RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 VPS53Q5VIR6 699 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 ANO2Q9NQ90 1003 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 IFIT2P09913 472 aaKnown RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 PPP1R2P41236 205 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 GNL2Q13823 731 aaKnown RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 TAX1BP1Q86VP1 789 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 GTF2E1P29083 439 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 CASQ1P31415 396 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 ANKRD24Q8TF21 1146 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 RPGRIP1Q96KN7 1286 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 NPHP3Q7Z494 1330 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 ERLIN2O94905 339 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 ZSCAN22P10073 491 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 CDC25BP30305 580 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 FKBP5Q13451 457 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 SYNJ2O15056 1496 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 MAGI1Q96QZ7 1491 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 LAMC3Q9Y6N6 1575 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 RBM6P78332 1123 aaKnown RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 FCHSD1Q86WN1 690 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 PRAG1Q86YV5 1406 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 TOPBP1Q92547 1522 aa4.81□□□□□ -1.64
SYNE2-204ENST00000358025 ZRSR2Q15696 482 aaKnown RBP4.81□□□□□ -1.64
SYNE2-204ENST00000358025 XBP1P17861 261 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 G3BP1Q13283 466 aaKnown RBP eCLIP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 TRHP20396 242 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 UPF3BQ9BZI7 483 aaKnown RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 MED4Q9NPJ6 270 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 CEP131Q9UPN4 1083 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 CCDC148Q8NFR7 591 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 GPR161Q8N6U8 529 aaKnown RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 STX6O43752 255 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 GTF2A1P52655 376 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 PPP2R5BQ15173 497 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 BRMS1Q9HCU9 246 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 SLMAPQ14BN4 828 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 MSL3Q8N5Y2 521 aaKnown RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 ADGRL1O94910 1474 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 SYCE3A1L190 88 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 EVI5LQ96CN4 794 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 CTAGE1Q96RT6 745 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 PRIM1P49642 420 aaKnown RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 C20orf194Q5TEA3 1177 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 IRX3P78415 501 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 CRACR2AQ9BSW2 395 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 IFT140Q96RY7 1462 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 KIF4BQ2VIQ3 1234 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 TMX4Q9H1E5 349 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 GOLIM4O00461 696 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 XPCQ01831 940 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 CPLX1O14810 134 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 SKILP12757 684 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 WASHC4Q2M389 1173 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 TWISTNBQ3B726 338 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-204ENST00000358025 TMEM57Q8N5G2 664 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 ANKRD44Q8N8A2 993 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 ZNF592Q92610 1267 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 LMBRD1Q9NUN5 540 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 IQGAP2Q13576 1575 aa4.8□□□□□ -1.64
SYNE2-204ENST00000358025 SLU7O95391 586 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 PPP2R5EQ16537 467 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 BLOC1S2Q6QNY1 142 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 RUFY1Q96T51 708 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 EXOSC9Q06265 439 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 SART3Q15020 963 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 KIAA1328Q86T90 577 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 RUBCNQ92622 972 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 NAA15Q9BXJ9 866 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 OSBPL3Q9H4L5 887 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 RNF214Q8ND24 703 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 ZNF644Q9H582 1327 aaPredicted RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 OPA1O60313 960 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 RILPL2Q969X0 211 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 HDXQ7Z353 690 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 A0A1B0GUL7 405 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 FMNL3Q8IVF7 1028 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 ASXL2Q76L83 1435 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 ZBTB7BO15156 539 aaPredicted RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 CNPY4Q8N129 248 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 WASF1Q92558 559 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 PANK2Q9BZ23 570 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 RTL1A6NKG5 1358 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 HMGB2P26583 209 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 GPATCH8Q9UKJ3 1502 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 H0YHG0 523 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 CKAP4Q07065 602 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 CCAR1Q8IX12 1150 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 HOMEZQ8IX15 550 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 CCDC191Q8NCU4 936 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 C9orf78Q9NZ63 289 aaPredicted RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 RBM10P98175 930 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 CLUL1Q15846 466 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 TMTC2Q8N394 836 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 AKAP17AQ02040 695 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 DNAJC21Q5F1R6 531 aaKnown RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 BBXQ8WY36 941 aaPredicted RBP4.79□□□□□ -1.64
SYNE2-204ENST00000358025 DDX12PQ92771 950 aa4.79□□□□□ -1.64
SYNE2-204ENST00000358025 IFI16Q16666 785 aaKnown RBP4.78□□□□□ -1.64
SYNE2-204ENST00000358025 TSGA10Q9BZW7 698 aa4.78□□□□□ -1.64
SYNE2-204ENST00000358025 ANKRD36BQ8N2N9 1353 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms