RNA–Protein interactions for RNA: ENST00000358239.8

PPP1CA-202, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2 BASIC

Gene PPP1CA, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-202ENST00000358239 ATG3Q9NT62 314 aa27.58■■■□□ 2.01
PPP1CA-202ENST00000358239 CICQ96RK0 1608 aaPredicted RBP27.57■■■□□ 2
PPP1CA-202ENST00000358239 CABP4P57796 275 aa27.57■■■□□ 2
PPP1CA-202ENST00000358239 U2SURPO15042 1029 aaKnown RBP27.54■■■□□ 2
PPP1CA-202ENST00000358239 MRC1P22897 1456 aa27.54■■■□□ 2
PPP1CA-202ENST00000358239 AK7Q96M32 723 aa27.54■■■□□ 2
PPP1CA-202ENST00000358239 POLD1P28340 1107 aa27.53■■■□□ 2
PPP1CA-202ENST00000358239 PPP2R1AP30153 589 aa27.53■■■□□ 2
PPP1CA-202ENST00000358239 ATP6V1AP38606 617 aa27.53■■■□□ 2
PPP1CA-202ENST00000358239 ARXQ96QS3 562 aa27.53■■■□□ 2
PPP1CA-202ENST00000358239 COL23A1Q86Y22 540 aaPredicted RBP27.52■■■□□ 2
PPP1CA-202ENST00000358239 MAP3K5Q99683 1374 aa27.51■■□□□ 1.99
PPP1CA-202ENST00000358239 MYH14Q7Z406 1995 aaKnown RBP27.5■■□□□ 1.99
PPP1CA-202ENST00000358239 MSH5O43196 834 aa27.5■■□□□ 1.99
PPP1CA-202ENST00000358239 NFATC2IPQ8NCF5 419 aa27.5■■□□□ 1.99
PPP1CA-202ENST00000358239 NUDCQ9Y266 331 aa27.5■■□□□ 1.99
PPP1CA-202ENST00000358239 SIPA1L3O60292 1781 aaPredicted RBP27.5■■□□□ 1.99
PPP1CA-202ENST00000358239 TJP1Q07157 1748 aa27.5■■□□□ 1.99
PPP1CA-202ENST00000358239 DCAF8L1A6NGE4 600 aa27.49■■□□□ 1.99
PPP1CA-202ENST00000358239 MTHFSDQ2M296 383 aaKnown RBP27.49■■□□□ 1.99
PPP1CA-202ENST00000358239 LINC00116Q8NCU8 138 aa27.49■■□□□ 1.99
PPP1CA-202ENST00000358239 UBR2Q8IWV8 1755 aa27.48■■□□□ 1.99
PPP1CA-202ENST00000358239 ITPK1Q13572 414 aa27.48■■□□□ 1.99
PPP1CA-202ENST00000358239 FHDC1Q9C0D6 1143 aaPredicted RBP27.48■■□□□ 1.99
PPP1CA-202ENST00000358239 SSFA2P28290 1259 aa27.47■■□□□ 1.99
PPP1CA-202ENST00000358239 GAS2L2Q8NHY3 880 aa27.46■■□□□ 1.99
PPP1CA-202ENST00000358239 SYT17Q9BSW7 474 aa27.46■■□□□ 1.99
PPP1CA-202ENST00000358239 RBM42Q9BTD8 480 aaKnown RBP27.46■■□□□ 1.99
PPP1CA-202ENST00000358239 SLC52A2Q9HAB3 445 aa27.46■■□□□ 1.99
PPP1CA-202ENST00000358239 RNMTO43148 476 aaKnown RBP27.44■■□□□ 1.98
PPP1CA-202ENST00000358239 CHD4Q14839 1912 aa27.43■■□□□ 1.98
PPP1CA-202ENST00000358239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.43■■□□□ 1.98
PPP1CA-202ENST00000358239 LGR6Q9HBX8 967 aa27.43■■□□□ 1.98
PPP1CA-202ENST00000358239 C4AP0C0L4 1744 aa27.43■■□□□ 1.98
PPP1CA-202ENST00000358239 GNPATO15228 680 aa27.42■■□□□ 1.98
PPP1CA-202ENST00000358239 SLC4A9Q96Q91 983 aa27.42■■□□□ 1.98
PPP1CA-202ENST00000358239 CNTNAP4Q9C0A0 1308 aa27.41■■□□□ 1.98
PPP1CA-202ENST00000358239 PHF14O94880 888 aa27.41■■□□□ 1.98
PPP1CA-202ENST00000358239 RC3H1Q5TC82 1133 aaKnown RBP27.41■■□□□ 1.98
PPP1CA-202ENST00000358239 RSPH6AQ9H0K4 717 aa27.41■■□□□ 1.98
PPP1CA-202ENST00000358239 DLG5Q8TDM6 1919 aa27.4■■□□□ 1.98
PPP1CA-202ENST00000358239 GNAT3A8MTJ3 354 aa27.4■■□□□ 1.98
PPP1CA-202ENST00000358239 PTCD1O75127 700 aaKnown RBP27.39■■□□□ 1.98
PPP1CA-202ENST00000358239 U2AF1L5P0DN76 240 aaPredicted RBP27.39■■□□□ 1.98
PPP1CA-202ENST00000358239 PRKAR2BP31323 418 aa27.39■■□□□ 1.98
PPP1CA-202ENST00000358239 U2AF1Q01081 240 aaKnown RBP eCLIP27.39■■□□□ 1.98
PPP1CA-202ENST00000358239 AMIGO3Q86WK7 504 aa27.39■■□□□ 1.98
PPP1CA-202ENST00000358239 FCHSD2O94868 740 aa27.38■■□□□ 1.97
PPP1CA-202ENST00000358239 RTCBQ9Y3I0 505 aaKnown RBP27.38■■□□□ 1.97
PPP1CA-202ENST00000358239 KCPQ6ZWJ8 1503 aa27.37■■□□□ 1.97
PPP1CA-202ENST00000358239 ADRA2BP18089 450 aa27.37■■□□□ 1.97
PPP1CA-202ENST00000358239 MSL1Q68DK7 614 aa27.36■■□□□ 1.97
PPP1CA-202ENST00000358239 RALBP1Q15311 655 aa27.34■■□□□ 1.97
PPP1CA-202ENST00000358239 TRAPPC3LQ5T215 181 aa27.34■■□□□ 1.97
PPP1CA-202ENST00000358239 PHACTR3Q96KR7 559 aa27.34■■□□□ 1.97
PPP1CA-202ENST00000358239 TEFQ10587 303 aa27.33■■□□□ 1.97
PPP1CA-202ENST00000358239 KLHL34Q8N239 644 aa27.33■■□□□ 1.97
PPP1CA-202ENST00000358239 UTRNP46939 3433 aa27.33■■□□□ 1.97
PPP1CA-202ENST00000358239 RPS6KA4O75676 772 aa27.32■■□□□ 1.96
PPP1CA-202ENST00000358239 ZEB1P37275 1124 aaPredicted RBP27.32■■□□□ 1.96
PPP1CA-202ENST00000358239 CEMIPQ8WUJ3 1361 aa27.32■■□□□ 1.96
PPP1CA-202ENST00000358239 KIF13BQ9NQT8 1826 aa27.32■■□□□ 1.96
PPP1CA-202ENST00000358239 DDX10Q13206 875 aaKnown RBP27.31■■□□□ 1.96
PPP1CA-202ENST00000358239 SMIM5Q71RC9 77 aa27.31■■□□□ 1.96
PPP1CA-202ENST00000358239 CRKLP46109 303 aaKnown RBP27.3■■□□□ 1.96
PPP1CA-202ENST00000358239 VSIG10Q8N0Z9 540 aa27.3■■□□□ 1.96
PPP1CA-202ENST00000358239 IL17REQ8NFR9 667 aa27.3■■□□□ 1.96
PPP1CA-202ENST00000358239 SLC39A6Q13433 755 aa27.29■■□□□ 1.96
PPP1CA-202ENST00000358239 TTC5Q8N0Z6 440 aa27.29■■□□□ 1.96
PPP1CA-202ENST00000358239 NEFMP07197 916 aa27.28■■□□□ 1.96
PPP1CA-202ENST00000358239 CD2APQ9Y5K6 639 aa27.28■■□□□ 1.96
PPP1CA-202ENST00000358239 GOLGB1Q14789 3259 aaKnown RBP27.28■■□□□ 1.96
PPP1CA-202ENST00000358239 RFC4P35249 363 aa27.27■■□□□ 1.96
PPP1CA-202ENST00000358239 ARHGEF1Q92888 912 aaKnown RBP27.27■■□□□ 1.96
PPP1CA-202ENST00000358239 NLGN1Q8N2Q7 840 aa27.26■■□□□ 1.95
PPP1CA-202ENST00000358239 DNAJC10Q8IXB1 793 aa27.25■■□□□ 1.95
PPP1CA-202ENST00000358239 RTF1Q92541 710 aaKnown RBP27.25■■□□□ 1.95
PPP1CA-202ENST00000358239 HTATSF1O43719 755 aaKnown RBP27.24■■□□□ 1.95
PPP1CA-202ENST00000358239 ZNF790Q6PG37 636 aa27.24■■□□□ 1.95
PPP1CA-202ENST00000358239 PNNQ9H307 717 aaKnown RBP27.24■■□□□ 1.95
PPP1CA-202ENST00000358239 CCDC87Q9NVE4 849 aa27.24■■□□□ 1.95
PPP1CA-202ENST00000358239 INTS5Q6P9B9 1019 aaKnown RBP27.23■■□□□ 1.95
PPP1CA-202ENST00000358239 CYP19A1P11511 503 aaPredicted RBP27.22■■□□□ 1.95
PPP1CA-202ENST00000358239 NLGN2Q8NFZ4 835 aa27.22■■□□□ 1.95
PPP1CA-202ENST00000358239 MYBBP1AQ9BQG0 1328 aaKnown RBP27.21■■□□□ 1.95
PPP1CA-202ENST00000358239 GYS1P13807 737 aa27.2■■□□□ 1.94
PPP1CA-202ENST00000358239 GPR162Q16538 588 aa27.2■■□□□ 1.94
PPP1CA-202ENST00000358239 TEX13AQ9BXU3 409 aaPredicted RBP27.2■■□□□ 1.94
PPP1CA-202ENST00000358239 HEG1Q9ULI3 1381 aa27.2■■□□□ 1.94
PPP1CA-202ENST00000358239 BTBD11A6QL63 1104 aa27.19■■□□□ 1.94
PPP1CA-202ENST00000358239 STARD3NLO95772 234 aa27.19■■□□□ 1.94
PPP1CA-202ENST00000358239 MMP10P09238 476 aa27.19■■□□□ 1.94
PPP1CA-202ENST00000358239 YY1P25490 414 aa27.19■■□□□ 1.94
PPP1CA-202ENST00000358239 SOS1Q07889 1333 aaPredicted RBP27.18■■□□□ 1.94
PPP1CA-202ENST00000358239 USP42Q9H9J4 1324 aaKnown RBP27.18■■□□□ 1.94
PPP1CA-202ENST00000358239 KDM3BQ7LBC6 1761 aa27.18■■□□□ 1.94
PPP1CA-202ENST00000358239 ZNF496Q96IT1 587 aaPredicted RBP27.18■■□□□ 1.94
PPP1CA-202ENST00000358239 FMNL2Q96PY5 1086 aa27.18■■□□□ 1.94
PPP1CA-202ENST00000358239 KIAA1551Q9HCM1 1747 aa27.17■■□□□ 1.94
PPP1CA-202ENST00000358239 PLEKHF1Q96S99 279 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms