 2.18
CD47-202ENST00000361309 CYP19A1P11511 503 aaPredicted RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms