RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 TOGARAM1Q9Y4F4 1720 aa10.1□□□□□ -0.79
CCL28-201ENST00000361115 CNGB1Q14028 1251 aaPredicted RBP10.09□□□□□ -0.79
CCL28-201ENST00000361115 TMEM132AQ24JP5 1023 aa10.09□□□□□ -0.79
CCL28-201ENST00000361115 FAM182BQ5T319 152 aa10.09□□□□□ -0.79
CCL28-201ENST00000361115 COL5A3P25940 1745 aaPredicted RBP10.09□□□□□ -0.79
CCL28-201ENST00000361115 BRCA1P38398 1863 aaKnown RBP10.09□□□□□ -0.79
CCL28-201ENST00000361115 ROCK2O75116 1388 aaKnown RBP10.09□□□□□ -0.79
CCL28-201ENST00000361115 GSE1Q14687 1217 aa10.09□□□□□ -0.79
CCL28-201ENST00000361115 TGFB2P61812 414 aa10.09□□□□□ -0.79
CCL28-201ENST00000361115 BACH2Q9BYV9 841 aa10.09□□□□□ -0.79
CCL28-201ENST00000361115 ITGB4P16144 1822 aa10.08□□□□□ -0.8
CCL28-201ENST00000361115 ANKRD24Q8TF21 1146 aa10.08□□□□□ -0.8
CCL28-201ENST00000361115 PDZRN3Q9UPQ7 1066 aa10.08□□□□□ -0.8
CCL28-201ENST00000361115 DLEC1Q9Y238 1755 aa10.08□□□□□ -0.8
CCL28-201ENST00000361115 C4AP0C0L4 1744 aa10.08□□□□□ -0.8
CCL28-201ENST00000361115 INSRP06213 1382 aa10.07□□□□□ -0.8
CCL28-201ENST00000361115 KIF7Q2M1P5 1343 aa10.07□□□□□ -0.8
CCL28-201ENST00000361115 TCERG1O14776 1098 aaKnown RBP10.07□□□□□ -0.8
CCL28-201ENST00000361115 FGD1P98174 961 aa10.07□□□□□ -0.8
CCL28-201ENST00000361115 MAPK8IP2Q13387 824 aaPredicted RBP10.07□□□□□ -0.8
CCL28-201ENST00000361115 NKX1-1Q15270 411 aaPredicted RBP10.07□□□□□ -0.8
CCL28-201ENST00000361115 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
CCL28-201ENST00000361115 EXOC6Q8TAG9 804 aa10.07□□□□□ -0.8
CCL28-201ENST00000361115 FRAT1Q92837 279 aaPredicted RBP10.07□□□□□ -0.8
CCL28-201ENST00000361115 ATF5Q9Y2D1 282 aaPredicted RBP10.07□□□□□ -0.8
CCL28-201ENST00000361115 SLC4A2P04920 1241 aa10.06□□□□□ -0.8
CCL28-201ENST00000361115 ZNF827Q17R98 1081 aa10.06□□□□□ -0.8
CCL28-201ENST00000361115 JMYQ8N9B5 988 aa10.06□□□□□ -0.8
CCL28-201ENST00000361115 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
CCL28-201ENST00000361115 AXIN2Q9Y2T1 843 aa10.06□□□□□ -0.8
CCL28-201ENST00000361115 GPBP1L1Q9HC44 474 aaPredicted RBP10.06□□□□□ -0.8
CCL28-201ENST00000361115 CABP2Q9NPB3 220 aa10.06□□□□□ -0.8
CCL28-201ENST00000361115 NFKBIBQ15653 356 aa10.05□□□□□ -0.8
CCL28-201ENST00000361115 ZCRB1Q8TBF4 217 aaKnown RBP10.05□□□□□ -0.8
CCL28-201ENST00000361115 RC3H1Q5TC82 1133 aaKnown RBP10.05□□□□□ -0.8
CCL28-201ENST00000361115 TFCP2L1Q9NZI6 479 aa10.05□□□□□ -0.8
CCL28-201ENST00000361115 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
CCL28-201ENST00000361115 FLT4P35916 1363 aa10.04□□□□□ -0.8
CCL28-201ENST00000361115 CCNL1Q9UK58 526 aaPredicted RBP10.04□□□□□ -0.8
CCL28-201ENST00000361115 NRXN2Q9P2S2 1712 aa10.03□□□□□ -0.8
CCL28-201ENST00000361115 A0A0U1RQG5 324 aaPredicted RBP10.03□□□□□ -0.8
CCL28-201ENST00000361115 TOMM70O94826 608 aa10.03□□□□□ -0.8
CCL28-201ENST00000361115 CNKSR2Q8WXI2 1034 aa10.03□□□□□ -0.8
CCL28-201ENST00000361115 NLRP2Q9NX02 1062 aa10.03□□□□□ -0.8
CCL28-201ENST00000361115 ARFGEF2Q9Y6D5 1785 aa10.03□□□□□ -0.8
CCL28-201ENST00000361115 SLC4A3P48751 1232 aa10.03□□□□□ -0.8
CCL28-201ENST00000361115 NUTM2GQ5VZR2 741 aa10.03□□□□□ -0.8
CCL28-201ENST00000361115 A0A1W2PP64 1363 aa10.03□□□□□ -0.8
CCL28-201ENST00000361115 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.8
CCL28-201ENST00000361115 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.8
CCL28-201ENST00000361115 TAF7LQ5H9L4 462 aa10.02□□□□□ -0.8
CCL28-201ENST00000361115 HSP90AB1P08238 724 aaKnown RBP10.02□□□□□ -0.81
CCL28-201ENST00000361115 COG3Q96JB2 828 aa10.02□□□□□ -0.81
CCL28-201ENST00000361115 MS4A1P11836 297 aa10.02□□□□□ -0.81
CCL28-201ENST00000361115 MEGF6O75095 1541 aa10.02□□□□□ -0.81
CCL28-201ENST00000361115 KDM6AO15550 1401 aaPredicted RBP10.01□□□□□ -0.81
CCL28-201ENST00000361115 LRRC4BQ9NT99 713 aa10.01□□□□□ -0.81
CCL28-201ENST00000361115 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
CCL28-201ENST00000361115 CNTNAP4Q9C0A0 1308 aa10.01□□□□□ -0.81
CCL28-201ENST00000361115 PALLDQ8WX93 1383 aa10.01□□□□□ -0.81
CCL28-201ENST00000361115 HOXC9P31274 260 aa10□□□□□ -0.81
CCL28-201ENST00000361115 RGL2O15211 777 aa10□□□□□ -0.81
CCL28-201ENST00000361115 DHX37Q8IY37 1157 aaKnown RBP10□□□□□ -0.81
CCL28-201ENST00000361115 PNISRQ8TF01 805 aaKnown RBP10□□□□□ -0.81
CCL28-201ENST00000361115 KDRP35968 1356 aa10□□□□□ -0.81
CCL28-201ENST00000361115 RAPGEF4Q8WZA2 1011 aa10□□□□□ -0.81
CCL28-201ENST00000361115 RSPH6AQ9H0K4 717 aa10□□□□□ -0.81
CCL28-201ENST00000361115 SPG7Q9UQ90 795 aa10□□□□□ -0.81
CCL28-201ENST00000361115 KAT6BQ8WYB5 2073 aa10□□□□□ -0.81
CCL28-201ENST00000361115 NLGN1Q8N2Q7 840 aa9.99□□□□□ -0.81
CCL28-201ENST00000361115 CHMP4AQ9BY43 222 aa9.99□□□□□ -0.81
CCL28-201ENST00000361115 RGPD2P0DJD1 1756 aa9.99□□□□□ -0.81
CCL28-201ENST00000361115 NBPF1Q3BBV0 1214 aa9.99□□□□□ -0.81
CCL28-201ENST00000361115 DDRGK1Q96HY6 314 aa9.99□□□□□ -0.81
CCL28-201ENST00000361115 CCDC87Q9NVE4 849 aa9.99□□□□□ -0.81
CCL28-201ENST00000361115 PCDH10Q9P2E7 1040 aa9.99□□□□□ -0.81
CCL28-201ENST00000361115 AK7Q96M32 723 aa9.98□□□□□ -0.81
CCL28-201ENST00000361115 FAM43AQ8N2R8 423 aa9.98□□□□□ -0.81
CCL28-201ENST00000361115 POLR3GLQ9BT43 218 aa9.98□□□□□ -0.81
CCL28-201ENST00000361115 COL23A1Q86Y22 540 aaPredicted RBP9.98□□□□□ -0.81
CCL28-201ENST00000361115 ADAMTS7Q9UKP4 1686 aa9.98□□□□□ -0.81
CCL28-201ENST00000361115 IGSF1Q8N6C5 1336 aa9.97□□□□□ -0.81
CCL28-201ENST00000361115 THSD7BQ9C0I4 1608 aa9.97□□□□□ -0.81
CCL28-201ENST00000361115 KIF3CO14782 793 aa9.97□□□□□ -0.81
CCL28-201ENST00000361115 PRELPP51888 382 aa9.97□□□□□ -0.81
CCL28-201ENST00000361115 YBX3P16989 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCL28-201ENST00000361115 RCAN3Q9UKA8 241 aa9.96□□□□□ -0.81
CCL28-201ENST00000361115 MRC1P22897 1456 aa9.96□□□□□ -0.81
CCL28-201ENST00000361115 DICER1Q9UPY3 1922 aaKnown RBP9.96□□□□□ -0.81
CCL28-201ENST00000361115 ERVV-2B6SEH9 535 aa9.96□□□□□ -0.82
CCL28-201ENST00000361115 FRAT2O75474 233 aaPredicted RBP9.96□□□□□ -0.82
CCL28-201ENST00000361115 KLRG1Q96E93 195 aa9.96□□□□□ -0.82
CCL28-201ENST00000361115 TIAM2Q8IVF5 1701 aa9.95□□□□□ -0.82
CCL28-201ENST00000361115 IFNLR1Q8IU57 520 aaPredicted RBP9.95□□□□□ -0.82
CCL28-201ENST00000361115 SMC1BQ8NDV3 1235 aa9.95□□□□□ -0.82
CCL28-201ENST00000361115 TMC1Q8TDI8 760 aa9.95□□□□□ -0.82
CCL28-201ENST00000361115 AMPHP49418 695 aa9.95□□□□□ -0.82
CCL28-201ENST00000361115 PRIM1P49642 420 aaKnown RBP9.94□□□□□ -0.82
CCL28-201ENST00000361115 TJP1Q07157 1748 aa9.94□□□□□ -0.82
CCL28-201ENST00000361115 PLIN1O60240 522 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms