RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 WNK3Q9BYP7 1800 aa17.47■□□□□ 0.39
HOXA1-202ENST00000355633 MRPL50Q8N5N7 158 aaKnown RBP17.46■□□□□ 0.39
HOXA1-202ENST00000355633 SLC52A2Q9HAB3 445 aa17.46■□□□□ 0.39
HOXA1-202ENST00000355633 NOB1Q9ULX3 412 aaKnown RBP17.46■□□□□ 0.39
HOXA1-202ENST00000355633 MRC1P22897 1456 aa17.45■□□□□ 0.38
HOXA1-202ENST00000355633 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
HOXA1-202ENST00000355633 C8orf37Q96NL8 207 aa17.45■□□□□ 0.38
HOXA1-202ENST00000355633 SOS1Q07889 1333 aaPredicted RBP17.45■□□□□ 0.38
HOXA1-202ENST00000355633 IPO8O15397 1037 aaKnown RBP17.45■□□□□ 0.38
HOXA1-202ENST00000355633 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
HOXA1-202ENST00000355633 LRP6O75581 1613 aa17.44■□□□□ 0.38
HOXA1-202ENST00000355633 SPATA31A1Q5TZJ5 1347 aa17.44■□□□□ 0.38
HOXA1-202ENST00000355633 MS4A1P11836 297 aa17.44■□□□□ 0.38
HOXA1-202ENST00000355633 DDX54Q8TDD1 881 aaKnown RBP17.44■□□□□ 0.38
HOXA1-202ENST00000355633 PANK1Q8TE04 598 aa17.44■□□□□ 0.38
HOXA1-202ENST00000355633 THRAP3Q9Y2W1 955 aaKnown RBP17.44■□□□□ 0.38
HOXA1-202ENST00000355633 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
HOXA1-202ENST00000355633 ATF7IPQ6VMQ6 1270 aa17.43■□□□□ 0.38
HOXA1-202ENST00000355633 TNNQ9UQP3 1299 aa17.43■□□□□ 0.38
HOXA1-202ENST00000355633 NKX1-1Q15270 411 aaPredicted RBP17.43■□□□□ 0.38
HOXA1-202ENST00000355633 UNC5CLQ8IV45 518 aa17.43■□□□□ 0.38
HOXA1-202ENST00000355633 CLUAP1Q96AJ1 413 aa17.43■□□□□ 0.38
HOXA1-202ENST00000355633 KCNQ3O43525 872 aa17.42■□□□□ 0.38
HOXA1-202ENST00000355633 TRIM27P14373 513 aa17.42■□□□□ 0.38
HOXA1-202ENST00000355633 B4GALNT3Q6L9W6 998 aa17.42■□□□□ 0.38
HOXA1-202ENST00000355633 FTSJ3Q8IY81 847 aaKnown RBP17.42■□□□□ 0.38
HOXA1-202ENST00000355633 DZIP1LQ8IYY4 767 aaKnown RBP17.42■□□□□ 0.38
HOXA1-202ENST00000355633 NFATC2IPQ8NCF5 419 aa17.42■□□□□ 0.38
HOXA1-202ENST00000355633 CCDC9Q9Y3X0 531 aaKnown RBP17.42■□□□□ 0.38
HOXA1-202ENST00000355633 SPATA31A5Q5VU36 1347 aa17.42■□□□□ 0.38
HOXA1-202ENST00000355633 SPATA31A7Q8IWB4 1347 aa17.42■□□□□ 0.38
HOXA1-202ENST00000355633 RLBP1P12271 317 aa17.42■□□□□ 0.38
HOXA1-202ENST00000355633 CDCA7Q9BWT1 371 aaPredicted RBP17.42■□□□□ 0.38
HOXA1-202ENST00000355633 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
HOXA1-202ENST00000355633 CABP4P57796 275 aa17.41■□□□□ 0.38
HOXA1-202ENST00000355633 CCDC136Q96JN2 1154 aa17.41■□□□□ 0.38
HOXA1-202ENST00000355633 FNBP4Q8N3X1 1017 aaPredicted RBP17.4■□□□□ 0.38
HOXA1-202ENST00000355633 ARHGAP45Q92619 1136 aa17.4■□□□□ 0.38
HOXA1-202ENST00000355633 BCL9LQ86UU0 1499 aa17.4■□□□□ 0.38
HOXA1-202ENST00000355633 EXOC5O00471 708 aa17.4■□□□□ 0.38
HOXA1-202ENST00000355633 CCDC30Q5VVM6 783 aa17.4■□□□□ 0.38
HOXA1-202ENST00000355633 TNS2Q63HR2 1409 aa17.39■□□□□ 0.37
HOXA1-202ENST00000355633 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.37
HOXA1-202ENST00000355633 HOXB7P09629 217 aa17.39■□□□□ 0.37
HOXA1-202ENST00000355633 MEX3CQ5U5Q3 659 aaKnown RBP17.39■□□□□ 0.37
HOXA1-202ENST00000355633 ZNF790Q6PG37 636 aa17.39■□□□□ 0.37
HOXA1-202ENST00000355633 STK31Q9BXU1 1019 aa17.38■□□□□ 0.37
HOXA1-202ENST00000355633 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
HOXA1-202ENST00000355633 SLC39A6Q13433 755 aa17.38■□□□□ 0.37
HOXA1-202ENST00000355633 VPS72Q15906 364 aa17.38■□□□□ 0.37
HOXA1-202ENST00000355633 BARGINQ6ZT62 677 aa17.38■□□□□ 0.37
HOXA1-202ENST00000355633 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
HOXA1-202ENST00000355633 HDGFL1Q5TGJ6 251 aa17.37■□□□□ 0.37
HOXA1-202ENST00000355633 CHMP4AQ9BY43 222 aa17.37■□□□□ 0.37
HOXA1-202ENST00000355633 HEG1Q9ULI3 1381 aa17.37■□□□□ 0.37
HOXA1-202ENST00000355633 TOGARAM1Q9Y4F4 1720 aa17.37■□□□□ 0.37
HOXA1-202ENST00000355633 MVPQ14764 893 aaKnown RBP17.37■□□□□ 0.37
HOXA1-202ENST00000355633 API5Q9BZZ5 524 aaKnown RBP17.37■□□□□ 0.37
HOXA1-202ENST00000355633 USP21Q9UK80 565 aa17.37■□□□□ 0.37
HOXA1-202ENST00000355633 CACNA1FO60840 1977 aa17.36■□□□□ 0.37
HOXA1-202ENST00000355633 TTC5Q8N0Z6 440 aa17.36■□□□□ 0.37
HOXA1-202ENST00000355633 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
HOXA1-202ENST00000355633 GIGYF1O75420 1035 aaPredicted RBP17.35■□□□□ 0.37
HOXA1-202ENST00000355633 DDB1Q16531 1140 aa17.35■□□□□ 0.37
HOXA1-202ENST00000355633 PTPRCP08575 1304 aa17.35■□□□□ 0.37
HOXA1-202ENST00000355633 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
HOXA1-202ENST00000355633 TMEM57Q8N5G2 664 aa17.35■□□□□ 0.37
HOXA1-202ENST00000355633 ITPRIPQ8IWB1 547 aa17.34■□□□□ 0.37
HOXA1-202ENST00000355633 ABCC4O15439 1325 aa17.33■□□□□ 0.37
HOXA1-202ENST00000355633 AAMPQ13685 434 aa17.33■□□□□ 0.37
HOXA1-202ENST00000355633 ZNF496Q96IT1 587 aaPredicted RBP17.33■□□□□ 0.36
HOXA1-202ENST00000355633 DDX19BQ9UMR2 479 aa17.33■□□□□ 0.36
HOXA1-202ENST00000355633 G2E3Q7L622 706 aa17.32■□□□□ 0.36
HOXA1-202ENST00000355633 FMNL2Q96PY5 1086 aa17.32■□□□□ 0.36
HOXA1-202ENST00000355633 TMOD3Q9NYL9 352 aa17.32■□□□□ 0.36
HOXA1-202ENST00000355633 PAPPAQ13219 1627 aa17.32■□□□□ 0.36
HOXA1-202ENST00000355633 C5P01031 1676 aa17.32■□□□□ 0.36
HOXA1-202ENST00000355633 FAM98CQ17RN3 349 aaKnown RBP17.31■□□□□ 0.36
HOXA1-202ENST00000355633 ITGB4P16144 1822 aa17.31■□□□□ 0.36
HOXA1-202ENST00000355633 RGS12O14924 1447 aa17.31■□□□□ 0.36
HOXA1-202ENST00000355633 AFF2P51816 1311 aa17.31■□□□□ 0.36
HOXA1-202ENST00000355633 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
HOXA1-202ENST00000355633 UBR2Q8IWV8 1755 aa17.3■□□□□ 0.36
HOXA1-202ENST00000355633 FLIIQ13045 1269 aa17.3■□□□□ 0.36
HOXA1-202ENST00000355633 CHPF2Q9P2E5 772 aa17.3■□□□□ 0.36
HOXA1-202ENST00000355633 SNRPA1P09661 255 aaKnown RBP17.3■□□□□ 0.36
HOXA1-202ENST00000355633 DBF4Q9UBU7 674 aaPredicted RBP17.29■□□□□ 0.36
HOXA1-202ENST00000355633 DOT1LQ8TEK3 1739 aa17.28■□□□□ 0.36
HOXA1-202ENST00000355633 GLI3P10071 1580 aa17.28■□□□□ 0.36
HOXA1-202ENST00000355633 FKBP5Q13451 457 aaPredicted RBP17.28■□□□□ 0.36
HOXA1-202ENST00000355633 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
HOXA1-202ENST00000355633 MARCH10Q8NA82 808 aaPredicted RBP17.27■□□□□ 0.36
HOXA1-202ENST00000355633 PIGBQ92521 554 aa17.27■□□□□ 0.36
HOXA1-202ENST00000355633 CHMP4BQ9H444 224 aaKnown RBP17.27■□□□□ 0.36
HOXA1-202ENST00000355633 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
HOXA1-202ENST00000355633 LAMB4A4D0S4 1761 aa17.27■□□□□ 0.35
HOXA1-202ENST00000355633 INTS3Q68E01 1043 aaKnown RBP17.26■□□□□ 0.35
HOXA1-202ENST00000355633 KAT6BQ8WYB5 2073 aa17.26■□□□□ 0.35
HOXA1-202ENST00000355633 BCL9O00512 1426 aa17.26■□□□□ 0.35
HOXA1-202ENST00000355633 A0A0G2JS52 829 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms