RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 C8orf58Q8NAV2 365 aa32.11■■■□□ 2.73
SHARPIN-201ENST00000359551 VAMP4O75379 141 aa32.11■■■□□ 2.73
SHARPIN-201ENST00000359551 TSPYL6Q8N831 410 aa32.11■■■□□ 2.73
SHARPIN-201ENST00000359551 TWISTNBQ3B726 338 aaPredicted RBP32.09■■■□□ 2.73
SHARPIN-201ENST00000359551 BTBD11A6QL63 1104 aa32.08■■■□□ 2.73
SHARPIN-201ENST00000359551 ERVV-2B6SEH9 535 aa32.08■■■□□ 2.73
SHARPIN-201ENST00000359551 DDB1Q16531 1140 aa32.08■■■□□ 2.73
SHARPIN-201ENST00000359551 ITGB4P16144 1822 aa32.08■■■□□ 2.73
SHARPIN-201ENST00000359551 TRPC5Q9UL62 973 aaPredicted RBP32.08■■■□□ 2.73
SHARPIN-201ENST00000359551 GJD4Q96KN9 370 aaPredicted RBP32.07■■■□□ 2.72
SHARPIN-201ENST00000359551 BCAR3O75815 825 aa32.06■■■□□ 2.72
SHARPIN-201ENST00000359551 FAM98CQ17RN3 349 aaKnown RBP32.06■■■□□ 2.72
SHARPIN-201ENST00000359551 GTF3C3Q9Y5Q9 886 aa32.06■■■□□ 2.72
SHARPIN-201ENST00000359551 NEFLP07196 543 aa32.05■■■□□ 2.72
SHARPIN-201ENST00000359551 KRT24Q2M2I5 525 aa32.05■■■□□ 2.72
SHARPIN-201ENST00000359551 ALDH1L2Q3SY69 923 aa32.05■■■□□ 2.72
SHARPIN-201ENST00000359551 NFATC2IPQ8NCF5 419 aa32.05■■■□□ 2.72
SHARPIN-201ENST00000359551 SOS1Q07889 1333 aaPredicted RBP32.05■■■□□ 2.72
SHARPIN-201ENST00000359551 PAPPAQ13219 1627 aa32.05■■■□□ 2.72
SHARPIN-201ENST00000359551 ELL2O00472 640 aaPredicted RBP32.03■■■□□ 2.72
SHARPIN-201ENST00000359551 CABP4P57796 275 aa32.03■■■□□ 2.72
SHARPIN-201ENST00000359551 EIF4A1P60842 406 aaKnown RBP32.02■■■□□ 2.72
SHARPIN-201ENST00000359551 SSH1Q8WYL5 1049 aa32.02■■■□□ 2.72
SHARPIN-201ENST00000359551 DOT1LQ8TEK3 1739 aa32.02■■■□□ 2.72
SHARPIN-201ENST00000359551 HEG1Q9ULI3 1381 aa32.01■■■□□ 2.71
SHARPIN-201ENST00000359551 UBR2Q8IWV8 1755 aa32.01■■■□□ 2.71
SHARPIN-201ENST00000359551 KCNQ3O43525 872 aa32■■■□□ 2.71
SHARPIN-201ENST00000359551 GOLGA6L2Q8N9W4 650 aaPredicted RBP32■■■□□ 2.71
SHARPIN-201ENST00000359551 CACNA1FO60840 1977 aa32■■■□□ 2.71
SHARPIN-201ENST00000359551 ONECUT3O60422 494 aaPredicted RBP31.99■■■□□ 2.71
SHARPIN-201ENST00000359551 BRPF1P55201 1214 aaPredicted RBP31.99■■■□□ 2.71
SHARPIN-201ENST00000359551 ZNF790Q6PG37 636 aa31.99■■■□□ 2.71
SHARPIN-201ENST00000359551 MARCH10Q8NA82 808 aaPredicted RBP31.98■■■□□ 2.71
SHARPIN-201ENST00000359551 SMC4Q9NTJ3 1288 aa31.98■■■□□ 2.71
SHARPIN-201ENST00000359551 BCL2L13Q9BXK5 485 aa31.97■■■□□ 2.71
SHARPIN-201ENST00000359551 QTRT2Q9H974 415 aaKnown RBP31.97■■■□□ 2.71
SHARPIN-201ENST00000359551 PLIN1O60240 522 aa31.96■■■□□ 2.71
SHARPIN-201ENST00000359551 HOXB7P09629 217 aa31.96■■■□□ 2.71
SHARPIN-201ENST00000359551 FKBP8Q14318 412 aa31.95■■■□□ 2.71
SHARPIN-201ENST00000359551 KAT6BQ8WYB5 2073 aa31.94■■■□□ 2.7
SHARPIN-201ENST00000359551 IRX6P78412 446 aaPredicted RBP31.93■■■□□ 2.7
SHARPIN-201ENST00000359551 SLC39A6Q13433 755 aa31.93■■■□□ 2.7
SHARPIN-201ENST00000359551 ZNF772Q68DY9 489 aaPredicted RBP31.92■■■□□ 2.7
SHARPIN-201ENST00000359551 MRPL50Q8N5N7 158 aaKnown RBP31.92■■■□□ 2.7
SHARPIN-201ENST00000359551 C5P01031 1676 aa31.92■■■□□ 2.7
SHARPIN-201ENST00000359551 TMOD3Q9NYL9 352 aa31.92■■■□□ 2.7
SHARPIN-201ENST00000359551 BCL9O00512 1426 aa31.91■■■□□ 2.7
SHARPIN-201ENST00000359551 KIF16BQ96L93 1317 aa31.91■■■□□ 2.7
SHARPIN-201ENST00000359551 KCPQ6ZWJ8 1503 aa31.9■■■□□ 2.7
SHARPIN-201ENST00000359551 GIGYF1O75420 1035 aaPredicted RBP31.89■■■□□ 2.7
SHARPIN-201ENST00000359551 ERICH6BQ5W0A0 696 aa31.89■■■□□ 2.7
SHARPIN-201ENST00000359551 TTC5Q8N0Z6 440 aa31.89■■■□□ 2.7
SHARPIN-201ENST00000359551 PIGBQ92521 554 aa31.88■■■□□ 2.69
SHARPIN-201ENST00000359551 LAMB4A4D0S4 1761 aa31.88■■■□□ 2.69
SHARPIN-201ENST00000359551 FRAT1Q92837 279 aaPredicted RBP31.87■■■□□ 2.69
SHARPIN-201ENST00000359551 ZNF496Q96IT1 587 aaPredicted RBP31.87■■■□□ 2.69
SHARPIN-201ENST00000359551 CHMP4AQ9BY43 222 aa31.87■■■□□ 2.69
SHARPIN-201ENST00000359551 A0A0G2JS52 829 aa31.86■■■□□ 2.69
SHARPIN-201ENST00000359551 MYT1Q01538 1121 aa31.86■■■□□ 2.69
SHARPIN-201ENST00000359551 PDE3AQ14432 1141 aa31.86■■■□□ 2.69
SHARPIN-201ENST00000359551 CCDC30Q5VVM6 783 aa31.86■■■□□ 2.69
SHARPIN-201ENST00000359551 ZKSCAN2Q63HK3 967 aa31.86■■■□□ 2.69
SHARPIN-201ENST00000359551 FMNL2Q96PY5 1086 aa31.86■■■□□ 2.69
SHARPIN-201ENST00000359551 TCERG1O14776 1098 aaKnown RBP31.85■■■□□ 2.69
SHARPIN-201ENST00000359551 CANXP27824 592 aaKnown RBP31.85■■■□□ 2.69
SHARPIN-201ENST00000359551 C20orf194Q5TEA3 1177 aa31.85■■■□□ 2.69
SHARPIN-201ENST00000359551 BRWD3Q6RI45 1802 aa31.84■■■□□ 2.69
SHARPIN-201ENST00000359551 SEPT12Q8IYM1 358 aa31.84■■■□□ 2.69
SHARPIN-201ENST00000359551 NOB1Q9ULX3 412 aaKnown RBP31.84■■■□□ 2.69
SHARPIN-201ENST00000359551 HDGFL1Q5TGJ6 251 aa31.83■■■□□ 2.69
SHARPIN-201ENST00000359551 ARHGAP45Q92619 1136 aa31.83■■■□□ 2.69
SHARPIN-201ENST00000359551 IPO8O15397 1037 aaKnown RBP31.83■■■□□ 2.69
SHARPIN-201ENST00000359551 PRIM1P49642 420 aaKnown RBP31.83■■■□□ 2.69
SHARPIN-201ENST00000359551 SBF2Q86WG5 1849 aa31.81■■■□□ 2.68
SHARPIN-201ENST00000359551 RBM6P78332 1123 aaKnown RBP31.81■■■□□ 2.68
SHARPIN-201ENST00000359551 ATF7IPQ6VMQ6 1270 aa31.81■■■□□ 2.68
SHARPIN-201ENST00000359551 SNRPA1P09661 255 aaKnown RBP31.8■■■□□ 2.68
SHARPIN-201ENST00000359551 STK31Q9BXU1 1019 aa31.8■■■□□ 2.68
SHARPIN-201ENST00000359551 ATG3Q9NT62 314 aa31.8■■■□□ 2.68
SHARPIN-201ENST00000359551 NHSQ6T4R5 1651 aa31.8■■■□□ 2.68
SHARPIN-201ENST00000359551 TRIM27P14373 513 aa31.8■■■□□ 2.68
SHARPIN-201ENST00000359551 SLC4A2P04920 1241 aa31.79■■■□□ 2.68
SHARPIN-201ENST00000359551 MS4A1P11836 297 aa31.79■■■□□ 2.68
SHARPIN-201ENST00000359551 PRAMEF22A3QJZ6 481 aa31.78■■■□□ 2.68
SHARPIN-201ENST00000359551 ASAP1Q9ULH1 1129 aa31.78■■■□□ 2.68
SHARPIN-201ENST00000359551 SYTL4Q96C24 671 aaPredicted RBP31.77■■■□□ 2.68
SHARPIN-201ENST00000359551 EIF2S2P20042 333 aaKnown RBP31.76■■■□□ 2.68
SHARPIN-201ENST00000359551 TNNQ9UQP3 1299 aa31.76■■■□□ 2.68
SHARPIN-201ENST00000359551 ACSBG1Q96GR2 724 aa31.76■■■□□ 2.67
SHARPIN-201ENST00000359551 CRBNQ96SW2 442 aa31.76■■■□□ 2.67
SHARPIN-201ENST00000359551 PTPRCP08575 1304 aa31.75■■■□□ 2.67
SHARPIN-201ENST00000359551 NECTIN2Q92692 538 aa31.75■■■□□ 2.67
SHARPIN-201ENST00000359551 RLBP1P12271 317 aa31.74■■■□□ 2.67
SHARPIN-201ENST00000359551 DZIP1LQ8IYY4 767 aaKnown RBP31.74■■■□□ 2.67
SHARPIN-201ENST00000359551 PANK1Q8TE04 598 aa31.74■■■□□ 2.67
SHARPIN-201ENST00000359551 RGS17Q9UGC6 210 aaPredicted RBP31.73■■■□□ 2.67
SHARPIN-201ENST00000359551 RGS12O14924 1447 aa31.73■■■□□ 2.67
SHARPIN-201ENST00000359551 VSIG10Q8N0Z9 540 aa31.73■■■□□ 2.67
SHARPIN-201ENST00000359551 EXOC6Q8TAG9 804 aa31.73■■■□□ 2.67
SHARPIN-201ENST00000359551 API5Q9BZZ5 524 aaKnown RBP31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms