RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 SGIP1Q9BQI5 828 aa23.01■■□□□ 1.27
NCL-202ENST00000356936 C4BP0C0L5 1744 aa22.99■■□□□ 1.27
NCL-202ENST00000356936 POLD1P28340 1107 aa22.99■■□□□ 1.27
NCL-202ENST00000356936 GAS2L2Q8NHY3 880 aa22.99■■□□□ 1.27
NCL-202ENST00000356936 RBM42Q9BTD8 480 aaKnown RBP22.99■■□□□ 1.27
NCL-202ENST00000356936 TAF1LQ8IZX4 1826 aa22.98■■□□□ 1.27
NCL-202ENST00000356936 COL23A1Q86Y22 540 aaPredicted RBP22.98■■□□□ 1.27
NCL-202ENST00000356936 ARXQ96QS3 562 aa22.98■■□□□ 1.27
NCL-202ENST00000356936 SLC52A2Q9HAB3 445 aa22.98■■□□□ 1.27
NCL-202ENST00000356936 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
NCL-202ENST00000356936 LINC00116Q8NCU8 138 aa22.97■■□□□ 1.27
NCL-202ENST00000356936 TUBGCP6Q96RT7 1819 aa22.96■■□□□ 1.27
NCL-202ENST00000356936 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
NCL-202ENST00000356936 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.27
NCL-202ENST00000356936 ITPK1Q13572 414 aa22.96■■□□□ 1.27
NCL-202ENST00000356936 LGR6Q9HBX8 967 aa22.96■■□□□ 1.27
NCL-202ENST00000356936 SCN11AQ9UI33 1791 aa22.96■■□□□ 1.27
NCL-202ENST00000356936 DCAF8L1A6NGE4 600 aa22.95■■□□□ 1.26
NCL-202ENST00000356936 FCHSD2O94868 740 aa22.95■■□□□ 1.26
NCL-202ENST00000356936 SSFA2P28290 1259 aa22.95■■□□□ 1.26
NCL-202ENST00000356936 PRKAR2BP31323 418 aa22.95■■□□□ 1.26
NCL-202ENST00000356936 DDX10Q13206 875 aaKnown RBP22.95■■□□□ 1.26
NCL-202ENST00000356936 ZNF831Q5JPB2 1677 aa22.95■■□□□ 1.26
NCL-202ENST00000356936 MAP3K5Q99683 1374 aa22.94■■□□□ 1.26
NCL-202ENST00000356936 GNAT3A8MTJ3 354 aa22.94■■□□□ 1.26
NCL-202ENST00000356936 RALBP1Q15311 655 aa22.94■■□□□ 1.26
NCL-202ENST00000356936 RSPH6AQ9H0K4 717 aa22.94■■□□□ 1.26
NCL-202ENST00000356936 MRC1P22897 1456 aa22.93■■□□□ 1.26
NCL-202ENST00000356936 PTCD1O75127 700 aaKnown RBP22.93■■□□□ 1.26
NCL-202ENST00000356936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.92■■□□□ 1.26
NCL-202ENST00000356936 GNPATO15228 680 aa22.92■■□□□ 1.26
NCL-202ENST00000356936 PHF14O94880 888 aa22.92■■□□□ 1.26
NCL-202ENST00000356936 FHDC1Q9C0D6 1143 aaPredicted RBP22.92■■□□□ 1.26
NCL-202ENST00000356936 RC3H1Q5TC82 1133 aaKnown RBP22.91■■□□□ 1.26
NCL-202ENST00000356936 SLC4A9Q96Q91 983 aa22.91■■□□□ 1.26
NCL-202ENST00000356936 ADAMTS7Q9UKP4 1686 aa22.9■■□□□ 1.26
NCL-202ENST00000356936 CNTNAP4Q9C0A0 1308 aa22.9■■□□□ 1.26
NCL-202ENST00000356936 SYT17Q9BSW7 474 aa22.9■■□□□ 1.26
NCL-202ENST00000356936 COL24A1Q17RW2 1714 aa22.9■■□□□ 1.26
NCL-202ENST00000356936 PHACTR3Q96KR7 559 aa22.89■■□□□ 1.25
NCL-202ENST00000356936 RTCBQ9Y3I0 505 aaKnown RBP22.89■■□□□ 1.25
NCL-202ENST00000356936 NEFMP07197 916 aa22.88■■□□□ 1.25
NCL-202ENST00000356936 TEFQ10587 303 aa22.88■■□□□ 1.25
NCL-202ENST00000356936 UBR3Q6ZT12 1888 aa22.88■■□□□ 1.25
NCL-202ENST00000356936 ADRA2BP18089 450 aa22.87■■□□□ 1.25
NCL-202ENST00000356936 AMIGO3Q86WK7 504 aa22.87■■□□□ 1.25
NCL-202ENST00000356936 TRAPPC3LQ5T215 181 aa22.86■■□□□ 1.25
NCL-202ENST00000356936 MSL1Q68DK7 614 aa22.86■■□□□ 1.25
NCL-202ENST00000356936 PNNQ9H307 717 aaKnown RBP22.86■■□□□ 1.25
NCL-202ENST00000356936 TTC5Q8N0Z6 440 aa22.85■■□□□ 1.25
NCL-202ENST00000356936 IL17REQ8NFR9 667 aa22.85■■□□□ 1.25
NCL-202ENST00000356936 CICQ96RK0 1608 aaPredicted RBP22.84■■□□□ 1.25
NCL-202ENST00000356936 RPS6KA4O75676 772 aa22.84■■□□□ 1.25
NCL-202ENST00000356936 SLC39A6Q13433 755 aa22.84■■□□□ 1.25
NCL-202ENST00000356936 RTF1Q92541 710 aaKnown RBP22.84■■□□□ 1.25
NCL-202ENST00000356936 COL5A3P25940 1745 aaPredicted RBP22.84■■□□□ 1.25
NCL-202ENST00000356936 CRKLP46109 303 aaKnown RBP22.83■■□□□ 1.25
NCL-202ENST00000356936 SMIM5Q71RC9 77 aa22.83■■□□□ 1.25
NCL-202ENST00000356936 VSIG10Q8N0Z9 540 aa22.83■■□□□ 1.25
NCL-202ENST00000356936 KLHL34Q8N239 644 aa22.83■■□□□ 1.25
NCL-202ENST00000356936 CEMIPQ8WUJ3 1361 aa22.83■■□□□ 1.25
NCL-202ENST00000356936 MYBBP1AQ9BQG0 1328 aaKnown RBP22.82■■□□□ 1.24
NCL-202ENST00000356936 HTATSF1O43719 755 aaKnown RBP22.82■■□□□ 1.24
NCL-202ENST00000356936 VIRMAQ69YN4 1812 aaKnown RBP22.81■■□□□ 1.24
NCL-202ENST00000356936 RFC4P35249 363 aa22.8■■□□□ 1.24
NCL-202ENST00000356936 ZNF790Q6PG37 636 aa22.8■■□□□ 1.24
NCL-202ENST00000356936 KCPQ6ZWJ8 1503 aa22.8■■□□□ 1.24
NCL-202ENST00000356936 DNAJC10Q8IXB1 793 aa22.79■■□□□ 1.24
NCL-202ENST00000356936 ARHGEF1Q92888 912 aaKnown RBP22.79■■□□□ 1.24
NCL-202ENST00000356936 TJP1Q07157 1748 aa22.79■■□□□ 1.24
NCL-202ENST00000356936 NLGN1Q8N2Q7 840 aa22.78■■□□□ 1.24
NCL-202ENST00000356936 CCDC87Q9NVE4 849 aa22.78■■□□□ 1.24
NCL-202ENST00000356936 BTBD11A6QL63 1104 aa22.77■■□□□ 1.24
NCL-202ENST00000356936 TEX13AQ9BXU3 409 aaPredicted RBP22.77■■□□□ 1.24
NCL-202ENST00000356936 CD2APQ9Y5K6 639 aa22.77■■□□□ 1.24
NCL-202ENST00000356936 MAPK8IP3Q9UPT6 1336 aa22.77■■□□□ 1.24
NCL-202ENST00000356936 STARD3NLO95772 234 aa22.76■■□□□ 1.23
NCL-202ENST00000356936 CYP19A1P11511 503 aaPredicted RBP22.76■■□□□ 1.23
NCL-202ENST00000356936 INTS5Q6P9B9 1019 aaKnown RBP22.76■■□□□ 1.23
NCL-202ENST00000356936 PLEKHF1Q96S99 279 aa22.76■■□□□ 1.23
NCL-202ENST00000356936 MCM10Q7L590 875 aa22.75■■□□□ 1.23
NCL-202ENST00000356936 FMNL2Q96PY5 1086 aa22.75■■□□□ 1.23
NCL-202ENST00000356936 UBR2Q8IWV8 1755 aa22.75■■□□□ 1.23
NCL-202ENST00000356936 ZNF496Q96IT1 587 aaPredicted RBP22.74■■□□□ 1.23
NCL-202ENST00000356936 HEG1Q9ULI3 1381 aa22.74■■□□□ 1.23
NCL-202ENST00000356936 SIPA1L3O60292 1781 aaPredicted RBP22.73■■□□□ 1.23
NCL-202ENST00000356936 MMP10P09238 476 aa22.72■■□□□ 1.23
NCL-202ENST00000356936 GYS1P13807 737 aa22.72■■□□□ 1.23
NCL-202ENST00000356936 NFE2L2Q16236 605 aa22.72■■□□□ 1.23
NCL-202ENST00000356936 NLGN2Q8NFZ4 835 aa22.72■■□□□ 1.23
NCL-202ENST00000356936 PRKRIP1Q9H875 184 aaPredicted RBP22.72■■□□□ 1.23
NCL-202ENST00000356936 MYH14Q7Z406 1995 aaKnown RBP22.72■■□□□ 1.23
NCL-202ENST00000356936 GPR162Q16538 588 aa22.71■■□□□ 1.23
NCL-202ENST00000356936 SOS1Q07889 1333 aaPredicted RBP22.71■■□□□ 1.23
NCL-202ENST00000356936 USP42Q9H9J4 1324 aaKnown RBP22.71■■□□□ 1.23
NCL-202ENST00000356936 ZPR1O75312 459 aa22.7■■□□□ 1.22
NCL-202ENST00000356936 DCTN1Q14203 1278 aa22.7■■□□□ 1.22
NCL-202ENST00000356936 WDR43Q15061 677 aaKnown RBP eCLIP22.69■■□□□ 1.229e-49■□□□□ 8.6
NCL-202ENST00000356936 TAF7Q15545 349 aaPredicted RBP22.69■■□□□ 1.22
NCL-202ENST00000356936 PNISRQ8TF01 805 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms