RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 MEX3CQ5U5Q3 659 aaKnown RBP23.05■■□□□ 1.28
CDK11A-202ENST00000356937 SLC52A2Q9HAB3 445 aa23.05■■□□□ 1.28
CDK11A-202ENST00000356937 PPP4R2Q9NY27 417 aa23.05■■□□□ 1.28
CDK11A-202ENST00000356937 NFATC2IPQ8NCF5 419 aa23.04■■□□□ 1.28
CDK11A-202ENST00000356937 NOB1Q9ULX3 412 aaKnown RBP23.04■■□□□ 1.28
CDK11A-202ENST00000356937 DISP2A7MBM2 1401 aa23.04■■□□□ 1.28
CDK11A-202ENST00000356937 SHANK3Q9BYB0 1731 aa23.04■■□□□ 1.28
CDK11A-202ENST00000356937 TNNQ9UQP3 1299 aa23.03■■□□□ 1.28
CDK11A-202ENST00000356937 ZKSCAN2Q63HK3 967 aa23.03■■□□□ 1.28
CDK11A-202ENST00000356937 SPATA31A5Q5VU36 1347 aa23.03■■□□□ 1.28
CDK11A-202ENST00000356937 SPATA31A7Q8IWB4 1347 aa23.03■■□□□ 1.28
CDK11A-202ENST00000356937 SIPA1L3O60292 1781 aaPredicted RBP23.03■■□□□ 1.28
CDK11A-202ENST00000356937 KDM3BQ7LBC6 1761 aa23.02■■□□□ 1.28
CDK11A-202ENST00000356937 MRPL50Q8N5N7 158 aaKnown RBP23.02■■□□□ 1.28
CDK11A-202ENST00000356937 PANK1Q8TE04 598 aa23.02■■□□□ 1.28
CDK11A-202ENST00000356937 CLUAP1Q96AJ1 413 aa23.02■■□□□ 1.28
CDK11A-202ENST00000356937 PDE3AQ14432 1141 aa23.01■■□□□ 1.27
CDK11A-202ENST00000356937 THRAP3Q9Y2W1 955 aaKnown RBP23.01■■□□□ 1.27
CDK11A-202ENST00000356937 KIF16BQ96L93 1317 aa23.01■■□□□ 1.27
CDK11A-202ENST00000356937 BCL9LQ86UU0 1499 aa23.01■■□□□ 1.27
CDK11A-202ENST00000356937 CABP4P57796 275 aa23.01■■□□□ 1.27
CDK11A-202ENST00000356937 EIF4A1P60842 406 aaKnown RBP23.01■■□□□ 1.27
CDK11A-202ENST00000356937 EXOC5O00471 708 aa23■■□□□ 1.27
CDK11A-202ENST00000356937 FNBP4Q8N3X1 1017 aaPredicted RBP23■■□□□ 1.27
CDK11A-202ENST00000356937 WNK3Q9BYP7 1800 aa23■■□□□ 1.27
CDK11A-202ENST00000356937 SLC39A6Q13433 755 aa22.99■■□□□ 1.27
CDK11A-202ENST00000356937 NKX1-1Q15270 411 aaPredicted RBP22.99■■□□□ 1.27
CDK11A-202ENST00000356937 USP21Q9UK80 565 aa22.99■■□□□ 1.27
CDK11A-202ENST00000356937 IPO8O15397 1037 aaKnown RBP22.98■■□□□ 1.27
CDK11A-202ENST00000356937 BRPF1P55201 1214 aaPredicted RBP22.98■■□□□ 1.27
CDK11A-202ENST00000356937 NECTIN2Q92692 538 aa22.98■■□□□ 1.27
CDK11A-202ENST00000356937 RLBP1P12271 317 aa22.98■■□□□ 1.27
CDK11A-202ENST00000356937 TRIM27P14373 513 aa22.98■■□□□ 1.27
CDK11A-202ENST00000356937 B4GALNT3Q6L9W6 998 aa22.98■■□□□ 1.27
CDK11A-202ENST00000356937 ATF7IPQ6VMQ6 1270 aa22.98■■□□□ 1.27
CDK11A-202ENST00000356937 CDCA7Q9BWT1 371 aaPredicted RBP22.98■■□□□ 1.27
CDK11A-202ENST00000356937 COG6Q9Y2V7 657 aa22.98■■□□□ 1.27
CDK11A-202ENST00000356937 FTSJ3Q8IY81 847 aaKnown RBP22.97■■□□□ 1.27
CDK11A-202ENST00000356937 VPS72Q15906 364 aa22.97■■□□□ 1.27
CDK11A-202ENST00000356937 MRC1P22897 1456 aa22.96■■□□□ 1.27
CDK11A-202ENST00000356937 ZNF790Q6PG37 636 aa22.96■■□□□ 1.27
CDK11A-202ENST00000356937 DZIP1LQ8IYY4 767 aaKnown RBP22.96■■□□□ 1.27
CDK11A-202ENST00000356937 KAT6BQ8WYB5 2073 aa22.95■■□□□ 1.26
CDK11A-202ENST00000356937 ERVV-2B6SEH9 535 aa22.95■■□□□ 1.26
CDK11A-202ENST00000356937 SLC4A2P04920 1241 aa22.95■■□□□ 1.26
CDK11A-202ENST00000356937 DDB1Q16531 1140 aa22.94■■□□□ 1.26
CDK11A-202ENST00000356937 BARGINQ6ZT62 677 aa22.94■■□□□ 1.26
CDK11A-202ENST00000356937 SOS1Q07889 1333 aaPredicted RBP22.94■■□□□ 1.26
CDK11A-202ENST00000356937 EIF2S2P20042 333 aaKnown RBP22.94■■□□□ 1.26
CDK11A-202ENST00000356937 CCDC30Q5VVM6 783 aa22.94■■□□□ 1.26
CDK11A-202ENST00000356937 MS4A1P11836 297 aa22.93■■□□□ 1.26
CDK11A-202ENST00000356937 FAM98CQ17RN3 349 aaKnown RBP22.93■■□□□ 1.26
CDK11A-202ENST00000356937 HDGFL1Q5TGJ6 251 aa22.93■■□□□ 1.26
CDK11A-202ENST00000356937 STK31Q9BXU1 1019 aa22.93■■□□□ 1.26
CDK11A-202ENST00000356937 TNS2Q63HR2 1409 aa22.93■■□□□ 1.26
CDK11A-202ENST00000356937 TTC5Q8N0Z6 440 aa22.93■■□□□ 1.26
CDK11A-202ENST00000356937 CCDC136Q96JN2 1154 aa22.93■■□□□ 1.26
CDK11A-202ENST00000356937 AFF2P51816 1311 aa22.93■■□□□ 1.26
CDK11A-202ENST00000356937 ARHGAP45Q92619 1136 aa22.91■■□□□ 1.26
CDK11A-202ENST00000356937 GIGYF1O75420 1035 aaPredicted RBP22.91■■□□□ 1.26
CDK11A-202ENST00000356937 HOXB7P09629 217 aa22.91■■□□□ 1.26
CDK11A-202ENST00000356937 PRAMEF22A3QJZ6 481 aa22.9■■□□□ 1.26
CDK11A-202ENST00000356937 TOGARAM1Q9Y4F4 1720 aa22.9■■□□□ 1.26
CDK11A-202ENST00000356937 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.26
CDK11A-202ENST00000356937 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.89■■□□□ 1.25
CDK11A-202ENST00000356937 ZNF496Q96IT1 587 aaPredicted RBP22.89■■□□□ 1.25
CDK11A-202ENST00000356937 TMOD3Q9NYL9 352 aa22.89■■□□□ 1.25
CDK11A-202ENST00000356937 A0A0G2JS52 829 aa22.88■■□□□ 1.25
CDK11A-202ENST00000356937 MVPQ14764 893 aaKnown RBP22.88■■□□□ 1.25
CDK11A-202ENST00000356937 G2E3Q7L622 706 aa22.88■■□□□ 1.25
CDK11A-202ENST00000356937 TMEM57Q8N5G2 664 aa22.88■■□□□ 1.25
CDK11A-202ENST00000356937 ITPRIPQ8IWB1 547 aa22.88■■□□□ 1.25
CDK11A-202ENST00000356937 API5Q9BZZ5 524 aaKnown RBP22.88■■□□□ 1.25
CDK11A-202ENST00000356937 MARCH10Q8NA82 808 aaPredicted RBP22.86■■□□□ 1.25
CDK11A-202ENST00000356937 FMNL2Q96PY5 1086 aa22.86■■□□□ 1.25
CDK11A-202ENST00000356937 CACNA1FO60840 1977 aa22.86■■□□□ 1.25
CDK11A-202ENST00000356937 CHMP4AQ9BY43 222 aa22.85■■□□□ 1.25
CDK11A-202ENST00000356937 SYTL4Q96C24 671 aaPredicted RBP22.85■■□□□ 1.25
CDK11A-202ENST00000356937 CHPF2Q9P2E5 772 aa22.85■■□□□ 1.25
CDK11A-202ENST00000356937 ITGB4P16144 1822 aa22.85■■□□□ 1.25
CDK11A-202ENST00000356937 PTPRCP08575 1304 aa22.84■■□□□ 1.25
CDK11A-202ENST00000356937 PIGBQ92521 554 aa22.84■■□□□ 1.25
CDK11A-202ENST00000356937 GJD4Q96KN9 370 aaPredicted RBP22.84■■□□□ 1.25
CDK11A-202ENST00000356937 FLIIQ13045 1269 aa22.83■■□□□ 1.25
CDK11A-202ENST00000356937 ABCC4O15439 1325 aa22.83■■□□□ 1.24
CDK11A-202ENST00000356937 SNRPA1P09661 255 aaKnown RBP22.83■■□□□ 1.24
CDK11A-202ENST00000356937 PTCD1O75127 700 aaKnown RBP22.82■■□□□ 1.24
CDK11A-202ENST00000356937 ANXA1P04083 346 aa22.82■■□□□ 1.24
CDK11A-202ENST00000356937 TRPC5Q9UL62 973 aaPredicted RBP22.82■■□□□ 1.24
CDK11A-202ENST00000356937 DDX19BQ9UMR2 479 aa22.82■■□□□ 1.24
CDK11A-202ENST00000356937 C5P01031 1676 aa22.82■■□□□ 1.24
CDK11A-202ENST00000356937 PRIM1P49642 420 aaKnown RBP22.82■■□□□ 1.24
CDK11A-202ENST00000356937 PHAXQ9H814 394 aaKnown RBP22.82■■□□□ 1.24
CDK11A-202ENST00000356937 FKBP5Q13451 457 aaPredicted RBP22.81■■□□□ 1.24
CDK11A-202ENST00000356937 RGS12O14924 1447 aa22.81■■□□□ 1.24
CDK11A-202ENST00000356937 ACSBG1Q96GR2 724 aa22.8■■□□□ 1.24
CDK11A-202ENST00000356937 DBF4Q9UBU7 674 aaPredicted RBP22.8■■□□□ 1.24
CDK11A-202ENST00000356937 ASAP1Q9ULH1 1129 aa22.8■■□□□ 1.24
CDK11A-202ENST00000356937 DOT1LQ8TEK3 1739 aa22.8■■□□□ 1.24
CDK11A-202ENST00000356937 USP16Q9Y5T5 823 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms