RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 ANKRD24Q8TF21 1146 aa19.91■□□□□ 0.78
PTPN5-201ENST00000358540 BMP2KLQ5H9B9 411 aa19.9■□□□□ 0.78
PTPN5-201ENST00000358540 USP54Q70EL1 1684 aa19.9■□□□□ 0.78
PTPN5-201ENST00000358540 HDGFL1Q5TGJ6 251 aa19.89■□□□□ 0.78
PTPN5-201ENST00000358540 C19orf44Q9H6X5 657 aa19.89■□□□□ 0.77
PTPN5-201ENST00000358540 PHAXQ9H814 394 aaKnown RBP19.89■□□□□ 0.77
PTPN5-201ENST00000358540 RGPD2P0DJD1 1756 aa19.88■□□□□ 0.77
PTPN5-201ENST00000358540 RPAP2Q8IXW5 612 aaPredicted RBP19.88■□□□□ 0.77
PTPN5-201ENST00000358540 NAP1L5Q96NT1 182 aaPredicted RBP19.88■□□□□ 0.77
PTPN5-201ENST00000358540 C1orf167Q5SNV9 1468 aa19.88■□□□□ 0.77
PTPN5-201ENST00000358540 ANXA1P04083 346 aa19.87■□□□□ 0.77
PTPN5-201ENST00000358540 GSPT1P15170 499 aaKnown RBP19.87■□□□□ 0.77
PTPN5-201ENST00000358540 PLEKHM2Q8IWE5 1019 aa19.87■□□□□ 0.77
PTPN5-201ENST00000358540 CCT4P50991 539 aaKnown RBP19.87■□□□□ 0.77
PTPN5-201ENST00000358540 LRRC37A3O60309 1634 aa19.87■□□□□ 0.77
PTPN5-201ENST00000358540 TBC1D9Q6ZT07 1266 aa19.87■□□□□ 0.77
PTPN5-201ENST00000358540 CABLES1Q8TDN4 633 aa19.87■□□□□ 0.77
PTPN5-201ENST00000358540 TMEM94Q12767 1356 aa19.86■□□□□ 0.77
PTPN5-201ENST00000358540 ATF3P18847 181 aa19.86■□□□□ 0.77
PTPN5-201ENST00000358540 TEFQ10587 303 aa19.86■□□□□ 0.77
PTPN5-201ENST00000358540 ZMYND15Q9H091 742 aa19.85■□□□□ 0.77
PTPN5-201ENST00000358540 PXDNQ92626 1479 aa19.85■□□□□ 0.77
PTPN5-201ENST00000358540 PLEKHO1Q53GL0 409 aaPredicted RBP19.85■□□□□ 0.77
PTPN5-201ENST00000358540 EXOC6BQ9Y2D4 811 aa19.85■□□□□ 0.77
PTPN5-201ENST00000358540 CEMIPQ8WUJ3 1361 aa19.84■□□□□ 0.77
PTPN5-201ENST00000358540 BTBD11A6QL63 1104 aa19.83■□□□□ 0.77
PTPN5-201ENST00000358540 EIF4A1P60842 406 aaKnown RBP19.83■□□□□ 0.77
PTPN5-201ENST00000358540 C1orf141Q5JVX7 400 aa19.83■□□□□ 0.76
PTPN5-201ENST00000358540 GNAI2P04899 355 aa19.82■□□□□ 0.76
PTPN5-201ENST00000358540 AKAP4Q5JQC9 854 aa19.82■□□□□ 0.76
PTPN5-201ENST00000358540 L1TD1Q5T7N2 865 aaKnown RBP19.82■□□□□ 0.76
PTPN5-201ENST00000358540 DNAJC5Q9H3Z4 198 aa19.82■□□□□ 0.76
PTPN5-201ENST00000358540 CHPF2Q9P2E5 772 aa19.82■□□□□ 0.76
PTPN5-201ENST00000358540 PNMA6EA0A0J9YXQ4 647 aa19.81■□□□□ 0.76
PTPN5-201ENST00000358540 TSHZ3Q63HK5 1081 aa19.81■□□□□ 0.76
PTPN5-201ENST00000358540 NLRP2Q9NX02 1062 aa19.8■□□□□ 0.76
PTPN5-201ENST00000358540 LRRFIP2Q9Y608 721 aaKnown RBP19.8■□□□□ 0.76
PTPN5-201ENST00000358540 RNMTO43148 476 aaKnown RBP19.8■□□□□ 0.76
PTPN5-201ENST00000358540 CHRNA2Q15822 529 aa19.8■□□□□ 0.76
PTPN5-201ENST00000358540 TTC22Q5TAA0 569 aa19.8■□□□□ 0.76
PTPN5-201ENST00000358540 PRAMEF22A3QJZ6 481 aa19.8■□□□□ 0.76
PTPN5-201ENST00000358540 HMMRO75330 724 aa19.8■□□□□ 0.76
PTPN5-201ENST00000358540 FAM208AQ9UK61 1670 aaKnown RBP19.79■□□□□ 0.76
PTPN5-201ENST00000358540 HSP90AA2PQ14568 343 aaPredicted RBP19.79■□□□□ 0.76
PTPN5-201ENST00000358540 SLIT3O75094 1523 aa19.79■□□□□ 0.76
PTPN5-201ENST00000358540 CDC45O75419 566 aa19.79■□□□□ 0.76
PTPN5-201ENST00000358540 BABAM1Q9NWV8 329 aa19.78■□□□□ 0.76
PTPN5-201ENST00000358540 AMOTQ4VCS5 1084 aa19.78■□□□□ 0.76
PTPN5-201ENST00000358540 ERBB3P21860 1342 aa19.78■□□□□ 0.76
PTPN5-201ENST00000358540 MST1RQ04912 1400 aa19.77■□□□□ 0.76
PTPN5-201ENST00000358540 RBM42Q9BTD8 480 aaKnown RBP19.77■□□□□ 0.76
PTPN5-201ENST00000358540 USP44Q9H0E7 712 aa19.77■□□□□ 0.76
PTPN5-201ENST00000358540 CSB-PGBD3P0DP91 1061 aa19.76■□□□□ 0.75
PTPN5-201ENST00000358540 ANTXR1Q9H6X2 564 aa19.76■□□□□ 0.75
PTPN5-201ENST00000358540 HSP90AA1P07900 732 aaKnown RBP19.76■□□□□ 0.75
PTPN5-201ENST00000358540 GNAI3P08754 354 aa19.76■□□□□ 0.75
PTPN5-201ENST00000358540 RBM25P49756 843 aaKnown RBP19.76■□□□□ 0.75
PTPN5-201ENST00000358540 TRPM3Q9HCF6 1732 aaPredicted RBP19.76■□□□□ 0.75
PTPN5-201ENST00000358540 PI4KAP2A4QPH2 592 aa19.76■□□□□ 0.75
PTPN5-201ENST00000358540 SDSP20132 328 aa19.76■□□□□ 0.75
PTPN5-201ENST00000358540 PI4KAP1Q8N8J0 262 aa19.76■□□□□ 0.75
PTPN5-201ENST00000358540 UBTFL1P0CB47 393 aaPredicted RBP19.75■□□□□ 0.75
PTPN5-201ENST00000358540 HSCBQ8IWL3 235 aa19.75■□□□□ 0.75
PTPN5-201ENST00000358540 PROSER3Q2NL68 480 aa19.75■□□□□ 0.75
PTPN5-201ENST00000358540 GZF1Q9H116 711 aaPredicted RBP19.74■□□□□ 0.75
PTPN5-201ENST00000358540 SLC39A6Q13433 755 aa19.74■□□□□ 0.75
PTPN5-201ENST00000358540 MED1Q15648 1581 aaPredicted RBP19.74■□□□□ 0.75
PTPN5-201ENST00000358540 XRCC6P12956 609 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTPN5-201ENST00000358540 KIF2CQ99661 725 aa19.74■□□□□ 0.75
PTPN5-201ENST00000358540 RAPGEF4Q8WZA2 1011 aa19.73■□□□□ 0.75
PTPN5-201ENST00000358540 SRCIN1Q9C0H9 1055 aa19.73■□□□□ 0.75
PTPN5-201ENST00000358540 CD2BP2O95400 341 aaKnown RBP19.73■□□□□ 0.75
PTPN5-201ENST00000358540 STRCP1A6NGW2 1772 aa19.73■□□□□ 0.75
PTPN5-201ENST00000358540 RGPD5Q99666 1765 aa19.72■□□□□ 0.75
PTPN5-201ENST00000358540 ATP8B2P98198 1209 aa19.72■□□□□ 0.75
PTPN5-201ENST00000358540 FOXD4L1Q9NU39 408 aa19.72■□□□□ 0.75
PTPN5-201ENST00000358540 NBPF7P0C2Y1 421 aaPredicted RBP19.72■□□□□ 0.75
PTPN5-201ENST00000358540 SOS1Q07889 1333 aaPredicted RBP19.72■□□□□ 0.75
PTPN5-201ENST00000358540 GOLGA6L3A6NEY3 463 aa19.71■□□□□ 0.75
PTPN5-201ENST00000358540 PANK2Q9BZ23 570 aa19.71■□□□□ 0.75
PTPN5-201ENST00000358540 IL1RAPL2Q9NP60 686 aa19.71■□□□□ 0.75
PTPN5-201ENST00000358540 PHRF1Q9P1Y6 1649 aaKnown RBP19.71■□□□□ 0.75
PTPN5-201ENST00000358540 DNAAF4Q8WXU2 420 aa19.71■□□□□ 0.75
PTPN5-201ENST00000358540 PDE1AP54750 535 aa19.7■□□□□ 0.74
PTPN5-201ENST00000358540 CADPS2Q86UW7 1296 aa19.7■□□□□ 0.74
PTPN5-201ENST00000358540 LRRCC1Q9C099 1032 aa19.7■□□□□ 0.74
PTPN5-201ENST00000358540 GIGYF1O75420 1035 aaPredicted RBP19.69■□□□□ 0.74
PTPN5-201ENST00000358540 AIMP1Q12904 312 aaKnown RBP19.69■□□□□ 0.74
PTPN5-201ENST00000358540 PPP1R42Q7Z4L9 355 aa19.69■□□□□ 0.74
PTPN5-201ENST00000358540 KIF1AQ12756 1690 aa19.69■□□□□ 0.74
PTPN5-201ENST00000358540 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
PTPN5-201ENST00000358540 LMO7Q8WWI1 1683 aa19.68■□□□□ 0.74
PTPN5-201ENST00000358540 NCAPD2Q15021 1401 aa19.68■□□□□ 0.74
PTPN5-201ENST00000358540 BEND3Q5T5X7 828 aa19.68■□□□□ 0.74
PTPN5-201ENST00000358540 RRP9O43818 475 aaKnown RBP19.67■□□□□ 0.74
PTPN5-201ENST00000358540 HSP90AB1P08238 724 aaKnown RBP19.67■□□□□ 0.74
PTPN5-201ENST00000358540 CLCN1P35523 988 aa19.67■□□□□ 0.74
PTPN5-201ENST00000358540 ADCY9O60503 1353 aa19.67■□□□□ 0.74
PTPN5-201ENST00000358540 HOXB7P09629 217 aa19.67■□□□□ 0.74
PTPN5-201ENST00000358540 TATP17735 454 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms