RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 MTHFSP49914 203 aa14.93□□□□□ -0.02
SMC4-202ENST00000357388 TWISTNBQ3B726 338 aaPredicted RBP14.93□□□□□ -0.02
SMC4-202ENST00000357388 ALS2CR12Q96Q35 445 aa14.93□□□□□ -0.02
SMC4-202ENST00000357388 PHAXQ9H814 394 aaKnown RBP14.93□□□□□ -0.02
SMC4-202ENST00000357388 CCDC171Q6TFL3 1326 aa14.93□□□□□ -0.02
SMC4-202ENST00000357388 STK3Q13188 491 aa14.93□□□□□ -0.02
SMC4-202ENST00000357388 KDM4AO75164 1064 aa14.92□□□□□ -0.02
SMC4-202ENST00000357388 YEATS4O95619 227 aa14.92□□□□□ -0.02
SMC4-202ENST00000357388 IRX3P78415 501 aaPredicted RBP14.92□□□□□ -0.02
SMC4-202ENST00000357388 XPCQ01831 940 aaPredicted RBP14.92□□□□□ -0.02
SMC4-202ENST00000357388 ZNF530Q6P9A1 599 aaPredicted RBP14.92□□□□□ -0.02
SMC4-202ENST00000357388 DDX19AQ9NUU7 478 aaKnown RBP14.92□□□□□ -0.02
SMC4-202ENST00000357388 LMAN1P49257 510 aa14.92□□□□□ -0.02
SMC4-202ENST00000357388 EXOSC9Q06265 439 aaKnown RBP14.92□□□□□ -0.02
SMC4-202ENST00000357388 DDX54Q8TDD1 881 aaKnown RBP14.92□□□□□ -0.02
SMC4-202ENST00000357388 SH2B1Q9NRF2 756 aaPredicted RBP14.92□□□□□ -0.02
SMC4-202ENST00000357388 PRKAR2BP31323 418 aa14.92□□□□□ -0.02
SMC4-202ENST00000357388 CCDC150Q8NCX0 1101 aa14.92□□□□□ -0.02
SMC4-202ENST00000357388 ZNF287Q9HBT7 754 aa14.92□□□□□ -0.02
SMC4-202ENST00000357388 PRDM11Q9NQV5 511 aa14.92□□□□□ -0.02
SMC4-202ENST00000357388 CEP112Q8N8E3 955 aa14.91□□□□□ -0.02
SMC4-202ENST00000357388 EHBP1Q8NDI1 1231 aa14.91□□□□□ -0.02
SMC4-202ENST00000357388 TSG101Q99816 390 aa14.91□□□□□ -0.02
SMC4-202ENST00000357388 NOB1Q9ULX3 412 aaKnown RBP14.91□□□□□ -0.02
SMC4-202ENST00000357388 NSRP1Q9H0G5 558 aaKnown RBP14.91□□□□□ -0.02
SMC4-202ENST00000357388 ZNF76P36508 570 aa14.91□□□□□ -0.02
SMC4-202ENST00000357388 ANKLE2Q86XL3 938 aa14.91□□□□□ -0.02
SMC4-202ENST00000357388 BBXQ8WY36 941 aaPredicted RBP14.91□□□□□ -0.02
SMC4-202ENST00000357388 JAKMIP1Q96N16 626 aaKnown RBP14.91□□□□□ -0.02
SMC4-202ENST00000357388 TMEM132EQ6IEE7 984 aa14.9□□□□□ -0.02
SMC4-202ENST00000357388 DAAM2Q86T65 1068 aa14.9□□□□□ -0.02
SMC4-202ENST00000357388 CUX1P39880 1505 aa14.9□□□□□ -0.02
SMC4-202ENST00000357388 TUBB4BP68371 445 aa14.9□□□□□ -0.02
SMC4-202ENST00000357388 TNIP1Q15025 636 aa14.9□□□□□ -0.02
SMC4-202ENST00000357388 UBAC1Q9BSL1 405 aa14.9□□□□□ -0.02
SMC4-202ENST00000357388 ZHX1Q9UKY1 873 aaPredicted RBP14.9□□□□□ -0.02
SMC4-202ENST00000357388 ATF7IPQ6VMQ6 1270 aa14.9□□□□□ -0.02
SMC4-202ENST00000357388 RPAP2Q8IXW5 612 aaPredicted RBP14.9□□□□□ -0.02
SMC4-202ENST00000357388 CEP126Q9P2H0 1117 aa14.9□□□□□ -0.02
SMC4-202ENST00000357388 GSTTP1A0A1W2PQM5 241 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 PPP2R1AP30153 589 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 IGHMBP2P38935 993 aaKnown RBP14.89□□□□□ -0.03
SMC4-202ENST00000357388 HOOK3Q86VS8 718 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.89□□□□□ -0.037e-44■■■■■ 137.4
SMC4-202ENST00000357388 V9GYY5 206 aaPredicted RBP14.89□□□□□ -0.03
SMC4-202ENST00000357388 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 ANKRD50Q9ULJ7 1429 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 SNW1Q13573 536 aaKnown RBP14.89□□□□□ -0.03
SMC4-202ENST00000357388 CCDC178Q5BJE1 867 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 SPECC1Q5M775 1068 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 POGZQ7Z3K3 1410 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 KIF20AO95235 890 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 CLCN1P35523 988 aa14.89□□□□□ -0.03
SMC4-202ENST00000357388 CKAP4Q07065 602 aaKnown RBP14.88□□□□□ -0.03
SMC4-202ENST00000357388 HSF2BPO75031 334 aa14.88□□□□□ -0.03
SMC4-202ENST00000357388 CDCA7LQ96GN5 454 aa14.88□□□□□ -0.03
SMC4-202ENST00000357388 RAI14Q9P0K7 980 aa14.88□□□□□ -0.03
SMC4-202ENST00000357388 NUP133Q8WUM0 1156 aa14.88□□□□□ -0.03
SMC4-202ENST00000357388 ZNF652Q9Y2D9 606 aa14.88□□□□□ -0.03
SMC4-202ENST00000357388 IBSPP21815 317 aaPredicted RBP14.88□□□□□ -0.03
SMC4-202ENST00000357388 MATR3P43243 847 aaKnown RBP eCLIP14.88□□□□□ -0.037e-8■■□□□ 11.8
SMC4-202ENST00000357388 TDO2P48775 406 aa14.88□□□□□ -0.03
SMC4-202ENST00000357388 CACNA2D4Q7Z3S7 1137 aa14.88□□□□□ -0.03
SMC4-202ENST00000357388 ANAPC15P60006 121 aa14.87□□□□□ -0.03
SMC4-202ENST00000357388 CEP135Q66GS9 1140 aa14.87□□□□□ -0.03
SMC4-202ENST00000357388 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
SMC4-202ENST00000357388 GOPCQ9HD26 462 aa14.87□□□□□ -0.03
SMC4-202ENST00000357388 STX1AQ16623 288 aa14.87□□□□□ -0.03
SMC4-202ENST00000357388 SRRTQ9BXP5 876 aaKnown RBP14.87□□□□□ -0.03
SMC4-202ENST00000357388 BCCIPQ9P287 314 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMC4-202ENST00000357388 AKNAQ7Z591 1439 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 PPP4R3AQ6IN85 833 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 TRERF1Q96PN7 1200 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 SLC52A1Q9NWF4 448 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 STARD3NLO95772 234 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 C16orf45Q96MC5 204 aaPredicted RBP14.86□□□□□ -0.03
SMC4-202ENST00000357388 PRAM1Q96QH2 718 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 DHX29Q7Z478 1369 aaKnown RBP14.86□□□□□ -0.03
SMC4-202ENST00000357388 WDR66Q8TBY9 1149 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 FBF1Q8TES7 1133 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 FSD2A1L4K1 749 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 SSBP05455 408 aaKnown RBP eCLIP14.86□□□□□ -0.039e-17■■■■■ 55.5
SMC4-202ENST00000357388 SEPT6Q14141 434 aa14.86□□□□□ -0.03
SMC4-202ENST00000357388 CCDC97Q96F63 343 aaPredicted RBP14.86□□□□□ -0.03
SMC4-202ENST00000357388 PYM1Q9BRP8 204 aaKnown RBP14.86□□□□□ -0.03
SMC4-202ENST00000357388 UBE4AQ14139 1066 aa14.85□□□□□ -0.03
SMC4-202ENST00000357388 OPA1O60313 960 aa14.85□□□□□ -0.03
SMC4-202ENST00000357388 LARP1Q6PKG0 1096 aaKnown RBP14.85□□□□□ -0.03
SMC4-202ENST00000357388 SSR1P43307 286 aaKnown RBP14.85□□□□□ -0.03
SMC4-202ENST00000357388 SULT6B1Q6IMI4 303 aa14.85□□□□□ -0.03
SMC4-202ENST00000357388 CAMK4Q16566 473 aa14.85□□□□□ -0.03
SMC4-202ENST00000357388 LRP2BPQ9P2M1 347 aa14.85□□□□□ -0.03
SMC4-202ENST00000357388 IFI16Q16666 785 aaKnown RBP14.84□□□□□ -0.03
SMC4-202ENST00000357388 DDX46Q7L014 1031 aaKnown RBP14.84□□□□□ -0.03
SMC4-202ENST00000357388 C1orf115Q9H7X2 142 aa14.84□□□□□ -0.03
SMC4-202ENST00000357388 ARHGAP5Q13017 1502 aa14.84□□□□□ -0.03
SMC4-202ENST00000357388 MAATS1Q7Z4T9 603 aa14.84□□□□□ -0.03
SMC4-202ENST00000357388 NUP88Q99567 741 aaPredicted RBP14.84□□□□□ -0.03
SMC4-202ENST00000357388 STMN4Q9H169 189 aaPredicted RBP14.84□□□□□ -0.03
SMC4-202ENST00000357388 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms