RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 ATG3Q9NT62 314 aa14.15□□□□□ -0.14
UBE2D3-206ENST00000357194 IFFO2Q5TF58 517 aa14.14□□□□□ -0.15
UBE2D3-206ENST00000357194 MMP10P09238 476 aa14.13□□□□□ -0.15
UBE2D3-206ENST00000357194 HSPA6P17066 643 aa14.13□□□□□ -0.15
UBE2D3-206ENST00000357194 TNNT2P45379 298 aaPredicted RBP14.12□□□□□ -0.15
UBE2D3-206ENST00000357194 EIF4A2Q14240 407 aaKnown RBP14.12□□□□□ -0.15
UBE2D3-206ENST00000357194 TRAPPC3LQ5T215 181 aa14.12□□□□□ -0.15
UBE2D3-206ENST00000357194 RTCBQ9Y3I0 505 aaKnown RBP14.12□□□□□ -0.15
UBE2D3-206ENST00000357194 SLC4A9Q96Q91 983 aa14.11□□□□□ -0.15
UBE2D3-206ENST00000357194 POLR3GLQ9BT43 218 aa14.11□□□□□ -0.15
UBE2D3-206ENST00000357194 N4BP2Q86UW6 1770 aaPredicted RBP14.1□□□□□ -0.15
UBE2D3-206ENST00000357194 ERVV-2B6SEH9 535 aa14.1□□□□□ -0.15
UBE2D3-206ENST00000357194 NLGN1Q8N2Q7 840 aa14.1□□□□□ -0.15
UBE2D3-206ENST00000357194 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
UBE2D3-206ENST00000357194 KIF13BQ9NQT8 1826 aa14.1□□□□□ -0.15
UBE2D3-206ENST00000357194 KDRP35968 1356 aa14.09□□□□□ -0.15
UBE2D3-206ENST00000357194 KIF3CO14782 793 aa14.09□□□□□ -0.15
UBE2D3-206ENST00000357194 TGFB2P61812 414 aa14.09□□□□□ -0.15
UBE2D3-206ENST00000357194 TRIM26Q12899 539 aaPredicted RBP14.09□□□□□ -0.15
UBE2D3-206ENST00000357194 ARHGEF1Q92888 912 aaKnown RBP14.09□□□□□ -0.15
UBE2D3-206ENST00000357194 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
UBE2D3-206ENST00000357194 PXDNLA1KZ92 1463 aa14.09□□□□□ -0.15
UBE2D3-206ENST00000357194 KIAA1551Q9HCM1 1747 aa14.09□□□□□ -0.15
UBE2D3-206ENST00000357194 PLEKHG2Q9H7P9 1386 aa14.09□□□□□ -0.15
UBE2D3-206ENST00000357194 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.15
UBE2D3-206ENST00000357194 ZNF831Q5JPB2 1677 aa14.08□□□□□ -0.16
UBE2D3-206ENST00000357194 A0A0G2JLW4 131 aa14.08□□□□□ -0.16
UBE2D3-206ENST00000357194 HSP90AB1P08238 724 aaKnown RBP14.08□□□□□ -0.16
UBE2D3-206ENST00000357194 RC3H1Q5TC82 1133 aaKnown RBP14.08□□□□□ -0.16
UBE2D3-206ENST00000357194 DCAF5Q96JK2 942 aa14.08□□□□□ -0.16
UBE2D3-206ENST00000357194 TIMELESSQ9UNS1 1208 aa14.08□□□□□ -0.16
UBE2D3-206ENST00000357194 COL5A3P25940 1745 aaPredicted RBP14.07□□□□□ -0.16
UBE2D3-206ENST00000357194 RPS6KA4O75676 772 aa14.07□□□□□ -0.16
UBE2D3-206ENST00000357194 RFC4P35249 363 aa14.07□□□□□ -0.16
UBE2D3-206ENST00000357194 PLEKHO1Q53GL0 409 aaPredicted RBP14.07□□□□□ -0.16
UBE2D3-206ENST00000357194 GYS1P13807 737 aa14.06□□□□□ -0.16
UBE2D3-206ENST00000357194 CABP4P57796 275 aa14.06□□□□□ -0.16
UBE2D3-206ENST00000357194 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
UBE2D3-206ENST00000357194 PARP3Q9Y6F1 533 aa14.06□□□□□ -0.16
UBE2D3-206ENST00000357194 CNTNAP4Q9C0A0 1308 aa14.06□□□□□ -0.16
UBE2D3-206ENST00000357194 C10orf71Q711Q0 1435 aa14.06□□□□□ -0.16
UBE2D3-206ENST00000357194 C4AP0C0L4 1744 aa14.05□□□□□ -0.16
UBE2D3-206ENST00000357194 DPEP1P16444 411 aa14.05□□□□□ -0.16
UBE2D3-206ENST00000357194 AMOTQ4VCS5 1084 aa14.05□□□□□ -0.16
UBE2D3-206ENST00000357194 ZNF530Q6P9A1 599 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-206ENST00000357194 ARHGAP27Q6ZUM4 889 aa14.05□□□□□ -0.16
UBE2D3-206ENST00000357194 MYH14Q7Z406 1995 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-206ENST00000357194 KDM6AO15550 1401 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-206ENST00000357194 PTCD1O75127 700 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-206ENST00000357194 FCHSD2O94868 740 aa14.04□□□□□ -0.16
UBE2D3-206ENST00000357194 MTHFSP49914 203 aa14.04□□□□□ -0.16
UBE2D3-206ENST00000357194 PANK3Q9H999 370 aa14.04□□□□□ -0.16
UBE2D3-206ENST00000357194 TOMM70O94826 608 aa14.03□□□□□ -0.16
UBE2D3-206ENST00000357194 NFATC2IPQ8NCF5 419 aa14.03□□□□□ -0.16
UBE2D3-206ENST00000357194 BRCA1P38398 1863 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-206ENST00000357194 KCNA3P22001 575 aa14.02□□□□□ -0.17
UBE2D3-206ENST00000357194 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.17
UBE2D3-206ENST00000357194 AEBP1Q8IUX7 1158 aa14.02□□□□□ -0.17
UBE2D3-206ENST00000357194 CRKLP46109 303 aaKnown RBP14.01□□□□□ -0.17
UBE2D3-206ENST00000357194 APLP1P51693 650 aa14.01□□□□□ -0.17
UBE2D3-206ENST00000357194 NMRK2Q9NPI5 230 aa14.01□□□□□ -0.17
UBE2D3-206ENST00000357194 ARFGEF1Q9Y6D6 1849 aa14□□□□□ -0.17
UBE2D3-206ENST00000357194 MORC1Q86VD1 984 aa14□□□□□ -0.17
UBE2D3-206ENST00000357194 PIM2Q9P1W9 311 aa14□□□□□ -0.17
UBE2D3-206ENST00000357194 SRP68Q9UHB9 627 aaKnown RBP14□□□□□ -0.17
UBE2D3-206ENST00000357194 EIF4G2P78344 907 aaKnown RBP eCLIP13.99□□□□□ -0.17
UBE2D3-206ENST00000357194 FKBP8Q14318 412 aa13.99□□□□□ -0.17
UBE2D3-206ENST00000357194 C9orf131Q5VYM1 1079 aa13.99□□□□□ -0.17
UBE2D3-206ENST00000357194 SULT6B1Q6IMI4 303 aa13.99□□□□□ -0.17
UBE2D3-206ENST00000357194 TJP1Q07157 1748 aa13.98□□□□□ -0.17
UBE2D3-206ENST00000357194 USP42Q9H9J4 1324 aaKnown RBP13.98□□□□□ -0.17
UBE2D3-206ENST00000357194 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
UBE2D3-206ENST00000357194 HSPA5P11021 654 aaKnown RBP13.98□□□□□ -0.17
UBE2D3-206ENST00000357194 DALRD3Q5D0E6 543 aaKnown RBP13.98□□□□□ -0.17
UBE2D3-206ENST00000357194 DNAJC5GQ8N7S2 189 aa13.98□□□□□ -0.17
UBE2D3-206ENST00000357194 SCN11AQ9UI33 1791 aa13.97□□□□□ -0.17
UBE2D3-206ENST00000357194 DDR1Q08345 913 aa13.97□□□□□ -0.17
UBE2D3-206ENST00000357194 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-206ENST00000357194 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
UBE2D3-206ENST00000357194 TM4SF1P30408 202 aa13.96□□□□□ -0.17
UBE2D3-206ENST00000357194 CHRNA5P30532 468 aa13.96□□□□□ -0.17
UBE2D3-206ENST00000357194 IL13P35225 146 aa13.96□□□□□ -0.17
UBE2D3-206ENST00000357194 C16orf71Q8IYS4 520 aaPredicted RBP13.96□□□□□ -0.17
UBE2D3-206ENST00000357194 POLRMTO00411 1230 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-206ENST00000357194 RBM46Q8TBY0 533 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-206ENST00000357194 ADAMTS7Q9UKP4 1686 aa13.95□□□□□ -0.18
UBE2D3-206ENST00000357194 ZPR1O75312 459 aa13.94□□□□□ -0.18
UBE2D3-206ENST00000357194 AKAP4Q5JQC9 854 aa13.94□□□□□ -0.18
UBE2D3-206ENST00000357194 USPL1Q5W0Q7 1092 aa13.94□□□□□ -0.18
UBE2D3-206ENST00000357194 DNAJC10Q8IXB1 793 aa13.94□□□□□ -0.18
UBE2D3-206ENST00000357194 SLC52A2Q9HAB3 445 aa13.94□□□□□ -0.18
UBE2D3-206ENST00000357194 LGR6Q9HBX8 967 aa13.94□□□□□ -0.18
UBE2D3-206ENST00000357194 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
UBE2D3-206ENST00000357194 KNSTRNQ9Y448 316 aa13.94□□□□□ -0.18
UBE2D3-206ENST00000357194 KCPQ6ZWJ8 1503 aa13.94□□□□□ -0.18
UBE2D3-206ENST00000357194 KDM2BQ8NHM5 1336 aa13.93□□□□□ -0.18
UBE2D3-206ENST00000357194 SBF1O95248 1867 aa13.93□□□□□ -0.18
UBE2D3-206ENST00000357194 WDR90Q96KV7 1748 aa13.93□□□□□ -0.18
UBE2D3-206ENST00000357194 RRAGCQ9HB90 399 aa13.93□□□□□ -0.18
UBE2D3-206ENST00000357194 SLC39A6Q13433 755 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms